RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 CDCA8Q53HL2 280 aa21.73■■□□□ 1.07
C9orf3-217ENST00000479161 USP6P35125 1406 aa21.72■■□□□ 1.07
C9orf3-217ENST00000479161 SSH2Q76I76 1423 aa21.72■■□□□ 1.07
C9orf3-217ENST00000479161 ZNF772Q68DY9 489 aaPredicted RBP21.72■■□□□ 1.07
C9orf3-217ENST00000479161 FNBP4Q8N3X1 1017 aaPredicted RBP21.71■■□□□ 1.07
C9orf3-217ENST00000479161 ABCA3Q99758 1704 aa21.7■■□□□ 1.06
C9orf3-217ENST00000479161 CRYBG1Q9Y4K1 1723 aa21.69■■□□□ 1.06
C9orf3-217ENST00000479161 EIF4G2P78344 907 aaKnown RBP eCLIP21.69■■□□□ 1.06
C9orf3-217ENST00000479161 PAK3O75914 559 aaPredicted RBP21.68■■□□□ 1.06
C9orf3-217ENST00000479161 MON2Q7Z3U7 1717 aa21.67■■□□□ 1.06
C9orf3-217ENST00000479161 TTC21AQ8NDW8 1320 aa21.66■■□□□ 1.06
C9orf3-217ENST00000479161 ADAMTS2O95450 1211 aa21.66■■□□□ 1.06
C9orf3-217ENST00000479161 LMOD2Q6P5Q4 547 aa21.66■■□□□ 1.06
C9orf3-217ENST00000479161 CD163L1Q9NR16 1453 aa21.65■■□□□ 1.06
C9orf3-217ENST00000479161 AFF2P51816 1311 aa21.65■■□□□ 1.06
C9orf3-217ENST00000479161 NGLY1Q96IV0 654 aa21.65■■□□□ 1.06
C9orf3-217ENST00000479161 C8orf37Q96NL8 207 aa21.65■■□□□ 1.06
C9orf3-217ENST00000479161 TERF2IPQ9NYB0 399 aa21.65■■□□□ 1.06
C9orf3-217ENST00000479161 NLRP13Q86W25 1043 aa21.64■■□□□ 1.05
C9orf3-217ENST00000479161 ABTB2Q8N961 1025 aa21.64■■□□□ 1.05
C9orf3-217ENST00000479161 NRKQ7Z2Y5 1582 aa21.64■■□□□ 1.05
C9orf3-217ENST00000479161 KTN1Q86UP2 1357 aaKnown RBP21.63■■□□□ 1.05
C9orf3-217ENST00000479161 USP19O94966 1318 aa21.63■■□□□ 1.05
C9orf3-217ENST00000479161 HDGFL2Q7Z4V5 671 aaPredicted RBP21.63■■□□□ 1.05
C9orf3-217ENST00000479161 SLC12A5Q9H2X9 1139 aa21.63■■□□□ 1.05
C9orf3-217ENST00000479161 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.63■■□□□ 1.05
C9orf3-217ENST00000479161 TTC21BQ7Z4L5 1316 aa21.62■■□□□ 1.05
C9orf3-217ENST00000479161 SLIT2O94813 1529 aa21.62■■□□□ 1.05
C9orf3-217ENST00000479161 POTEAQ6S8J7 498 aa21.62■■□□□ 1.05
C9orf3-217ENST00000479161 CABLES1Q8TDN4 633 aa21.62■■□□□ 1.05
C9orf3-217ENST00000479161 NWD2Q9ULI1 1742 aa21.62■■□□□ 1.05
C9orf3-217ENST00000479161 HAP1P54257 671 aaPredicted RBP21.61■■□□□ 1.05
C9orf3-217ENST00000479161 PHRF1Q9P1Y6 1649 aaKnown RBP21.61■■□□□ 1.05
C9orf3-217ENST00000479161 TMC1Q8TDI8 760 aa21.6■■□□□ 1.05
C9orf3-217ENST00000479161 EDC4Q6P2E9 1401 aaKnown RBP21.6■■□□□ 1.05
C9orf3-217ENST00000479161 BCL9LQ86UU0 1499 aa21.59■■□□□ 1.05
C9orf3-217ENST00000479161 HSPA5P11021 654 aaKnown RBP21.59■■□□□ 1.05
C9orf3-217ENST00000479161 PIK3C2AO00443 1686 aa21.59■■□□□ 1.05
C9orf3-217ENST00000479161 USP54Q70EL1 1684 aa21.59■■□□□ 1.05
C9orf3-217ENST00000479161 ANKRD36BQ8N2N9 1353 aa21.59■■□□□ 1.05
C9orf3-217ENST00000479161 USP21Q9UK80 565 aa21.58■■□□□ 1.05
C9orf3-217ENST00000479161 COL14A1Q05707 1796 aaKnown RBP21.58■■□□□ 1.04
C9orf3-217ENST00000479161 A0A1W2PP64 1363 aa21.58■■□□□ 1.04
C9orf3-217ENST00000479161 CPDO75976 1380 aa21.58■■□□□ 1.04
C9orf3-217ENST00000479161 USP31Q70CQ4 1352 aa21.58■■□□□ 1.04
C9orf3-217ENST00000479161 CDK12Q9NYV4 1490 aaPredicted RBP21.58■■□□□ 1.04
C9orf3-217ENST00000479161 SLIT3O75094 1523 aa21.57■■□□□ 1.04
C9orf3-217ENST00000479161 TRPC5Q9UL62 973 aaPredicted RBP21.57■■□□□ 1.04
C9orf3-217ENST00000479161 NLRP6P59044 892 aa21.56■■□□□ 1.04
C9orf3-217ENST00000479161 QTRT2Q9H974 415 aaKnown RBP21.56■■□□□ 1.04
C9orf3-217ENST00000479161 ATRNO75882 1429 aa21.55■■□□□ 1.04
C9orf3-217ENST00000479161 FAM83GA6ND36 823 aa21.55■■□□□ 1.04
C9orf3-217ENST00000479161 GCP02774 474 aa21.55■■□□□ 1.04
C9orf3-217ENST00000479161 UNC5CLQ8IV45 518 aa21.55■■□□□ 1.04
C9orf3-217ENST00000479161 PLCH1Q4KWH8 1693 aa21.54■■□□□ 1.04
C9orf3-217ENST00000479161 RXRBP28702 533 aa21.54■■□□□ 1.04
C9orf3-217ENST00000479161 RBM6P78332 1123 aaKnown RBP21.54■■□□□ 1.04
C9orf3-217ENST00000479161 KCNH5Q8NCM2 988 aa21.53■■□□□ 1.04
C9orf3-217ENST00000479161 MYOM1P52179 1685 aa21.53■■□□□ 1.04
C9orf3-217ENST00000479161 NUTM2GQ5VZR2 741 aa21.51■■□□□ 1.03
C9orf3-217ENST00000479161 PRDM11Q9NQV5 511 aa21.51■■□□□ 1.03
C9orf3-217ENST00000479161 KIAA0232Q92628 1395 aa21.5■■□□□ 1.03
C9orf3-217ENST00000479161 NRAPQ86VF7 1730 aa21.49■■□□□ 1.03
C9orf3-217ENST00000479161 VPS72Q15906 364 aa21.49■■□□□ 1.03
C9orf3-217ENST00000479161 GJD4Q96KN9 370 aaPredicted RBP21.47■■□□□ 1.03
C9orf3-217ENST00000479161 AATKQ6ZMQ8 1374 aa21.47■■□□□ 1.03
C9orf3-217ENST00000479161 LMO7Q8WWI1 1683 aa21.47■■□□□ 1.03
C9orf3-217ENST00000479161 OVOS2A0A0J9YW53 1432 aa21.46■■□□□ 1.03
C9orf3-217ENST00000479161 OVOS2Q6IE36 1432 aa21.46■■□□□ 1.03
C9orf3-217ENST00000479161 ABCC6O95255 1503 aa21.46■■□□□ 1.03
C9orf3-217ENST00000479161 ZC3H6P61129 1189 aaKnown RBP21.46■■□□□ 1.03
C9orf3-217ENST00000479161 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.46■■□□□ 1.032e-6■□□□□ 9.3
C9orf3-217ENST00000479161 BTG4Q9NY30 223 aa21.46■■□□□ 1.03
C9orf3-217ENST00000479161 NFAT5O94916 1531 aa21.45■■□□□ 1.02
C9orf3-217ENST00000479161 PLEKHG5O94827 1062 aa21.44■■□□□ 1.02
C9orf3-217ENST00000479161 ARHGEF25Q86VW2 580 aa21.44■■□□□ 1.02
C9orf3-217ENST00000479161 NME9Q86XW9 330 aa21.44■■□□□ 1.02
C9orf3-217ENST00000479161 COL18A1P39060 1754 aa21.43■■□□□ 1.02
C9orf3-217ENST00000479161 ONECUT3O60422 494 aaPredicted RBP21.43■■□□□ 1.02
C9orf3-217ENST00000479161 CAMTA1Q9Y6Y1 1673 aa21.42■■□□□ 1.02
C9orf3-217ENST00000479161 C11orf95C9JLR9 678 aaPredicted RBP21.41■■□□□ 1.02
C9orf3-217ENST00000479161 FYB1O15117 783 aa21.41■■□□□ 1.02
C9orf3-217ENST00000479161 CARD14Q9BXL6 1004 aa21.41■■□□□ 1.02
C9orf3-217ENST00000479161 GLI3P10071 1580 aa21.4■■□□□ 1.02
C9orf3-217ENST00000479161 CHRNA2Q15822 529 aa21.4■■□□□ 1.02
C9orf3-217ENST00000479161 COG3Q96JB2 828 aa21.4■■□□□ 1.02
C9orf3-217ENST00000479161 KIF20BQ96Q89 1820 aa21.39■■□□□ 1.01
C9orf3-217ENST00000479161 SPATA31A5Q5VU36 1347 aa21.38■■□□□ 1.01
C9orf3-217ENST00000479161 SPATA31A7Q8IWB4 1347 aa21.38■■□□□ 1.01
C9orf3-217ENST00000479161 ZRANB1Q9UGI0 708 aa21.38■■□□□ 1.01
C9orf3-217ENST00000479161 RGS12O14924 1447 aa21.38■■□□□ 1.01
C9orf3-217ENST00000479161 COL5A2P05997 1499 aaPredicted RBP21.37■■□□□ 1.01
C9orf3-217ENST00000479161 CGNL1Q0VF96 1302 aa21.36■■□□□ 1.01
C9orf3-217ENST00000479161 KIF7Q2M1P5 1343 aa21.36■■□□□ 1.01
C9orf3-217ENST00000479161 NSD3Q9BZ95 1437 aa21.36■■□□□ 1.01
C9orf3-217ENST00000479161 LTN1O94822 1766 aa21.35■■□□□ 1.01
C9orf3-217ENST00000479161 SPATA31A1Q5TZJ5 1347 aa21.34■■□□□ 1.01
C9orf3-217ENST00000479161 EVA1CP58658 441 aa21.34■■□□□ 1.01
C9orf3-217ENST00000479161 THRAP3Q9Y2W1 955 aaKnown RBP21.34■■□□□ 1.01
C9orf3-217ENST00000479161 PANK3Q9H999 370 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 156.6 ms