RNA–Protein interactions for RNA: ENST00000481353.5

PDCD4-206, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 1,120 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-206ENST00000481353 BRICD5Q6PL45 260 aa13.57□□□□□ -0.24
PDCD4-206ENST00000481353 SLC6A16Q9GZN6 736 aa13.57□□□□□ -0.24
PDCD4-206ENST00000481353 CFAP99D6REC4 459 aa13.56□□□□□ -0.24
PDCD4-206ENST00000481353 HDGFL1Q5TGJ6 251 aa13.56□□□□□ -0.24
PDCD4-206ENST00000481353 ADAMTS19Q8TE59 1207 aa13.56□□□□□ -0.24
PDCD4-206ENST00000481353 RANGAP1P46060 587 aaPredicted RBP13.55□□□□□ -0.24
PDCD4-206ENST00000481353 PDE4CQ08493 712 aa13.55□□□□□ -0.24
PDCD4-206ENST00000481353 LIAT1Q6ZQX7 453 aa13.55□□□□□ -0.24
PDCD4-206ENST00000481353 SYMPKQ92797 1274 aaKnown RBP13.55□□□□□ -0.24
PDCD4-206ENST00000481353 IRX2Q9BZI1 471 aaPredicted RBP13.55□□□□□ -0.24
PDCD4-206ENST00000481353 ACIN1Q9UKV3 1341 aaKnown RBP13.55□□□□□ -0.24
PDCD4-206ENST00000481353 LRRN4Q8WUT4 740 aa13.54□□□□□ -0.24
PDCD4-206ENST00000481353 PBXIP1Q96AQ6 731 aa13.53□□□□□ -0.24
PDCD4-206ENST00000481353 C6orf229H3BNL8 230 aa13.52□□□□□ -0.25
PDCD4-206ENST00000481353 LCE2BO14633 110 aa13.51□□□□□ -0.25
PDCD4-206ENST00000481353 GGCXP38435 758 aa13.51□□□□□ -0.25
PDCD4-206ENST00000481353 ANKLE1Q8NAG6 615 aa13.51□□□□□ -0.25
PDCD4-206ENST00000481353 FMNL1O95466 1100 aaPredicted RBP13.5□□□□□ -0.25
PDCD4-206ENST00000481353 TRIM67Q6ZTA4 783 aa13.5□□□□□ -0.25
PDCD4-206ENST00000481353 AEBP1Q8IUX7 1158 aa13.5□□□□□ -0.25
PDCD4-206ENST00000481353 TSC1Q92574 1164 aa13.5□□□□□ -0.25
PDCD4-206ENST00000481353 VAC14Q08AM6 782 aa13.49□□□□□ -0.25
PDCD4-206ENST00000481353 CFAP70Q5T0N1 1121 aa13.49□□□□□ -0.25
PDCD4-206ENST00000481353 NPM2Q86SE8 214 aaKnown RBP13.49□□□□□ -0.25
PDCD4-206ENST00000481353 ALG2Q9H553 416 aa13.49□□□□□ -0.25
PDCD4-206ENST00000481353 V9GY48 417 aaPredicted RBP13.49□□□□□ -0.25
PDCD4-206ENST00000481353 SOX11P35716 441 aa13.47□□□□□ -0.25
PDCD4-206ENST00000481353 SLC19A1P41440 591 aa13.47□□□□□ -0.25
PDCD4-206ENST00000481353 SRPK2P78362 688 aaKnown RBP13.47□□□□□ -0.25
PDCD4-206ENST00000481353 PPP1R12CQ9BZL4 782 aa13.47□□□□□ -0.25
PDCD4-206ENST00000481353 FCF1Q9Y324 198 aaKnown RBP13.47□□□□□ -0.25
PDCD4-206ENST00000481353 SALL2Q9Y467 1007 aaPredicted RBP13.47□□□□□ -0.25
PDCD4-206ENST00000481353 PRR7Q8TB68 274 aa13.46□□□□□ -0.25
PDCD4-206ENST00000481353 EPS8L1Q8TE68 723 aa13.46□□□□□ -0.25
PDCD4-206ENST00000481353 DESI1Q6ICB0 168 aa13.44□□□□□ -0.26
PDCD4-206ENST00000481353 RETREG3Q86VR2 466 aa13.44□□□□□ -0.26
PDCD4-206ENST00000481353 USTQ9Y2C2 406 aa13.44□□□□□ -0.26
PDCD4-206ENST00000481353 MSS51Q4VC12 460 aa13.43□□□□□ -0.26
PDCD4-206ENST00000481353 SPRYD7Q5W111 196 aa13.43□□□□□ -0.26
PDCD4-206ENST00000481353 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.42□□□□□ -0.26
PDCD4-206ENST00000481353 GFRA3O60609 400 aa13.42□□□□□ -0.26
PDCD4-206ENST00000481353 PALM3A6NDB9 673 aaPredicted RBP13.41□□□□□ -0.26
PDCD4-206ENST00000481353 NR6A1Q15406 480 aa13.41□□□□□ -0.26
PDCD4-206ENST00000481353 PER1O15534 1290 aaPredicted RBP13.4□□□□□ -0.26
PDCD4-206ENST00000481353 RFX1P22670 979 aa13.4□□□□□ -0.26
PDCD4-206ENST00000481353 USB1Q9BQ65 265 aaKnown RBP13.4□□□□□ -0.26
PDCD4-206ENST00000481353 PATL2C9JE40 543 aaKnown RBP13.39□□□□□ -0.27
PDCD4-206ENST00000481353 Q3C1V9 767 aa13.39□□□□□ -0.27
PDCD4-206ENST00000481353 UCN2Q96RP3 112 aa13.39□□□□□ -0.27
PDCD4-206ENST00000481353 MMP16P51512 607 aa13.38□□□□□ -0.27
PDCD4-206ENST00000481353 DXOO77932 396 aaKnown RBP13.37□□□□□ -0.27
PDCD4-206ENST00000481353 PNMA1Q8ND90 353 aa13.37□□□□□ -0.27
PDCD4-206ENST00000481353 PDZRN3Q9UPQ7 1066 aa13.37□□□□□ -0.27
PDCD4-206ENST00000481353 CSB-PGBD3P0DP91 1061 aa13.36□□□□□ -0.27
PDCD4-206ENST00000481353 ZNF697Q5TEC3 545 aa13.36□□□□□ -0.27
PDCD4-206ENST00000481353 BRD1O95696 1058 aa13.35□□□□□ -0.27
PDCD4-206ENST00000481353 SEMA3FQ13275 785 aa13.35□□□□□ -0.27
PDCD4-206ENST00000481353 LYPD8Q6UX82 237 aa13.35□□□□□ -0.27
PDCD4-206ENST00000481353 ZNF598Q86UK7 904 aaKnown RBP13.35□□□□□ -0.27
PDCD4-206ENST00000481353 TFIP11Q9UBB9 837 aaKnown RBP13.35□□□□□ -0.27
PDCD4-206ENST00000481353 TNFRSF10AO00220 468 aa13.34□□□□□ -0.27
PDCD4-206ENST00000481353 LMOD1P29536 600 aaPredicted RBP13.34□□□□□ -0.27
PDCD4-206ENST00000481353 Q6ZNB5 142 aa13.34□□□□□ -0.27
PDCD4-206ENST00000481353 EIF4G2P78344 907 aaKnown RBP eCLIP13.33□□□□□ -0.28
PDCD4-206ENST00000481353 PKD2L1Q9P0L9 805 aa13.33□□□□□ -0.28
PDCD4-206ENST00000481353 GDF9O60383 454 aa13.32□□□□□ -0.28
PDCD4-206ENST00000481353 KCNA1Q09470 495 aa13.32□□□□□ -0.28
PDCD4-206ENST00000481353 GZF1Q9H116 711 aaPredicted RBP13.32□□□□□ -0.28
PDCD4-206ENST00000481353 TMCO4Q5TGY1 634 aa13.31□□□□□ -0.28
PDCD4-206ENST00000481353 MAFBQ9Y5Q3 323 aaPredicted RBP13.31□□□□□ -0.28
PDCD4-206ENST00000481353 NRG2O14511 850 aaPredicted RBP13.3□□□□□ -0.28
PDCD4-206ENST00000481353 ATG7O95352 703 aa13.3□□□□□ -0.28
PDCD4-206ENST00000481353 NR1H3Q13133 447 aa13.3□□□□□ -0.28
PDCD4-206ENST00000481353 JUNDP17535 347 aa13.28□□□□□ -0.28
PDCD4-206ENST00000481353 PTCRAQ6ISU1 281 aaPredicted RBP13.28□□□□□ -0.28
PDCD4-206ENST00000481353 FOXC1Q12948 553 aa13.27□□□□□ -0.29
PDCD4-206ENST00000481353 ATP9BO43861 1147 aa13.26□□□□□ -0.29
PDCD4-206ENST00000481353 TBC1D9Q6ZT07 1266 aa13.26□□□□□ -0.29
PDCD4-206ENST00000481353 CCDC24Q8N4L8 307 aa13.26□□□□□ -0.29
PDCD4-206ENST00000481353 ZC3H4Q9UPT8 1303 aaKnown RBP13.26□□□□□ -0.29
PDCD4-206ENST00000481353 F12P00748 615 aaPredicted RBP13.25□□□□□ -0.29
PDCD4-206ENST00000481353 FBXO45P0C2W1 286 aa13.25□□□□□ -0.29
PDCD4-206ENST00000481353 RPIAP49247 311 aa13.25□□□□□ -0.29
PDCD4-206ENST00000481353 FKBPLQ9UIM3 349 aa13.25□□□□□ -0.29
PDCD4-206ENST00000481353 ZCCHC6Q5VYS8 1495 aaKnown RBP13.24□□□□□ -0.29
PDCD4-206ENST00000481353 ZBBXA8MT70 800 aa13.24□□□□□ -0.29
PDCD4-206ENST00000481353 RGS22Q8NE09 1264 aa13.24□□□□□ -0.29
PDCD4-206ENST00000481353 TMEM88BA6NKF7 163 aa13.23□□□□□ -0.29
PDCD4-206ENST00000481353 MFAP1P55081 439 aaKnown RBP13.23□□□□□ -0.29
PDCD4-206ENST00000481353 TRIM32Q13049 653 aa13.23□□□□□ -0.29
PDCD4-206ENST00000481353 NFATC2IPQ8NCF5 419 aa13.23□□□□□ -0.29
PDCD4-206ENST00000481353 SHROOM4Q9ULL8 1493 aa13.23□□□□□ -0.29
PDCD4-206ENST00000481353 SKOR1P84550 965 aa13.22□□□□□ -0.29
PDCD4-206ENST00000481353 PRR20EP86478 221 aa13.22□□□□□ -0.29
PDCD4-206ENST00000481353 PRR20CP86479 221 aa13.22□□□□□ -0.29
PDCD4-206ENST00000481353 PRR20DP86480 221 aa13.22□□□□□ -0.29
PDCD4-206ENST00000481353 PRR20BP86481 221 aa13.22□□□□□ -0.29
PDCD4-206ENST00000481353 PRR20AP86496 221 aa13.22□□□□□ -0.29
PDCD4-206ENST00000481353 LAPTM4AQ15012 233 aa13.21□□□□□ -0.29
PDCD4-206ENST00000481353 PTPRNQ16849 979 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms