RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 UBAP1LF5GYI3 381 aa8.8□□□□□ -1
HERC4-210ENST00000480158 CERKQ8TCT0 537 aa8.8□□□□□ -1
HERC4-210ENST00000480158 NSD3Q9BZ95 1437 aa8.79□□□□□ -1
HERC4-210ENST00000480158 PER1O15534 1290 aaPredicted RBP8.79□□□□□ -1
HERC4-210ENST00000480158 NUTM2GQ5VZR2 741 aa8.79□□□□□ -1
HERC4-210ENST00000480158 LMOD2Q6P5Q4 547 aa8.79□□□□□ -1
HERC4-210ENST00000480158 ANKRD36BQ8N2N9 1353 aa8.79□□□□□ -1
HERC4-210ENST00000480158 ANKARQ7Z5J8 1434 aa8.79□□□□□ -1
HERC4-210ENST00000480158 TNNT2P45379 298 aaPredicted RBP8.79□□□□□ -1
HERC4-210ENST00000480158 BRINP3Q76B58 766 aa8.79□□□□□ -1
HERC4-210ENST00000480158 CD163L1Q9NR16 1453 aa8.79□□□□□ -1
HERC4-210ENST00000480158 DCCP43146 1447 aa8.78□□□□□ -1
HERC4-210ENST00000480158 GGNBP2Q9H3C7 697 aa8.78□□□□□ -1
HERC4-210ENST00000480158 NINLQ9Y2I6 1382 aa8.78□□□□□ -1
HERC4-210ENST00000480158 ZRANB1Q9UGI0 708 aa8.78□□□□□ -1
HERC4-210ENST00000480158 SOX12O15370 315 aa8.77□□□□□ -1.01
HERC4-210ENST00000480158 TOM1O60784 492 aa8.77□□□□□ -1.01
HERC4-210ENST00000480158 NME9Q86XW9 330 aa8.77□□□□□ -1.01
HERC4-210ENST00000480158 MIER1Q8N108 512 aa8.77□□□□□ -1.01
HERC4-210ENST00000480158 ZNF692Q9BU19 519 aaPredicted RBP8.77□□□□□ -1.01
HERC4-210ENST00000480158 ANP32CO43423 234 aa8.76□□□□□ -1.01
HERC4-210ENST00000480158 KRT28Q7Z3Y7 464 aa8.76□□□□□ -1.01
HERC4-210ENST00000480158 CPSF1Q10570 1443 aaKnown RBP8.76□□□□□ -1.01
HERC4-210ENST00000480158 CGNL1Q0VF96 1302 aa8.76□□□□□ -1.01
HERC4-210ENST00000480158 POLR3AO14802 1390 aaPredicted RBP8.76□□□□□ -1.01
HERC4-210ENST00000480158 FYB1O15117 783 aa8.75□□□□□ -1.01
HERC4-210ENST00000480158 FBLN1P23142 703 aa8.75□□□□□ -1.01
HERC4-210ENST00000480158 ABTB2Q8N961 1025 aa8.75□□□□□ -1.01
HERC4-210ENST00000480158 TOPAZ1Q8N9V7 1692 aa8.75□□□□□ -1.01
HERC4-210ENST00000480158 TTC21BQ7Z4L5 1316 aa8.75□□□□□ -1.01
HERC4-210ENST00000480158 USP6P35125 1406 aa8.75□□□□□ -1.01
HERC4-210ENST00000480158 ITSN1Q15811 1721 aa8.74□□□□□ -1.01
HERC4-210ENST00000480158 CACNB1Q02641 598 aaPredicted RBP8.74□□□□□ -1.01
HERC4-210ENST00000480158 NPHP3Q7Z494 1330 aa8.74□□□□□ -1.01
HERC4-210ENST00000480158 MORC1Q86VD1 984 aa8.74□□□□□ -1.01
HERC4-210ENST00000480158 PRKRIP1Q9H875 184 aaPredicted RBP8.74□□□□□ -1.01
HERC4-210ENST00000480158 EDC4Q6P2E9 1401 aaKnown RBP8.74□□□□□ -1.01
HERC4-210ENST00000480158 NLRP6P59044 892 aa8.73□□□□□ -1.01
HERC4-210ENST00000480158 FBXO3Q9UK99 471 aa8.73□□□□□ -1.01
HERC4-210ENST00000480158 COG3Q96JB2 828 aa8.72□□□□□ -1.01
HERC4-210ENST00000480158 PPM1GO15355 546 aaPredicted RBP8.72□□□□□ -1.01
HERC4-210ENST00000480158 CABLES1Q8TDN4 633 aa8.72□□□□□ -1.01
HERC4-210ENST00000480158 ROBO1Q9Y6N7 1651 aa8.71□□□□□ -1.01
HERC4-210ENST00000480158 ZBTB7CA1YPR0 619 aa8.71□□□□□ -1.01
HERC4-210ENST00000480158 SAMD1Q6SPF0 538 aaPredicted RBP8.71□□□□□ -1.01
HERC4-210ENST00000480158 SSH2Q76I76 1423 aa8.71□□□□□ -1.02
HERC4-210ENST00000480158 AKAP12Q02952 1782 aa8.71□□□□□ -1.02
HERC4-210ENST00000480158 TTC21AQ8NDW8 1320 aa8.7□□□□□ -1.02
HERC4-210ENST00000480158 CCDC184Q52MB2 194 aa8.7□□□□□ -1.02
HERC4-210ENST00000480158 MON2Q7Z3U7 1717 aa8.7□□□□□ -1.02
HERC4-210ENST00000480158 KIF1AQ12756 1690 aa8.7□□□□□ -1.02
HERC4-210ENST00000480158 HAP1P54257 671 aaPredicted RBP8.7□□□□□ -1.02
HERC4-210ENST00000480158 RRS1Q15050 365 aaKnown RBP8.7□□□□□ -1.02
HERC4-210ENST00000480158 SOS2Q07890 1332 aaPredicted RBP8.69□□□□□ -1.02
HERC4-210ENST00000480158 RALBP1Q15311 655 aa8.69□□□□□ -1.02
HERC4-210ENST00000480158 PXDNQ92626 1479 aa8.69□□□□□ -1.02
HERC4-210ENST00000480158 SPATA31A3Q5VYP0 1347 aa8.69□□□□□ -1.02
HERC4-210ENST00000480158 PPP2R1AP30153 589 aa8.69□□□□□ -1.02
HERC4-210ENST00000480158 NLRP13Q86W25 1043 aa8.69□□□□□ -1.02
HERC4-210ENST00000480158 PARD3Q8TEW0 1356 aa8.68□□□□□ -1.02
HERC4-210ENST00000480158 NRKQ7Z2Y5 1582 aa8.68□□□□□ -1.02
HERC4-210ENST00000480158 MTHFSP49914 203 aa8.68□□□□□ -1.02
HERC4-210ENST00000480158 ZC3H6P61129 1189 aaKnown RBP8.68□□□□□ -1.02
HERC4-210ENST00000480158 LRRC59Q96AG4 307 aaKnown RBP8.68□□□□□ -1.02
HERC4-210ENST00000480158 EMILIN1Q9Y6C2 1016 aa8.68□□□□□ -1.02
HERC4-210ENST00000480158 NSD2O96028 1365 aa8.67□□□□□ -1.02
HERC4-210ENST00000480158 NPC1L1Q9UHC9 1359 aa8.67□□□□□ -1.02
HERC4-210ENST00000480158 PIK3C2AO00443 1686 aa8.67□□□□□ -1.02
HERC4-210ENST00000480158 MYBBP1AQ9BQG0 1328 aaKnown RBP8.67□□□□□ -1.02
HERC4-210ENST00000480158 IQSEC2Q5JU85 1478 aa8.67□□□□□ -1.02
HERC4-210ENST00000480158 HSPA1LP34931 641 aa8.67□□□□□ -1.02
HERC4-210ENST00000480158 TNS3Q68CZ2 1445 aa8.67□□□□□ -1.02
HERC4-210ENST00000480158 MRS2Q9HD23 443 aa8.67□□□□□ -1.02
HERC4-210ENST00000480158 SBNO1A3KN83 1393 aa8.67□□□□□ -1.02
HERC4-210ENST00000480158 NUTM2BA6NNL0 878 aaPredicted RBP8.66□□□□□ -1.02
HERC4-210ENST00000480158 NUTM2EB1AL46 878 aaPredicted RBP8.66□□□□□ -1.02
HERC4-210ENST00000480158 GCP02774 474 aa8.66□□□□□ -1.02
HERC4-210ENST00000480158 NUTM2AQ8IVF1 878 aaPredicted RBP8.66□□□□□ -1.02
HERC4-210ENST00000480158 POLKQ9UBT6 870 aa8.66□□□□□ -1.02
HERC4-210ENST00000480158 KIF20BQ96Q89 1820 aa8.66□□□□□ -1.02
HERC4-210ENST00000480158 OVOS2A0A0J9YW53 1432 aa8.66□□□□□ -1.02
HERC4-210ENST00000480158 OVOS2Q6IE36 1432 aa8.66□□□□□ -1.02
HERC4-210ENST00000480158 TRPM3Q9HCF6 1732 aaPredicted RBP8.65□□□□□ -1.02
HERC4-210ENST00000480158 ARHGEF10O15013 1369 aa8.65□□□□□ -1.02
HERC4-210ENST00000480158 BRD4O60885 1362 aaPredicted RBP8.65□□□□□ -1.02
HERC4-210ENST00000480158 NHSL1Q5SYE7 1610 aa8.65□□□□□ -1.03
HERC4-210ENST00000480158 USP31Q70CQ4 1352 aa8.64□□□□□ -1.03
HERC4-210ENST00000480158 SENP3-EIF4A1A0A087X0R7 540 aa8.64□□□□□ -1.03
HERC4-210ENST00000480158 AMPHP49418 695 aa8.64□□□□□ -1.03
HERC4-210ENST00000480158 CHRNA2Q15822 529 aa8.64□□□□□ -1.03
HERC4-210ENST00000480158 FAM9BQ8IZU0 186 aa8.64□□□□□ -1.03
HERC4-210ENST00000480158 PHLPP1O60346 1717 aa8.64□□□□□ -1.03
HERC4-210ENST00000480158 MAP3K19Q56UN5 1328 aa8.64□□□□□ -1.03
HERC4-210ENST00000480158 ADAMTS2O95450 1211 aa8.64□□□□□ -1.03
HERC4-210ENST00000480158 LTV1Q96GA3 475 aaPredicted RBP8.64□□□□□ -1.03
HERC4-210ENST00000480158 PLSCR2Q9NRY7 297 aa8.64□□□□□ -1.03
HERC4-210ENST00000480158 PRKCSHP14314 528 aaPredicted RBP8.63□□□□□ -1.03
HERC4-210ENST00000480158 HSP90AB2PQ58FF8 381 aa8.63□□□□□ -1.03
HERC4-210ENST00000480158 KCNH5Q8NCM2 988 aa8.63□□□□□ -1.03
HERC4-210ENST00000480158 AHDC1Q5TGY3 1603 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms