RNA–Protein interactions for RNA: ENST00000481152.2

CHCHD3-205, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 2

Gene CHCHD3, Length 1,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-205ENST00000481152 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.33□□□□□ -0.92
CHCHD3-205ENST00000481152 PRKCSHP14314 528 aaPredicted RBP9.32□□□□□ -0.92
CHCHD3-205ENST00000481152 MAP10Q9P2G4 905 aa9.32□□□□□ -0.92
CHCHD3-205ENST00000481152 SH3BP2P78314 561 aa9.31□□□□□ -0.92
CHCHD3-205ENST00000481152 FBXO31Q5XUX0 539 aaPredicted RBP9.31□□□□□ -0.92
CHCHD3-205ENST00000481152 ATP1B4Q9UN42 357 aaPredicted RBP9.31□□□□□ -0.92
CHCHD3-205ENST00000481152 TTC24A2A3L6 582 aaPredicted RBP9.3□□□□□ -0.92
CHCHD3-205ENST00000481152 LINC01559Q495D7 138 aa9.3□□□□□ -0.92
CHCHD3-205ENST00000481152 IL27Q8NEV9 243 aa9.3□□□□□ -0.92
CHCHD3-205ENST00000481152 SNIP1Q8TAD8 396 aaKnown RBP9.3□□□□□ -0.92
CHCHD3-205ENST00000481152 BAP1Q92560 729 aa9.3□□□□□ -0.92
CHCHD3-205ENST00000481152 MYT1Q01538 1121 aa9.29□□□□□ -0.92
CHCHD3-205ENST00000481152 PPP2R2DQ66LE6 453 aa9.29□□□□□ -0.92
CHCHD3-205ENST00000481152 ZNF511Q8NB15 262 aa9.28□□□□□ -0.92
CHCHD3-205ENST00000481152 EHBP1Q8NDI1 1231 aa9.28□□□□□ -0.92
CHCHD3-205ENST00000481152 GOPCQ9HD26 462 aa9.28□□□□□ -0.92
CHCHD3-205ENST00000481152 SMPD1P17405 629 aa9.26□□□□□ -0.93
CHCHD3-205ENST00000481152 CTDSPL2Q05D32 466 aa9.26□□□□□ -0.93
CHCHD3-205ENST00000481152 J3QL48 77 aa9.25□□□□□ -0.93
CHCHD3-205ENST00000481152 PCMTD1Q96MG8 357 aaPredicted RBP9.25□□□□□ -0.93
CHCHD3-205ENST00000481152 SIAH2O43255 324 aa9.24□□□□□ -0.93
CHCHD3-205ENST00000481152 AVPP01185 164 aa9.24□□□□□ -0.93
CHCHD3-205ENST00000481152 ST8SIA5O15466 376 aa9.23□□□□□ -0.93
CHCHD3-205ENST00000481152 AP1G2O75843 785 aa9.23□□□□□ -0.93
CHCHD3-205ENST00000481152 ALDH1A1P00352 501 aa9.23□□□□□ -0.93
CHCHD3-205ENST00000481152 CRIPAKQ8N1N5 446 aa9.23□□□□□ -0.93
CHCHD3-205ENST00000481152 LRRN4Q8WUT4 740 aa9.23□□□□□ -0.93
CHCHD3-205ENST00000481152 AAASQ9NRG9 546 aa9.23□□□□□ -0.93
CHCHD3-205ENST00000481152 VARSP26640 1264 aaKnown RBP9.22□□□□□ -0.93
CHCHD3-205ENST00000481152 RFC5P40937 340 aa9.22□□□□□ -0.93
CHCHD3-205ENST00000481152 ARMC2Q8NEN0 867 aa9.22□□□□□ -0.93
CHCHD3-205ENST00000481152 FOXJ1Q92949 421 aa9.22□□□□□ -0.93
CHCHD3-205ENST00000481152 CTC1Q2NKJ3 1217 aa9.21□□□□□ -0.94
CHCHD3-205ENST00000481152 NBPF14Q5TI25 921 aa9.2□□□□□ -0.94
CHCHD3-205ENST00000481152 TLL2Q9Y6L7 1015 aa9.2□□□□□ -0.94
CHCHD3-205ENST00000481152 USP17L8P0C7I0 530 aa9.19□□□□□ -0.94
CHCHD3-205ENST00000481152 HPS1Q92902 700 aa9.19□□□□□ -0.94
CHCHD3-205ENST00000481152 AXIN1O15169 862 aa9.18□□□□□ -0.94
CHCHD3-205ENST00000481152 SMCPP49901 116 aaPredicted RBP9.18□□□□□ -0.94
CHCHD3-205ENST00000481152 AGERQ15109 404 aa9.18□□□□□ -0.94
CHCHD3-205ENST00000481152 C4orf48Q5BLP8 95 aa9.18□□□□□ -0.94
CHCHD3-205ENST00000481152 BPHLQ86WA6 291 aaPredicted RBP9.18□□□□□ -0.94
CHCHD3-205ENST00000481152 FAM174AQ8TBP5 190 aa9.18□□□□□ -0.94
CHCHD3-205ENST00000481152 NR6A1Q15406 480 aa9.17□□□□□ -0.94
CHCHD3-205ENST00000481152 MPNDQ8N594 471 aa9.17□□□□□ -0.94
CHCHD3-205ENST00000481152 WASF2Q9Y6W5 498 aa9.17□□□□□ -0.94
CHCHD3-205ENST00000481152 GPKOWQ92917 476 aaPredicted RBP eCLIP9.16□□□□□ -0.94
CHCHD3-205ENST00000481152 TMEM259Q4ZIN3 620 aa9.15□□□□□ -0.94
CHCHD3-205ENST00000481152 ZNF787Q6DD87 383 aa9.15□□□□□ -0.94
CHCHD3-205ENST00000481152 SH3BP5LQ7L8J4 393 aa9.15□□□□□ -0.94
CHCHD3-205ENST00000481152 SH3RF1Q7Z6J0 888 aa9.15□□□□□ -0.94
CHCHD3-205ENST00000481152 HMX1Q9NP08 348 aaPredicted RBP9.15□□□□□ -0.94
CHCHD3-205ENST00000481152 FKBPLQ9UIM3 349 aa9.15□□□□□ -0.94
CHCHD3-205ENST00000481152 DACH1Q9UI36 760 aa9.14□□□□□ -0.95
CHCHD3-205ENST00000481152 MAGEB6P1A0A0J9YX57 407 aa9.13□□□□□ -0.95
CHCHD3-205ENST00000481152 CDK15Q96Q40 435 aa9.13□□□□□ -0.95
CHCHD3-205ENST00000481152 C1QTNF2Q9BXJ5 285 aa9.13□□□□□ -0.95
CHCHD3-205ENST00000481152 ZC3H4Q9UPT8 1303 aaKnown RBP9.13□□□□□ -0.95
CHCHD3-205ENST00000481152 POTECB2RU33 542 aa9.12□□□□□ -0.95
CHCHD3-205ENST00000481152 EPS8L1Q8TE68 723 aa9.12□□□□□ -0.95
CHCHD3-205ENST00000481152 ADH1CP00326 375 aa9.12□□□□□ -0.95
CHCHD3-205ENST00000481152 NNTQ13423 1086 aa9.12□□□□□ -0.95
CHCHD3-205ENST00000481152 ARID5BQ14865 1188 aa9.12□□□□□ -0.95
CHCHD3-205ENST00000481152 PDXDC2PQ6P474 469 aa9.12□□□□□ -0.95
CHCHD3-205ENST00000481152 CARD14Q9BXL6 1004 aa9.12□□□□□ -0.95
CHCHD3-205ENST00000481152 TRMT44Q8IYL2 757 aaKnown RBP9.1□□□□□ -0.95
CHCHD3-205ENST00000481152 TRIM34Q9BYJ4 488 aa9.1□□□□□ -0.95
CHCHD3-205ENST00000481152 ERFEQ4G0M1 354 aa9.09□□□□□ -0.95
CHCHD3-205ENST00000481152 PNMA1Q8ND90 353 aa9.09□□□□□ -0.95
CHCHD3-205ENST00000481152 ARHGAP9Q9BRR9 750 aa9.09□□□□□ -0.95
CHCHD3-205ENST00000481152 ATP13A2Q9NQ11 1180 aa9.09□□□□□ -0.95
CHCHD3-205ENST00000481152 GMPR2Q9P2T1 348 aaKnown RBP9.09□□□□□ -0.95
CHCHD3-205ENST00000481152 CAPN5O15484 640 aaPredicted RBP9.08□□□□□ -0.96
CHCHD3-205ENST00000481152 GRM5P41594 1212 aa9.08□□□□□ -0.96
CHCHD3-205ENST00000481152 ARXQ96QS3 562 aa9.08□□□□□ -0.96
CHCHD3-205ENST00000481152 MAP4K5Q9Y4K4 846 aa9.08□□□□□ -0.96
CHCHD3-205ENST00000481152 PTK2Q05397 1052 aa9.07□□□□□ -0.96
CHCHD3-205ENST00000481152 NR5A1Q13285 461 aa9.07□□□□□ -0.96
CHCHD3-205ENST00000481152 GPSM3Q9Y4H4 160 aa9.07□□□□□ -0.96
CHCHD3-205ENST00000481152 NR3C2P08235 984 aa9.06□□□□□ -0.96
CHCHD3-205ENST00000481152 VASH1Q7L8A9 365 aaPredicted RBP9.06□□□□□ -0.96
CHCHD3-205ENST00000481152 BANK1Q8NDB2 785 aa9.06□□□□□ -0.96
CHCHD3-205ENST00000481152 GJD4Q96KN9 370 aaPredicted RBP9.06□□□□□ -0.96
CHCHD3-205ENST00000481152 OCSTAMPQ9BR26 566 aa9.06□□□□□ -0.96
CHCHD3-205ENST00000481152 FSHRP23945 695 aa9.05□□□□□ -0.96
CHCHD3-205ENST00000481152 WDR4P57081 412 aaKnown RBP9.05□□□□□ -0.96
CHCHD3-205ENST00000481152 ZBTB33Q86T24 672 aa9.05□□□□□ -0.96
CHCHD3-205ENST00000481152 BMP1P13497 986 aa9.04□□□□□ -0.96
CHCHD3-205ENST00000481152 TIMP2P16035 220 aa9.04□□□□□ -0.96
CHCHD3-205ENST00000481152 KLF16Q9BXK1 252 aaPredicted RBP9.04□□□□□ -0.96
CHCHD3-205ENST00000481152 C11orf95C9JLR9 678 aaPredicted RBP9.03□□□□□ -0.96
CHCHD3-205ENST00000481152 ADAM32Q8TC27 787 aa9.03□□□□□ -0.96
CHCHD3-205ENST00000481152 SLC10A4Q96EP9 437 aa9.03□□□□□ -0.96
CHCHD3-205ENST00000481152 TRIM46Q7Z4K8 759 aa9.02□□□□□ -0.97
CHCHD3-205ENST00000481152 MTMR14Q8NCE2 650 aa9.02□□□□□ -0.97
CHCHD3-205ENST00000481152 SENP2Q9HC62 589 aa9.02□□□□□ -0.97
CHCHD3-205ENST00000481152 TIMELESSQ9UNS1 1208 aa9.02□□□□□ -0.97
CHCHD3-205ENST00000481152 SOCS7O14512 581 aa9.01□□□□□ -0.97
CHCHD3-205ENST00000481152 ZIC2O95409 532 aaPredicted RBP9.01□□□□□ -0.97
CHCHD3-205ENST00000481152 ITPKCQ96DU7 683 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms