RNA–Protein interactions for RNA: ENST00000481460.1

TRAPPC10-209, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-209ENST00000481460 RGPD4Q7Z3J3 1758 aa8.44□□□□□ -1.06
TRAPPC10-209ENST00000481460 GRIN3BO60391 1043 aa8.44□□□□□ -1.06
TRAPPC10-209ENST00000481460 FXR2P51116 673 aaKnown RBP eCLIP8.44□□□□□ -1.06
TRAPPC10-209ENST00000481460 KLHL34Q8N239 644 aa8.44□□□□□ -1.06
TRAPPC10-209ENST00000481460 AMOTL2Q9Y2J4 779 aa8.44□□□□□ -1.06
TRAPPC10-209ENST00000481460 TNRC18O15417 2968 aaPredicted RBP8.44□□□□□ -1.06
TRAPPC10-209ENST00000481460 PTPRUQ92729 1446 aa8.44□□□□□ -1.06
TRAPPC10-209ENST00000481460 EHBP1L1Q8N3D4 1523 aa8.44□□□□□ -1.06
TRAPPC10-209ENST00000481460 HSPA1AP0DMV8 641 aaKnown RBP8.43□□□□□ -1.06
TRAPPC10-209ENST00000481460 HSPA1BP0DMV9 641 aaKnown RBP8.43□□□□□ -1.06
TRAPPC10-209ENST00000481460 FAM98CQ17RN3 349 aaKnown RBP8.43□□□□□ -1.06
TRAPPC10-209ENST00000481460 ARXQ96QS3 562 aa8.43□□□□□ -1.06
TRAPPC10-209ENST00000481460 TOMM70O94826 608 aa8.42□□□□□ -1.06
TRAPPC10-209ENST00000481460 PLEKHG5O94827 1062 aa8.42□□□□□ -1.06
TRAPPC10-209ENST00000481460 MTFR1LQ9H019 292 aa8.42□□□□□ -1.06
TRAPPC10-209ENST00000481460 ANO8Q9HCE9 1232 aaPredicted RBP8.42□□□□□ -1.06
TRAPPC10-209ENST00000481460 CFDP1Q9UEE9 299 aaPredicted RBP8.42□□□□□ -1.06
TRAPPC10-209ENST00000481460 ATP1B4Q9UN42 357 aaPredicted RBP8.42□□□□□ -1.06
TRAPPC10-209ENST00000481460 XRN1Q8IZH2 1706 aaKnown RBP8.41□□□□□ -1.06
TRAPPC10-209ENST00000481460 PXDNQ92626 1479 aa8.41□□□□□ -1.06
TRAPPC10-209ENST00000481460 SPOCK2Q92563 424 aa8.41□□□□□ -1.06
TRAPPC10-209ENST00000481460 ORAI2Q96SN7 254 aa8.41□□□□□ -1.06
TRAPPC10-209ENST00000481460 CCDC9Q9Y3X0 531 aaKnown RBP8.41□□□□□ -1.06
TRAPPC10-209ENST00000481460 CUL9Q8IWT3 2517 aa8.41□□□□□ -1.06
TRAPPC10-209ENST00000481460 USP19O94966 1318 aa8.4□□□□□ -1.06
TRAPPC10-209ENST00000481460 A0A0G2JS52 829 aa8.4□□□□□ -1.06
TRAPPC10-209ENST00000481460 HDGFP51858 240 aaKnown RBP8.4□□□□□ -1.06
TRAPPC10-209ENST00000481460 CHADLQ6NUI6 762 aa8.4□□□□□ -1.06
TRAPPC10-209ENST00000481460 NRAPQ86VF7 1730 aa8.4□□□□□ -1.07
TRAPPC10-209ENST00000481460 EIF2AK4Q9P2K8 1649 aaKnown RBP8.4□□□□□ -1.07
TRAPPC10-209ENST00000481460 ADGRL2O95490 1459 aa8.39□□□□□ -1.07
TRAPPC10-209ENST00000481460 RANGAP1P46060 587 aaPredicted RBP8.39□□□□□ -1.07
TRAPPC10-209ENST00000481460 HTRA3P83110 453 aa8.39□□□□□ -1.07
TRAPPC10-209ENST00000481460 PIP4P2Q8N4L2 257 aa8.39□□□□□ -1.07
TRAPPC10-209ENST00000481460 ZBTB47Q9UFB7 747 aaPredicted RBP8.39□□□□□ -1.07
TRAPPC10-209ENST00000481460 NALCNQ8IZF0 1738 aa8.39□□□□□ -1.07
TRAPPC10-209ENST00000481460 FYCO1Q9BQS8 1478 aa8.38□□□□□ -1.07
TRAPPC10-209ENST00000481460 PLSCR1O15162 318 aa8.38□□□□□ -1.07
TRAPPC10-209ENST00000481460 MYO5BQ9ULV0 1848 aa8.38□□□□□ -1.07
TRAPPC10-209ENST00000481460 ARHGEF28Q8N1W1 1705 aaKnown RBP8.37□□□□□ -1.07
TRAPPC10-209ENST00000481460 NPHP3Q7Z494 1330 aa8.37□□□□□ -1.07
TRAPPC10-209ENST00000481460 PRKAR2AP13861 404 aaKnown RBP8.37□□□□□ -1.07
TRAPPC10-209ENST00000481460 YBX3P16989 372 aaKnown RBP eCLIP8.37□□□□□ -1.076e-6■□□□□ 10.8
TRAPPC10-209ENST00000481460 PRDM10Q9NQV6 1147 aa8.37□□□□□ -1.07
TRAPPC10-209ENST00000481460 ZNF644Q9H582 1327 aaPredicted RBP8.36□□□□□ -1.07
TRAPPC10-209ENST00000481460 NUBP1P53384 320 aa8.36□□□□□ -1.07
TRAPPC10-209ENST00000481460 RSPH4AQ5TD94 716 aa8.36□□□□□ -1.07
TRAPPC10-209ENST00000481460 ZNF526Q8TF50 670 aaPredicted RBP8.36□□□□□ -1.07
TRAPPC10-209ENST00000481460 COL24A1Q17RW2 1714 aa8.36□□□□□ -1.07
TRAPPC10-209ENST00000481460 RIMS2Q9UQ26 1411 aa8.36□□□□□ -1.07
TRAPPC10-209ENST00000481460 SPATA31A5Q5VU36 1347 aa8.35□□□□□ -1.07
TRAPPC10-209ENST00000481460 SPATA31A7Q8IWB4 1347 aa8.35□□□□□ -1.07
TRAPPC10-209ENST00000481460 ABHD8Q96I13 439 aa8.35□□□□□ -1.07
TRAPPC10-209ENST00000481460 SLC52A1Q9NWF4 448 aa8.35□□□□□ -1.07
TRAPPC10-209ENST00000481460 CCDC18Q5T9S5 1454 aa8.34□□□□□ -1.07
TRAPPC10-209ENST00000481460 SUPT5HO00267 1087 aaKnown RBP8.34□□□□□ -1.07
TRAPPC10-209ENST00000481460 RBM46Q8TBY0 533 aaKnown RBP8.34□□□□□ -1.07
TRAPPC10-209ENST00000481460 FARP1Q9Y4F1 1045 aaPredicted RBP8.34□□□□□ -1.07
TRAPPC10-209ENST00000481460 CCDC141Q6ZP82 1450 aa8.33□□□□□ -1.08
TRAPPC10-209ENST00000481460 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.33□□□□□ -1.08
TRAPPC10-209ENST00000481460 SPATA31A3Q5VYP0 1347 aa8.32□□□□□ -1.08
TRAPPC10-209ENST00000481460 CHGAP10645 457 aaKnown RBP8.32□□□□□ -1.08
TRAPPC10-209ENST00000481460 FSTL1Q12841 308 aa8.32□□□□□ -1.08
TRAPPC10-209ENST00000481460 SLC15A2Q16348 729 aa8.31□□□□□ -1.08
TRAPPC10-209ENST00000481460 CCNB3Q8WWL7 1395 aa8.31□□□□□ -1.08
TRAPPC10-209ENST00000481460 NLGN2Q8NFZ4 835 aa8.3□□□□□ -1.08
TRAPPC10-209ENST00000481460 BCL11AQ9H165 835 aa8.3□□□□□ -1.08
TRAPPC10-209ENST00000481460 ABCA3Q99758 1704 aa8.29□□□□□ -1.08
TRAPPC10-209ENST00000481460 SBF2Q86WG5 1849 aa8.29□□□□□ -1.08
TRAPPC10-209ENST00000481460 DAXXQ9UER7 740 aaPredicted RBP8.29□□□□□ -1.08
TRAPPC10-209ENST00000481460 TULP4Q9NRJ4 1543 aa8.29□□□□□ -1.08
TRAPPC10-209ENST00000481460 RRBP1Q9P2E9 1410 aaKnown RBP8.29□□□□□ -1.08
TRAPPC10-209ENST00000481460 PITPNM2Q9BZ72 1349 aa8.29□□□□□ -1.08
TRAPPC10-209ENST00000481460 LRPPRCP42704 1394 aaKnown RBP8.28□□□□□ -1.08
TRAPPC10-209ENST00000481460 C11orf95C9JLR9 678 aaPredicted RBP8.28□□□□□ -1.08
TRAPPC10-209ENST00000481460 FOXO3O43524 673 aa8.28□□□□□ -1.08
TRAPPC10-209ENST00000481460 RASEFQ8IZ41 740 aa8.28□□□□□ -1.08
TRAPPC10-209ENST00000481460 BCL11BQ9C0K0 894 aaPredicted RBP8.28□□□□□ -1.08
TRAPPC10-209ENST00000481460 GCC2Q8IWJ2 1684 aa8.27□□□□□ -1.08
TRAPPC10-209ENST00000481460 BTG4Q9NY30 223 aa8.27□□□□□ -1.09
TRAPPC10-209ENST00000481460 STK32BQ9NY57 414 aa8.27□□□□□ -1.09
TRAPPC10-209ENST00000481460 LMTK2Q8IWU2 1503 aa8.27□□□□□ -1.09
TRAPPC10-209ENST00000481460 ARHGEF5Q12774 1597 aa8.27□□□□□ -1.09
TRAPPC10-209ENST00000481460 A0A0C4DFX4 3053 aa8.26□□□□□ -1.09
TRAPPC10-209ENST00000481460 NRXN3Q9Y4C0 1643 aa8.26□□□□□ -1.09
TRAPPC10-209ENST00000481460 COL14A1Q05707 1796 aaKnown RBP8.26□□□□□ -1.09
TRAPPC10-209ENST00000481460 DLL1O00548 723 aa8.26□□□□□ -1.09
TRAPPC10-209ENST00000481460 XPCQ01831 940 aaPredicted RBP8.26□□□□□ -1.09
TRAPPC10-209ENST00000481460 SPATA31A1Q5TZJ5 1347 aa8.26□□□□□ -1.09
TRAPPC10-209ENST00000481460 FOXN1O15353 648 aa8.25□□□□□ -1.09
TRAPPC10-209ENST00000481460 PRPF38BQ5VTL8 546 aaKnown RBP8.25□□□□□ -1.09
TRAPPC10-209ENST00000481460 CIZ1Q9ULV3 898 aaPredicted RBP8.25□□□□□ -1.09
TRAPPC10-209ENST00000481460 DHX57Q6P158 1386 aaKnown RBP8.24□□□□□ -1.09
TRAPPC10-209ENST00000481460 PEAK1Q9H792 1746 aa8.24□□□□□ -1.09
TRAPPC10-209ENST00000481460 PRAG1Q86YV5 1406 aa8.24□□□□□ -1.09
TRAPPC10-209ENST00000481460 CASKIN1Q8WXD9 1431 aa8.24□□□□□ -1.09
TRAPPC10-209ENST00000481460 ESCO1Q5FWF5 840 aa8.24□□□□□ -1.09
TRAPPC10-209ENST00000481460 DCAF8Q5TAQ9 597 aa8.24□□□□□ -1.09
TRAPPC10-209ENST00000481460 CABLES1Q8TDN4 633 aa8.24□□□□□ -1.09
TRAPPC10-209ENST00000481460 TSPY4P0CV99 314 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms