RNA–Protein interactions for RNA: ENST00000481453.5

MRPL28-209, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 2

Gene MRPL28, Length 2,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-209ENST00000481453 CCDC61Q9Y6R9 512 aa24.18■■□□□ 1.46
MRPL28-209ENST00000481453 PTCH1Q13635 1447 aa24.18■■□□□ 1.46
MRPL28-209ENST00000481453 ZNF142P52746 1687 aaPredicted RBP24.17■■□□□ 1.46
MRPL28-209ENST00000481453 ITSN1Q15811 1721 aa24.17■■□□□ 1.46
MRPL28-209ENST00000481453 XRN1Q8IZH2 1706 aaKnown RBP24.17■■□□□ 1.46
MRPL28-209ENST00000481453 SLFN5Q08AF3 891 aa24.17■■□□□ 1.46
MRPL28-209ENST00000481453 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.17■■□□□ 1.46
MRPL28-209ENST00000481453 TRMT2AQ8IZ69 625 aaKnown RBP24.17■■□□□ 1.46
MRPL28-209ENST00000481453 RUNDC1Q96C34 613 aa24.16■■□□□ 1.46
MRPL28-209ENST00000481453 AMOTL2Q9Y2J4 779 aa24.16■■□□□ 1.46
MRPL28-209ENST00000481453 SPINK5Q9NQ38 1064 aaPredicted RBP24.15■■□□□ 1.46
MRPL28-209ENST00000481453 PNPLA6Q8IY17 1366 aa24.14■■□□□ 1.45
MRPL28-209ENST00000481453 DMRT2Q9Y5R5 561 aa24.14■■□□□ 1.45
MRPL28-209ENST00000481453 EXOC6Q8TAG9 804 aa24.11■■□□□ 1.45
MRPL28-209ENST00000481453 NRKQ7Z2Y5 1582 aa24.11■■□□□ 1.45
MRPL28-209ENST00000481453 NKTRP30414 1462 aaKnown RBP24.1■■□□□ 1.45
MRPL28-209ENST00000481453 WWC1Q8IX03 1113 aa24.1■■□□□ 1.45
MRPL28-209ENST00000481453 TCP11L2Q8N4U5 519 aa24.1■■□□□ 1.45
MRPL28-209ENST00000481453 PHF23Q9BUL5 403 aaPredicted RBP24.1■■□□□ 1.45
MRPL28-209ENST00000481453 NME9Q86XW9 330 aa24.1■■□□□ 1.45
MRPL28-209ENST00000481453 U2AF1L5P0DN76 240 aaPredicted RBP24.09■■□□□ 1.45
MRPL28-209ENST00000481453 U2AF1Q01081 240 aaKnown RBP eCLIP24.09■■□□□ 1.45
MRPL28-209ENST00000481453 E9PSI1 815 aa24.07■■□□□ 1.44
MRPL28-209ENST00000481453 ZRANB1Q9UGI0 708 aa24.07■■□□□ 1.44
MRPL28-209ENST00000481453 FBLN1P23142 703 aa24.07■■□□□ 1.44
MRPL28-209ENST00000481453 POLKQ9UBT6 870 aa24.07■■□□□ 1.44
MRPL28-209ENST00000481453 RRP7AQ9Y3A4 280 aaKnown RBP24.07■■□□□ 1.44
MRPL28-209ENST00000481453 MAP2P11137 1827 aaKnown RBP24.06■■□□□ 1.44
MRPL28-209ENST00000481453 PLEKHG3A1L390 1219 aa24.06■■□□□ 1.44
MRPL28-209ENST00000481453 ZNF692Q9BU19 519 aaPredicted RBP24.06■■□□□ 1.44
MRPL28-209ENST00000481453 PIK3R4Q99570 1358 aa24.06■■□□□ 1.44
MRPL28-209ENST00000481453 PLIN1O60240 522 aa24.04■■□□□ 1.44
MRPL28-209ENST00000481453 PLEKHF1Q96S99 279 aa24.04■■□□□ 1.44
MRPL28-209ENST00000481453 NCBP3Q53F19 620 aaKnown RBP24.04■■□□□ 1.44
MRPL28-209ENST00000481453 ACEP12821 1306 aa24.03■■□□□ 1.44
MRPL28-209ENST00000481453 AATKQ6ZMQ8 1374 aa24.03■■□□□ 1.44
MRPL28-209ENST00000481453 NUTM2FA1L443 756 aa24.03■■□□□ 1.44
MRPL28-209ENST00000481453 DIAPH1O60610 1272 aaKnown RBP24.03■■□□□ 1.44
MRPL28-209ENST00000481453 NEUROD2Q15784 382 aa24.03■■□□□ 1.44
MRPL28-209ENST00000481453 CCDC27Q2M243 656 aa24.03■■□□□ 1.44
MRPL28-209ENST00000481453 SETD1BQ9UPS6 1966 aaKnown RBP24.02■■□□□ 1.44
MRPL28-209ENST00000481453 U2SURPO15042 1029 aaKnown RBP24.02■■□□□ 1.44
MRPL28-209ENST00000481453 KCNA6P17658 529 aa24.02■■□□□ 1.44
MRPL28-209ENST00000481453 NOP58Q9Y2X3 529 aaKnown RBP24.02■■□□□ 1.44
MRPL28-209ENST00000481453 USP6P35125 1406 aa24.01■■□□□ 1.43
MRPL28-209ENST00000481453 ANP32AP39687 249 aaKnown RBP24■■□□□ 1.43
MRPL28-209ENST00000481453 ANKLE2Q86XL3 938 aa24■■□□□ 1.43
MRPL28-209ENST00000481453 CDK12Q9NYV4 1490 aaPredicted RBP24■■□□□ 1.43
MRPL28-209ENST00000481453 RGPD8O14715 1765 aaPredicted RBP24■■□□□ 1.43
MRPL28-209ENST00000481453 CHD2O14647 1828 aaKnown RBP24■■□□□ 1.43
MRPL28-209ENST00000481453 SSH2Q76I76 1423 aa24■■□□□ 1.43
MRPL28-209ENST00000481453 EMILIN1Q9Y6C2 1016 aa23.99■■□□□ 1.43
MRPL28-209ENST00000481453 TTC21BQ7Z4L5 1316 aa23.99■■□□□ 1.43
MRPL28-209ENST00000481453 COG3Q96JB2 828 aa23.99■■□□□ 1.43
MRPL28-209ENST00000481453 WDR63Q8IWG1 891 aa23.98■■□□□ 1.43
MRPL28-209ENST00000481453 OVOS2A0A0J9YW53 1432 aa23.97■■□□□ 1.43
MRPL28-209ENST00000481453 OVOS2Q6IE36 1432 aa23.97■■□□□ 1.43
MRPL28-209ENST00000481453 LRRC7Q96NW7 1537 aa23.97■■□□□ 1.43
MRPL28-209ENST00000481453 NALCNQ8IZF0 1738 aa23.96■■□□□ 1.43
MRPL28-209ENST00000481453 FMN2Q9NZ56 1722 aa23.96■■□□□ 1.43
MRPL28-209ENST00000481453 PPM1GO15355 546 aaPredicted RBP23.95■■□□□ 1.42
MRPL28-209ENST00000481453 C20orf194Q5TEA3 1177 aa23.95■■□□□ 1.42
MRPL28-209ENST00000481453 TCERG1O14776 1098 aaKnown RBP23.95■■□□□ 1.42
MRPL28-209ENST00000481453 TMPOP42166 694 aaKnown RBP23.94■■□□□ 1.42
MRPL28-209ENST00000481453 IPO9Q96P70 1041 aaKnown RBP23.94■■□□□ 1.42
MRPL28-209ENST00000481453 CRBNQ96SW2 442 aa23.94■■□□□ 1.42
MRPL28-209ENST00000481453 ANKARQ7Z5J8 1434 aa23.93■■□□□ 1.42
MRPL28-209ENST00000481453 PAK3O75914 559 aaPredicted RBP23.92■■□□□ 1.42
MRPL28-209ENST00000481453 IL13P35225 146 aa23.92■■□□□ 1.42
MRPL28-209ENST00000481453 RRS1Q15050 365 aaKnown RBP23.92■■□□□ 1.42
MRPL28-209ENST00000481453 RSPH6AQ9H0K4 717 aa23.91■■□□□ 1.42
MRPL28-209ENST00000481453 FCHSD2O94868 740 aa23.91■■□□□ 1.42
MRPL28-209ENST00000481453 PMFBP1Q8TBY8 1022 aa23.91■■□□□ 1.42
MRPL28-209ENST00000481453 TRIM35Q9UPQ4 493 aa23.91■■□□□ 1.42
MRPL28-209ENST00000481453 MAPK8IP3Q9UPT6 1336 aa23.9■■□□□ 1.42
MRPL28-209ENST00000481453 NPHP4O75161 1426 aaPredicted RBP23.89■■□□□ 1.41
MRPL28-209ENST00000481453 USP31Q70CQ4 1352 aa23.88■■□□□ 1.41
MRPL28-209ENST00000481453 BCAR3O75815 825 aa23.88■■□□□ 1.41
MRPL28-209ENST00000481453 PNNQ9H307 717 aaKnown RBP23.88■■□□□ 1.41
MRPL28-209ENST00000481453 TTC21AQ8NDW8 1320 aa23.87■■□□□ 1.41
MRPL28-209ENST00000481453 PEAK1Q9H792 1746 aa23.87■■□□□ 1.41
MRPL28-209ENST00000481453 PIK3C2AO00443 1686 aa23.86■■□□□ 1.41
MRPL28-209ENST00000481453 PRKAR2BP31323 418 aa23.86■■□□□ 1.41
MRPL28-209ENST00000481453 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.86■■□□□ 1.41
MRPL28-209ENST00000481453 ZBTB47Q9UFB7 747 aaPredicted RBP23.86■■□□□ 1.41
MRPL28-209ENST00000481453 MS4A1P11836 297 aa23.84■■□□□ 1.41
MRPL28-209ENST00000481453 NGDNQ8NEJ9 315 aaKnown RBP23.84■■□□□ 1.41
MRPL28-209ENST00000481453 HMOX1P09601 288 aa23.83■■□□□ 1.41
MRPL28-209ENST00000481453 PDE4AP27815 886 aa23.83■■□□□ 1.41
MRPL28-209ENST00000481453 RIPK4P57078 832 aa23.83■■□□□ 1.41
MRPL28-209ENST00000481453 MYH16Q9H6N6 1097 aa23.83■■□□□ 1.41
MRPL28-209ENST00000481453 PHACTR3Q96KR7 559 aa23.82■■□□□ 1.4
MRPL28-209ENST00000481453 ADGRL3Q9HAR2 1447 aa23.81■■□□□ 1.4
MRPL28-209ENST00000481453 MARF1Q9Y4F3 1742 aaKnown RBP23.81■■□□□ 1.4
MRPL28-209ENST00000481453 NWD1Q149M9 1564 aa23.81■■□□□ 1.4
MRPL28-209ENST00000481453 IL16Q14005 1332 aa23.8■■□□□ 1.4
MRPL28-209ENST00000481453 RARSP54136 660 aaKnown RBP23.8■■□□□ 1.4
MRPL28-209ENST00000481453 RBM33Q96EV2 1170 aaKnown RBP23.8■■□□□ 1.4
MRPL28-209ENST00000481453 BACH2Q9BYV9 841 aa23.8■■□□□ 1.4
MRPL28-209ENST00000481453 USP54Q70EL1 1684 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms