RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 PTPRUQ92729 1446 aa21.98■■□□□ 1.11
SH3D21-203ENST00000480549 SPINK5Q9NQ38 1064 aaPredicted RBP21.97■■□□□ 1.11
SH3D21-203ENST00000480549 RUNDC1Q96C34 613 aa21.97■■□□□ 1.11
SH3D21-203ENST00000480549 PLPPR3Q6T4P5 718 aa21.96■■□□□ 1.11
SH3D21-203ENST00000480549 ITSN1Q15811 1721 aa21.96■■□□□ 1.11
SH3D21-203ENST00000480549 EID1Q9Y6B2 187 aa21.95■■□□□ 1.11
SH3D21-203ENST00000480549 RIMS1Q86UR5 1692 aaKnown RBP21.95■■□□□ 1.1
SH3D21-203ENST00000480549 TOPAZ1Q8N9V7 1692 aa21.95■■□□□ 1.1
SH3D21-203ENST00000480549 NUDT16Q96DE0 195 aaKnown RBP21.95■■□□□ 1.1
SH3D21-203ENST00000480549 DMRT2Q9Y5R5 561 aa21.95■■□□□ 1.1
SH3D21-203ENST00000480549 EDC4Q6P2E9 1401 aaKnown RBP21.94■■□□□ 1.1
SH3D21-203ENST00000480549 ZBTB47Q9UFB7 747 aaPredicted RBP21.93■■□□□ 1.1
SH3D21-203ENST00000480549 DIP2AQ14689 1571 aa21.93■■□□□ 1.1
SH3D21-203ENST00000480549 SLC26A8Q96RN1 970 aa21.93■■□□□ 1.1
SH3D21-203ENST00000480549 CEP170BQ9Y4F5 1589 aaPredicted RBP21.92■■□□□ 1.1
SH3D21-203ENST00000480549 WWC1Q8IX03 1113 aa21.92■■□□□ 1.1
SH3D21-203ENST00000480549 EXOC6Q8TAG9 804 aa21.92■■□□□ 1.1
SH3D21-203ENST00000480549 PRR36Q9H6K5 1346 aa21.92■■□□□ 1.1
SH3D21-203ENST00000480549 NCKAP5LQ9HCH0 1330 aa21.92■■□□□ 1.1
SH3D21-203ENST00000480549 NKTRP30414 1462 aaKnown RBP21.92■■□□□ 1.1
SH3D21-203ENST00000480549 PNPLA6Q8IY17 1366 aa21.92■■□□□ 1.1
SH3D21-203ENST00000480549 PLEKHG5O94827 1062 aa21.91■■□□□ 1.1
SH3D21-203ENST00000480549 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.91■■□□□ 1.1
SH3D21-203ENST00000480549 PHF23Q9BUL5 403 aaPredicted RBP21.91■■□□□ 1.1
SH3D21-203ENST00000480549 CCDC61Q9Y6R9 512 aa21.91■■□□□ 1.1
SH3D21-203ENST00000480549 E9PSI1 815 aa21.91■■□□□ 1.1
SH3D21-203ENST00000480549 PLIN1O60240 522 aa21.91■■□□□ 1.1
SH3D21-203ENST00000480549 THEMISQ8N1K5 641 aaPredicted RBP21.91■■□□□ 1.1
SH3D21-203ENST00000480549 TCP11L2Q8N4U5 519 aa21.91■■□□□ 1.1
SH3D21-203ENST00000480549 MAP2P11137 1827 aaKnown RBP21.91■■□□□ 1.1
SH3D21-203ENST00000480549 ANP32AP39687 249 aaKnown RBP21.9■■□□□ 1.1
SH3D21-203ENST00000480549 TBX22Q9Y458 520 aa21.89■■□□□ 1.1
SH3D21-203ENST00000480549 U2AF1L5P0DN76 240 aaPredicted RBP21.89■■□□□ 1.09
SH3D21-203ENST00000480549 U2AF1Q01081 240 aaKnown RBP eCLIP21.89■■□□□ 1.09
SH3D21-203ENST00000480549 NRKQ7Z2Y5 1582 aa21.88■■□□□ 1.09
SH3D21-203ENST00000480549 XRN1Q8IZH2 1706 aaKnown RBP21.88■■□□□ 1.09
SH3D21-203ENST00000480549 IPO9Q96P70 1041 aaKnown RBP21.88■■□□□ 1.09
SH3D21-203ENST00000480549 PTCH1Q13635 1447 aa21.88■■□□□ 1.09
SH3D21-203ENST00000480549 ADAMTSL3P82987 1691 aa21.88■■□□□ 1.09
SH3D21-203ENST00000480549 BRPF3Q9ULD4 1205 aa21.87■■□□□ 1.09
SH3D21-203ENST00000480549 RRP7AQ9Y3A4 280 aaKnown RBP21.87■■□□□ 1.09
SH3D21-203ENST00000480549 NCBP3Q53F19 620 aaKnown RBP21.86■■□□□ 1.09
SH3D21-203ENST00000480549 CCDC27Q2M243 656 aa21.86■■□□□ 1.09
SH3D21-203ENST00000480549 ZNF142P52746 1687 aaPredicted RBP21.86■■□□□ 1.09
SH3D21-203ENST00000480549 PLEKHF1Q96S99 279 aa21.85■■□□□ 1.09
SH3D21-203ENST00000480549 AMOTL2Q9Y2J4 779 aa21.85■■□□□ 1.09
SH3D21-203ENST00000480549 NEUROD2Q15784 382 aa21.85■■□□□ 1.09
SH3D21-203ENST00000480549 NME9Q86XW9 330 aa21.85■■□□□ 1.09
SH3D21-203ENST00000480549 POLKQ9UBT6 870 aa21.84■■□□□ 1.09
SH3D21-203ENST00000480549 FBLN1P23142 703 aa21.83■■□□□ 1.08
SH3D21-203ENST00000480549 C20orf194Q5TEA3 1177 aa21.82■■□□□ 1.08
SH3D21-203ENST00000480549 U2SURPO15042 1029 aaKnown RBP21.82■■□□□ 1.08
SH3D21-203ENST00000480549 DIAPH1O60610 1272 aaKnown RBP21.82■■□□□ 1.08
SH3D21-203ENST00000480549 WDR63Q8IWG1 891 aa21.82■■□□□ 1.08
SH3D21-203ENST00000480549 CRBNQ96SW2 442 aa21.82■■□□□ 1.08
SH3D21-203ENST00000480549 ZRANB1Q9UGI0 708 aa21.82■■□□□ 1.08
SH3D21-203ENST00000480549 ZNF692Q9BU19 519 aaPredicted RBP21.81■■□□□ 1.08
SH3D21-203ENST00000480549 AATKQ6ZMQ8 1374 aa21.8■■□□□ 1.08
SH3D21-203ENST00000480549 NEFMP07197 916 aa21.8■■□□□ 1.08
SH3D21-203ENST00000480549 LAS1LQ9Y4W2 734 aaKnown RBP21.79■■□□□ 1.08
SH3D21-203ENST00000480549 RGPD8O14715 1765 aaPredicted RBP21.79■■□□□ 1.08
SH3D21-203ENST00000480549 PLEKHG3A1L390 1219 aa21.79■■□□□ 1.08
SH3D21-203ENST00000480549 CDK12Q9NYV4 1490 aaPredicted RBP21.79■■□□□ 1.08
SH3D21-203ENST00000480549 LRRC7Q96NW7 1537 aa21.79■■□□□ 1.08
SH3D21-203ENST00000480549 ACEP12821 1306 aa21.77■■□□□ 1.08
SH3D21-203ENST00000480549 PODXL2Q9NZ53 605 aa21.77■■□□□ 1.07
SH3D21-203ENST00000480549 NALCNQ8IZF0 1738 aa21.76■■□□□ 1.07
SH3D21-203ENST00000480549 USP6P35125 1406 aa21.76■■□□□ 1.07
SH3D21-203ENST00000480549 PIK3R4Q99570 1358 aa21.76■■□□□ 1.07
SH3D21-203ENST00000480549 EMILIN1Q9Y6C2 1016 aa21.76■■□□□ 1.07
SH3D21-203ENST00000480549 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.75■■□□□ 1.07
SH3D21-203ENST00000480549 COG3Q96JB2 828 aa21.75■■□□□ 1.07
SH3D21-203ENST00000480549 NUTM2FA1L443 756 aa21.75■■□□□ 1.07
SH3D21-203ENST00000480549 BCAR3O75815 825 aa21.75■■□□□ 1.07
SH3D21-203ENST00000480549 TMPOP42166 694 aaKnown RBP21.75■■□□□ 1.07
SH3D21-203ENST00000480549 CHD2O14647 1828 aaKnown RBP21.74■■□□□ 1.07
SH3D21-203ENST00000480549 TTC21BQ7Z4L5 1316 aa21.74■■□□□ 1.07
SH3D21-203ENST00000480549 SSH2Q76I76 1423 aa21.74■■□□□ 1.07
SH3D21-203ENST00000480549 PPM1GO15355 546 aaPredicted RBP21.73■■□□□ 1.07
SH3D21-203ENST00000480549 OVOS2A0A0J9YW53 1432 aa21.73■■□□□ 1.07
SH3D21-203ENST00000480549 OVOS2Q6IE36 1432 aa21.73■■□□□ 1.07
SH3D21-203ENST00000480549 TRIM35Q9UPQ4 493 aa21.73■■□□□ 1.07
SH3D21-203ENST00000480549 MAPK8IP3Q9UPT6 1336 aa21.72■■□□□ 1.07
SH3D21-203ENST00000480549 SETD1BQ9UPS6 1966 aaKnown RBP21.72■■□□□ 1.07
SH3D21-203ENST00000480549 FMN2Q9NZ56 1722 aa21.72■■□□□ 1.07
SH3D21-203ENST00000480549 FCHSD2O94868 740 aa21.71■■□□□ 1.07
SH3D21-203ENST00000480549 RSPH6AQ9H0K4 717 aa21.71■■□□□ 1.07
SH3D21-203ENST00000480549 DNAJC5Q9H3Z4 198 aa21.71■■□□□ 1.07
SH3D21-203ENST00000480549 KCNA6P17658 529 aa21.71■■□□□ 1.07
SH3D21-203ENST00000480549 IL13P35225 146 aa21.71■■□□□ 1.07
SH3D21-203ENST00000480549 PNNQ9H307 717 aaKnown RBP21.7■■□□□ 1.06
SH3D21-203ENST00000480549 RRS1Q15050 365 aaKnown RBP21.69■■□□□ 1.06
SH3D21-203ENST00000480549 NPM2Q86SE8 214 aaKnown RBP21.69■■□□□ 1.06
SH3D21-203ENST00000480549 VSIG10Q8N0Z9 540 aa21.69■■□□□ 1.06
SH3D21-203ENST00000480549 MYH16Q9H6N6 1097 aa21.68■■□□□ 1.06
SH3D21-203ENST00000480549 ANKLE2Q86XL3 938 aa21.67■■□□□ 1.06
SH3D21-203ENST00000480549 ZMYND15Q9H091 742 aa21.67■■□□□ 1.06
SH3D21-203ENST00000480549 PEAK1Q9H792 1746 aa21.67■■□□□ 1.06
SH3D21-203ENST00000480549 ANKARQ7Z5J8 1434 aa21.67■■□□□ 1.06
SH3D21-203ENST00000480549 RARSP54136 660 aaKnown RBP21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms