RNA–Protein interactions for RNA: ENST00000479003.5

CHKB-208, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-208ENST00000479003 CDC42BPGQ6DT37 1551 aa36.01■■■■□ 3.35
CHKB-208ENST00000479003 MORC1Q86VD1 984 aa36.01■■■■□ 3.35
CHKB-208ENST00000479003 LMTK3Q96Q04 1460 aa36■■■■□ 3.35
CHKB-208ENST00000479003 POLR3AO14802 1390 aaPredicted RBP36■■■■□ 3.35
CHKB-208ENST00000479003 NSD2O96028 1365 aa36■■■■□ 3.35
CHKB-208ENST00000479003 TRMT2AQ8IZ69 625 aaKnown RBP36■■■■□ 3.35
CHKB-208ENST00000479003 CCDC146Q8IYE0 955 aa35.99■■■■□ 3.35
CHKB-208ENST00000479003 RBM33Q96EV2 1170 aaKnown RBP35.98■■■■□ 3.35
CHKB-208ENST00000479003 NALCNQ8IZF0 1738 aa35.97■■■■□ 3.35
CHKB-208ENST00000479003 TNNT2P45379 298 aaPredicted RBP35.96■■■■□ 3.35
CHKB-208ENST00000479003 NGEFQ8N5V2 710 aa35.96■■■■□ 3.35
CHKB-208ENST00000479003 NWD1Q149M9 1564 aa35.95■■■■□ 3.35
CHKB-208ENST00000479003 APAF1O14727 1248 aa35.95■■■■□ 3.34
CHKB-208ENST00000479003 MS4A1P11836 297 aa35.95■■■■□ 3.34
CHKB-208ENST00000479003 ANP32AP39687 249 aaKnown RBP35.95■■■■□ 3.34
CHKB-208ENST00000479003 FYB1O15117 783 aa35.94■■■■□ 3.34
CHKB-208ENST00000479003 C20orf194Q5TEA3 1177 aa35.94■■■■□ 3.34
CHKB-208ENST00000479003 GGNBP2Q9H3C7 697 aa35.94■■■■□ 3.34
CHKB-208ENST00000479003 NOP58Q9Y2X3 529 aaKnown RBP35.93■■■■□ 3.34
CHKB-208ENST00000479003 NKTRP30414 1462 aaKnown RBP35.93■■■■□ 3.34
CHKB-208ENST00000479003 AKAP12Q02952 1782 aa35.93■■■■□ 3.34
CHKB-208ENST00000479003 ITSN1Q15811 1721 aa35.93■■■■□ 3.34
CHKB-208ENST00000479003 SHPRHQ149N8 1683 aa35.92■■■■□ 3.34
CHKB-208ENST00000479003 MON2Q7Z3U7 1717 aa35.92■■■■□ 3.34
CHKB-208ENST00000479003 KIF20BQ96Q89 1820 aa35.92■■■■□ 3.34
CHKB-208ENST00000479003 SUGP2Q8IX01 1082 aaKnown RBP eCLIP35.91■■■■□ 3.34
CHKB-208ENST00000479003 ANKRD26Q9UPS8 1709 aa35.9■■■■□ 3.34
CHKB-208ENST00000479003 RGPD8O14715 1765 aaPredicted RBP35.9■■■■□ 3.34
CHKB-208ENST00000479003 EDC4Q6P2E9 1401 aaKnown RBP35.9■■■■□ 3.34
CHKB-208ENST00000479003 GOLGA6L2Q8N9W4 650 aaPredicted RBP35.89■■■■□ 3.34
CHKB-208ENST00000479003 FMN2Q9NZ56 1722 aa35.88■■■■□ 3.33
CHKB-208ENST00000479003 IPO9Q96P70 1041 aaKnown RBP35.87■■■■□ 3.33
CHKB-208ENST00000479003 PLEKHG3A1L390 1219 aa35.86■■■■□ 3.33
CHKB-208ENST00000479003 ACEP12821 1306 aa35.85■■■■□ 3.33
CHKB-208ENST00000479003 ADGRL3Q9HAR2 1447 aa35.85■■■■□ 3.33
CHKB-208ENST00000479003 E9PSI1 815 aa35.85■■■■□ 3.33
CHKB-208ENST00000479003 SPINK5Q9NQ38 1064 aaPredicted RBP35.85■■■■□ 3.33
CHKB-208ENST00000479003 PDE4AP27815 886 aa35.84■■■■□ 3.33
CHKB-208ENST00000479003 ANKARQ7Z5J8 1434 aa35.82■■■■□ 3.33
CHKB-208ENST00000479003 STRCQ7RTU9 1775 aa35.82■■■■□ 3.32
CHKB-208ENST00000479003 ZNF692Q9BU19 519 aaPredicted RBP35.81■■■■□ 3.32
CHKB-208ENST00000479003 KDM2BQ8NHM5 1336 aa35.81■■■■□ 3.32
CHKB-208ENST00000479003 BACH2Q9BYV9 841 aa35.81■■■■□ 3.32
CHKB-208ENST00000479003 PMFBP1Q8TBY8 1022 aa35.8■■■■□ 3.32
CHKB-208ENST00000479003 NRKQ7Z2Y5 1582 aa35.8■■■■□ 3.32
CHKB-208ENST00000479003 STRCP1A6NGW2 1772 aa35.79■■■■□ 3.32
CHKB-208ENST00000479003 NME9Q86XW9 330 aa35.78■■■■□ 3.32
CHKB-208ENST00000479003 PAK3O75914 559 aaPredicted RBP35.78■■■■□ 3.32
CHKB-208ENST00000479003 MTHFSP49914 203 aa35.77■■■■□ 3.32
CHKB-208ENST00000479003 USP6P35125 1406 aa35.76■■■■□ 3.32
CHKB-208ENST00000479003 C14orf37Q86TY3 774 aa35.75■■■■□ 3.31
CHKB-208ENST00000479003 PROSER2Q86WR7 435 aaPredicted RBP35.75■■■■□ 3.31
CHKB-208ENST00000479003 CENPQQ7L2Z9 268 aaPredicted RBP35.74■■■■□ 3.31
CHKB-208ENST00000479003 ZRANB1Q9UGI0 708 aa35.74■■■■□ 3.31
CHKB-208ENST00000479003 DMRT2Q9Y5R5 561 aa35.73■■■■□ 3.31
CHKB-208ENST00000479003 IQSEC2Q5JU85 1478 aa35.72■■■■□ 3.31
CHKB-208ENST00000479003 WWC1Q8IX03 1113 aa35.71■■■■□ 3.31
CHKB-208ENST00000479003 TTC21BQ7Z4L5 1316 aa35.7■■■■□ 3.31
CHKB-208ENST00000479003 NGDNQ8NEJ9 315 aaKnown RBP35.7■■■■□ 3.31
CHKB-208ENST00000479003 RUNDC1Q96C34 613 aa35.7■■■■□ 3.31
CHKB-208ENST00000479003 SSH2Q76I76 1423 aa35.69■■■■□ 3.3
CHKB-208ENST00000479003 ZBTB47Q9UFB7 747 aaPredicted RBP35.69■■■■□ 3.3
CHKB-208ENST00000479003 FBLN1P23142 703 aa35.66■■■■□ 3.3
CHKB-208ENST00000479003 BCAR3O75815 825 aa35.65■■■■□ 3.3
CHKB-208ENST00000479003 CFAP53Q96M91 514 aa35.65■■■■□ 3.3
CHKB-208ENST00000479003 TMEM94Q12767 1356 aa35.64■■■■□ 3.3
CHKB-208ENST00000479003 COG3Q96JB2 828 aa35.63■■■■□ 3.29
CHKB-208ENST00000479003 PHF23Q9BUL5 403 aaPredicted RBP35.63■■■■□ 3.29
CHKB-208ENST00000479003 SKAP1Q86WV1 359 aa35.62■■■■□ 3.29
CHKB-208ENST00000479003 PHF8Q9UPP1 1060 aa35.6■■■■□ 3.29
CHKB-208ENST00000479003 TCP11L2Q8N4U5 519 aa35.59■■■■□ 3.29
CHKB-208ENST00000479003 NPM2Q86SE8 214 aaKnown RBP35.59■■■■□ 3.29
CHKB-208ENST00000479003 C19orf44Q9H6X5 657 aa35.59■■■■□ 3.29
CHKB-208ENST00000479003 COL3A1P02461 1466 aaPredicted RBP35.58■■■■□ 3.29
CHKB-208ENST00000479003 OVOS2A0A0J9YW53 1432 aa35.58■■■■□ 3.29
CHKB-208ENST00000479003 OVOS2Q6IE36 1432 aa35.58■■■■□ 3.29
CHKB-208ENST00000479003 MAP2P11137 1827 aaKnown RBP35.58■■■■□ 3.29
CHKB-208ENST00000479003 NCBP3Q53F19 620 aaKnown RBP35.57■■■■□ 3.29
CHKB-208ENST00000479003 ESCO1Q5FWF5 840 aa35.57■■■■□ 3.29
CHKB-208ENST00000479003 POLKQ9UBT6 870 aa35.57■■■■□ 3.28
CHKB-208ENST00000479003 PDE3AQ14432 1141 aa35.56■■■■□ 3.28
CHKB-208ENST00000479003 TTC21AQ8NDW8 1320 aa35.56■■■■□ 3.28
CHKB-208ENST00000479003 CCDC27Q2M243 656 aa35.56■■■■□ 3.28
CHKB-208ENST00000479003 WDR63Q8IWG1 891 aa35.56■■■■□ 3.28
CHKB-208ENST00000479003 PIK3C2AO00443 1686 aa35.53■■■■□ 3.28
CHKB-208ENST00000479003 AATKQ6ZMQ8 1374 aa35.53■■■■□ 3.28
CHKB-208ENST00000479003 PNPLA6Q8IY17 1366 aa35.53■■■■□ 3.28
CHKB-208ENST00000479003 ORAI2Q96SN7 254 aa35.53■■■■□ 3.28
CHKB-208ENST00000479003 RRP7AQ9Y3A4 280 aaKnown RBP35.53■■■■□ 3.28
CHKB-208ENST00000479003 EMILIN1Q9Y6C2 1016 aa35.52■■■■□ 3.28
CHKB-208ENST00000479003 ZNF335Q9H4Z2 1342 aaPredicted RBP35.51■■■■□ 3.28
CHKB-208ENST00000479003 NCOA3Q9Y6Q9 1424 aa35.51■■■■□ 3.28
CHKB-208ENST00000479003 PPM1GO15355 546 aaPredicted RBP35.51■■■■□ 3.27
CHKB-208ENST00000479003 NEUROD2Q15784 382 aa35.51■■■■□ 3.27
CHKB-208ENST00000479003 RRS1Q15050 365 aaKnown RBP35.49■■■■□ 3.27
CHKB-208ENST00000479003 XIRP1Q702N8 1843 aaKnown RBP35.49■■■■□ 3.27
CHKB-208ENST00000479003 C1orf167Q5SNV9 1468 aa35.49■■■■□ 3.27
CHKB-208ENST00000479003 DCCP43146 1447 aa35.47■■■■□ 3.27
CHKB-208ENST00000479003 ATF3P18847 181 aa35.45■■■■□ 3.27
CHKB-208ENST00000479003 USP31Q70CQ4 1352 aa35.45■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms