RNA–Protein interactions for RNA: ENST00000479029.1

PHF1-207, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 933 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-207ENST00000479029 NBPF8Q3BBV2 869 aa23.94■■□□□ 1.42
PHF1-207ENST00000479029 SIN3AQ96ST3 1273 aa23.94■■□□□ 1.42
PHF1-207ENST00000479029 ALS2Q96Q42 1657 aa23.93■■□□□ 1.42
PHF1-207ENST00000479029 ACEP12821 1306 aa23.93■■□□□ 1.42
PHF1-207ENST00000479029 SRPK2P78362 688 aaKnown RBP23.93■■□□□ 1.42
PHF1-207ENST00000479029 ABCA3Q99758 1704 aa23.93■■□□□ 1.42
PHF1-207ENST00000479029 NEUROD1Q13562 356 aa23.92■■□□□ 1.42
PHF1-207ENST00000479029 NWD2Q9ULI1 1742 aa23.92■■□□□ 1.42
PHF1-207ENST00000479029 POLR3AO14802 1390 aaPredicted RBP23.91■■□□□ 1.42
PHF1-207ENST00000479029 ITSN1Q15811 1721 aa23.91■■□□□ 1.42
PHF1-207ENST00000479029 PRDM11Q9NQV5 511 aa23.91■■□□□ 1.42
PHF1-207ENST00000479029 PLCH1Q4KWH8 1693 aa23.91■■□□□ 1.42
PHF1-207ENST00000479029 A0A0G2JS52 829 aa23.88■■□□□ 1.41
PHF1-207ENST00000479029 MYT1Q01538 1121 aa23.88■■□□□ 1.41
PHF1-207ENST00000479029 NUTM2GQ5VZR2 741 aa23.88■■□□□ 1.41
PHF1-207ENST00000479029 CABP2Q9NPB3 220 aa23.88■■□□□ 1.41
PHF1-207ENST00000479029 KRT27Q7Z3Y8 459 aa23.87■■□□□ 1.41
PHF1-207ENST00000479029 FAM98CQ17RN3 349 aaKnown RBP23.86■■□□□ 1.41
PHF1-207ENST00000479029 ABTB2Q8N961 1025 aa23.86■■□□□ 1.41
PHF1-207ENST00000479029 COL14A1Q05707 1796 aaKnown RBP23.86■■□□□ 1.41
PHF1-207ENST00000479029 BLMP54132 1417 aaPredicted RBP23.84■■□□□ 1.41
PHF1-207ENST00000479029 KIAA0232Q92628 1395 aa23.84■■□□□ 1.41
PHF1-207ENST00000479029 ZC3H6P61129 1189 aaKnown RBP23.84■■□□□ 1.41
PHF1-207ENST00000479029 ZRANB1Q9UGI0 708 aa23.84■■□□□ 1.41
PHF1-207ENST00000479029 PPIP5K1Q6PFW1 1433 aa23.84■■□□□ 1.41
PHF1-207ENST00000479029 SPATA31A5Q5VU36 1347 aa23.84■■□□□ 1.41
PHF1-207ENST00000479029 SPATA31A7Q8IWB4 1347 aa23.84■■□□□ 1.41
PHF1-207ENST00000479029 SF3B2Q13435 895 aaKnown RBP23.83■■□□□ 1.41
PHF1-207ENST00000479029 CHRNA2Q15822 529 aa23.82■■□□□ 1.4
PHF1-207ENST00000479029 TOPAZ1Q8N9V7 1692 aa23.82■■□□□ 1.4
PHF1-207ENST00000479029 ROCK2O75116 1388 aaKnown RBP23.81■■□□□ 1.4
PHF1-207ENST00000479029 CABP1Q9NZU7 370 aa23.81■■□□□ 1.4
PHF1-207ENST00000479029 SRCAPQ6ZRS2 3230 aa23.8■■□□□ 1.4
PHF1-207ENST00000479029 NLRP13Q86W25 1043 aa23.8■■□□□ 1.4
PHF1-207ENST00000479029 EVC2Q86UK5 1308 aa23.8■■□□□ 1.4
PHF1-207ENST00000479029 NRAPQ86VF7 1730 aa23.79■■□□□ 1.4
PHF1-207ENST00000479029 BRWD3Q6RI45 1802 aa23.79■■□□□ 1.4
PHF1-207ENST00000479029 CRYBG1Q9Y4K1 1723 aa23.79■■□□□ 1.4
PHF1-207ENST00000479029 STRN4Q9NRL3 753 aa23.78■■□□□ 1.4
PHF1-207ENST00000479029 BRD4O60885 1362 aaPredicted RBP23.78■■□□□ 1.4
PHF1-207ENST00000479029 EVA1CP58658 441 aa23.77■■□□□ 1.4
PHF1-207ENST00000479029 USP19O94966 1318 aa23.76■■□□□ 1.39
PHF1-207ENST00000479029 SPATA31A1Q5TZJ5 1347 aa23.76■■□□□ 1.39
PHF1-207ENST00000479029 QRICH2Q9H0J4 1663 aa23.76■■□□□ 1.39
PHF1-207ENST00000479029 DEFB132Q7Z7B7 95 aa23.75■■□□□ 1.39
PHF1-207ENST00000479029 TRPM1Q7Z4N2 1603 aa23.74■■□□□ 1.39
PHF1-207ENST00000479029 GCP02774 474 aa23.74■■□□□ 1.39
PHF1-207ENST00000479029 CPDO75976 1380 aa23.73■■□□□ 1.39
PHF1-207ENST00000479029 NLRP6P59044 892 aa23.72■■□□□ 1.39
PHF1-207ENST00000479029 PHRF1Q9P1Y6 1649 aaKnown RBP23.72■■□□□ 1.39
PHF1-207ENST00000479029 USP6P35125 1406 aa23.71■■□□□ 1.39
PHF1-207ENST00000479029 USP35Q9P2H5 1018 aa23.71■■□□□ 1.39
PHF1-207ENST00000479029 ZNF692Q9BU19 519 aaPredicted RBP23.7■■□□□ 1.38
PHF1-207ENST00000479029 FAM182BQ5T319 152 aa23.69■■□□□ 1.38
PHF1-207ENST00000479029 BAG6P46379 1132 aa23.68■■□□□ 1.38
PHF1-207ENST00000479029 LARP1Q6PKG0 1096 aaKnown RBP23.68■■□□□ 1.38
PHF1-207ENST00000479029 CARD11Q9BXL7 1154 aa23.68■■□□□ 1.38
PHF1-207ENST00000479029 SSH2Q76I76 1423 aa23.67■■□□□ 1.38
PHF1-207ENST00000479029 NRKQ7Z2Y5 1582 aa23.67■■□□□ 1.38
PHF1-207ENST00000479029 BARGINQ6ZT62 677 aa23.67■■□□□ 1.38
PHF1-207ENST00000479029 TONSLQ96HA7 1378 aa23.66■■□□□ 1.38
PHF1-207ENST00000479029 CAMTA1Q9Y6Y1 1673 aa23.66■■□□□ 1.38
PHF1-207ENST00000479029 ZBTB7CA1YPR0 619 aa23.65■■□□□ 1.38
PHF1-207ENST00000479029 TCP11L2Q8N4U5 519 aa23.65■■□□□ 1.38
PHF1-207ENST00000479029 THSD7AQ9UPZ6 1657 aa23.64■■□□□ 1.38
PHF1-207ENST00000479029 PDE3BQ13370 1112 aa23.63■■□□□ 1.37
PHF1-207ENST00000479029 FAM196AQ6ZSG2 479 aa23.63■■□□□ 1.37
PHF1-207ENST00000479029 TTC21BQ7Z4L5 1316 aa23.62■■□□□ 1.37
PHF1-207ENST00000479029 TRIM26Q12899 539 aaPredicted RBP23.62■■□□□ 1.37
PHF1-207ENST00000479029 THRAP3Q9Y2W1 955 aaKnown RBP23.62■■□□□ 1.37
PHF1-207ENST00000479029 AATKQ6ZMQ8 1374 aa23.61■■□□□ 1.37
PHF1-207ENST00000479029 SBNO2Q9Y2G9 1366 aa23.61■■□□□ 1.37
PHF1-207ENST00000479029 EN1Q05925 392 aaPredicted RBP23.6■■□□□ 1.37
PHF1-207ENST00000479029 TTC21AQ8NDW8 1320 aa23.59■■□□□ 1.37
PHF1-207ENST00000479029 KCNH5Q8NCM2 988 aa23.59■■□□□ 1.37
PHF1-207ENST00000479029 LMO7Q8WWI1 1683 aa23.59■■□□□ 1.37
PHF1-207ENST00000479029 COL5A2P05997 1499 aaPredicted RBP23.58■■□□□ 1.37
PHF1-207ENST00000479029 KTN1Q86UP2 1357 aaKnown RBP23.58■■□□□ 1.37
PHF1-207ENST00000479029 SLIT3O75094 1523 aa23.58■■□□□ 1.36
PHF1-207ENST00000479029 CPSF1Q10570 1443 aaKnown RBP23.58■■□□□ 1.36
PHF1-207ENST00000479029 TRIM37O94972 964 aa23.57■■□□□ 1.36
PHF1-207ENST00000479029 CRB1P82279 1406 aa23.56■■□□□ 1.36
PHF1-207ENST00000479029 ARHGEF25Q86VW2 580 aa23.55■■□□□ 1.36
PHF1-207ENST00000479029 TMC1Q8TDI8 760 aa23.55■■□□□ 1.36
PHF1-207ENST00000479029 SOX12O15370 315 aa23.54■■□□□ 1.36
PHF1-207ENST00000479029 TOM1L2Q6ZVM7 507 aa23.54■■□□□ 1.36
PHF1-207ENST00000479029 PIK3C2AO00443 1686 aa23.54■■□□□ 1.36
PHF1-207ENST00000479029 AXIN2Q9Y2T1 843 aa23.53■■□□□ 1.36
PHF1-207ENST00000479029 RGPD1P0DJD0 1748 aa23.53■■□□□ 1.36
PHF1-207ENST00000479029 DISP2A7MBM2 1401 aa23.52■■□□□ 1.36
PHF1-207ENST00000479029 APBA3O96018 575 aa23.52■■□□□ 1.36
PHF1-207ENST00000479029 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.52■■□□□ 1.36
PHF1-207ENST00000479029 HDGFL2Q7Z4V5 671 aaPredicted RBP23.51■■□□□ 1.35
PHF1-207ENST00000479029 PSDA5PKW4 1024 aaPredicted RBP23.5■■□□□ 1.35
PHF1-207ENST00000479029 C11orf95C9JLR9 678 aaPredicted RBP23.5■■□□□ 1.35
PHF1-207ENST00000479029 EZH2Q15910 746 aaKnown RBP23.5■■□□□ 1.35
PHF1-207ENST00000479029 PUS7Q96PZ0 661 aaKnown RBP23.5■■□□□ 1.35
PHF1-207ENST00000479029 SLC12A5Q9H2X9 1139 aa23.5■■□□□ 1.35
PHF1-207ENST00000479029 WDR17Q8IZU2 1322 aa23.5■■□□□ 1.35
PHF1-207ENST00000479029 CAMKK2Q96RR4 588 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms