RNA–Protein interactions for RNA: ENST00000478997.3

RN7SL549P-201, Transcript of RNA, 7SL, cytoplasmic 549, pseudogene, humanhuman

BASIC

Gene RN7SL549P, Length 282 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL549P-201ENST00000478997 PPIP5K1Q6PFW1 1433 aa10.92□□□□□ -0.66
RN7SL549P-201ENST00000478997 ACEP12821 1306 aa10.91□□□□□ -0.66
RN7SL549P-201ENST00000478997 PHRF1Q9P1Y6 1649 aaKnown RBP10.91□□□□□ -0.66
RN7SL549P-201ENST00000478997 COL14A1Q05707 1796 aaKnown RBP10.9□□□□□ -0.66
RN7SL549P-201ENST00000478997 EVC2Q86UK5 1308 aa10.9□□□□□ -0.66
RN7SL549P-201ENST00000478997 CLSPNQ9HAW4 1339 aa10.9□□□□□ -0.66
RN7SL549P-201ENST00000478997 SRPK2P78362 688 aaKnown RBP10.9□□□□□ -0.66
RN7SL549P-201ENST00000478997 LMOD2Q6P5Q4 547 aa10.9□□□□□ -0.66
RN7SL549P-201ENST00000478997 UNC5CLQ8IV45 518 aa10.9□□□□□ -0.66
RN7SL549P-201ENST00000478997 CABLES1Q8TDN4 633 aa10.9□□□□□ -0.66
RN7SL549P-201ENST00000478997 NRAPQ86VF7 1730 aa10.89□□□□□ -0.67
RN7SL549P-201ENST00000478997 HAP1P54257 671 aaPredicted RBP10.89□□□□□ -0.67
RN7SL549P-201ENST00000478997 CARD11Q9BXL7 1154 aa10.89□□□□□ -0.67
RN7SL549P-201ENST00000478997 CABP2Q9NPB3 220 aa10.89□□□□□ -0.67
RN7SL549P-201ENST00000478997 GLI3P10071 1580 aa10.89□□□□□ -0.67
RN7SL549P-201ENST00000478997 USP6P35125 1406 aa10.88□□□□□ -0.67
RN7SL549P-201ENST00000478997 SSH2Q76I76 1423 aa10.88□□□□□ -0.67
RN7SL549P-201ENST00000478997 NRKQ7Z2Y5 1582 aa10.88□□□□□ -0.67
RN7SL549P-201ENST00000478997 GJD4Q96KN9 370 aaPredicted RBP10.88□□□□□ -0.67
RN7SL549P-201ENST00000478997 ATAD2Q6PL18 1390 aa10.88□□□□□ -0.67
RN7SL549P-201ENST00000478997 USP19O94966 1318 aa10.87□□□□□ -0.67
RN7SL549P-201ENST00000478997 PAK3O75914 559 aaPredicted RBP10.87□□□□□ -0.67
RN7SL549P-201ENST00000478997 VPS72Q15906 364 aa10.87□□□□□ -0.67
RN7SL549P-201ENST00000478997 TIMELESSQ9UNS1 1208 aa10.87□□□□□ -0.67
RN7SL549P-201ENST00000478997 AKAP12Q02952 1782 aa10.87□□□□□ -0.67
RN7SL549P-201ENST00000478997 FAM83GA6ND36 823 aa10.86□□□□□ -0.67
RN7SL549P-201ENST00000478997 CPSF1Q10570 1443 aaKnown RBP10.85□□□□□ -0.67
RN7SL549P-201ENST00000478997 UPF1Q92900 1129 aaKnown RBP eCLIP10.85□□□□□ -0.67
RN7SL549P-201ENST00000478997 PUS7Q96PZ0 661 aaKnown RBP10.85□□□□□ -0.67
RN7SL549P-201ENST00000478997 CABP1Q9NZU7 370 aa10.85□□□□□ -0.67
RN7SL549P-201ENST00000478997 CPDO75976 1380 aa10.85□□□□□ -0.67
RN7SL549P-201ENST00000478997 SLIT3O75094 1523 aa10.84□□□□□ -0.67
RN7SL549P-201ENST00000478997 MON2Q7Z3U7 1717 aa10.84□□□□□ -0.67
RN7SL549P-201ENST00000478997 PIK3C2AO00443 1686 aa10.84□□□□□ -0.67
RN7SL549P-201ENST00000478997 LMO7Q8WWI1 1683 aa10.84□□□□□ -0.67
RN7SL549P-201ENST00000478997 KIAA0232Q92628 1395 aa10.83□□□□□ -0.68
RN7SL549P-201ENST00000478997 ONECUT3O60422 494 aaPredicted RBP10.83□□□□□ -0.68
RN7SL549P-201ENST00000478997 SLC24A1O60721 1099 aa10.83□□□□□ -0.68
RN7SL549P-201ENST00000478997 NLRP13Q86W25 1043 aa10.83□□□□□ -0.68
RN7SL549P-201ENST00000478997 ABTB2Q8N961 1025 aa10.83□□□□□ -0.68
RN7SL549P-201ENST00000478997 ZNF692Q9BU19 519 aaPredicted RBP10.83□□□□□ -0.68
RN7SL549P-201ENST00000478997 PRDM11Q9NQV5 511 aa10.83□□□□□ -0.68
RN7SL549P-201ENST00000478997 USP54Q70EL1 1684 aa10.82□□□□□ -0.68
RN7SL549P-201ENST00000478997 PLEKHG5O94827 1062 aa10.82□□□□□ -0.68
RN7SL549P-201ENST00000478997 TESK2Q96S53 571 aa10.82□□□□□ -0.68
RN7SL549P-201ENST00000478997 BTG4Q9NY30 223 aa10.82□□□□□ -0.68
RN7SL549P-201ENST00000478997 TTC21AQ8NDW8 1320 aa10.82□□□□□ -0.68
RN7SL549P-201ENST00000478997 CD163L1Q9NR16 1453 aa10.81□□□□□ -0.68
RN7SL549P-201ENST00000478997 NINLQ9Y2I6 1382 aa10.81□□□□□ -0.68
RN7SL549P-201ENST00000478997 BRWD3Q6RI45 1802 aa10.81□□□□□ -0.68
RN7SL549P-201ENST00000478997 SPATA31A5Q5VU36 1347 aa10.81□□□□□ -0.68
RN7SL549P-201ENST00000478997 SPATA31A7Q8IWB4 1347 aa10.81□□□□□ -0.68
RN7SL549P-201ENST00000478997 THSD7AQ9UPZ6 1657 aa10.8□□□□□ -0.68
RN7SL549P-201ENST00000478997 GCP02774 474 aa10.8□□□□□ -0.68
RN7SL549P-201ENST00000478997 NUTM2GQ5VZR2 741 aa10.8□□□□□ -0.68
RN7SL549P-201ENST00000478997 PCGF6Q9BYE7 350 aa10.8□□□□□ -0.68
RN7SL549P-201ENST00000478997 TTC21BQ7Z4L5 1316 aa10.8□□□□□ -0.68
RN7SL549P-201ENST00000478997 CAMTA1Q9Y6Y1 1673 aa10.79□□□□□ -0.68
RN7SL549P-201ENST00000478997 KTN1Q86UP2 1357 aaKnown RBP10.79□□□□□ -0.68
RN7SL549P-201ENST00000478997 USP47Q96K76 1375 aa10.79□□□□□ -0.68
RN7SL549P-201ENST00000478997 ST20-MTHFSA0A0A6YYL1 179 aa10.79□□□□□ -0.68
RN7SL549P-201ENST00000478997 ABCC6O95255 1503 aa10.79□□□□□ -0.68
RN7SL549P-201ENST00000478997 USP31Q70CQ4 1352 aa10.78□□□□□ -0.68
RN7SL549P-201ENST00000478997 NLRP6P59044 892 aa10.78□□□□□ -0.68
RN7SL549P-201ENST00000478997 ZC3H6P61129 1189 aaKnown RBP10.78□□□□□ -0.68
RN7SL549P-201ENST00000478997 CHRNA2Q15822 529 aa10.78□□□□□ -0.68
RN7SL549P-201ENST00000478997 SEPT12Q8IYM1 358 aa10.78□□□□□ -0.68
RN7SL549P-201ENST00000478997 EP400Q96L91 3159 aa10.78□□□□□ -0.68
RN7SL549P-201ENST00000478997 AATKQ6ZMQ8 1374 aa10.77□□□□□ -0.68
RN7SL549P-201ENST00000478997 COL18A1P39060 1754 aa10.77□□□□□ -0.68
RN7SL549P-201ENST00000478997 EDC4Q6P2E9 1401 aaKnown RBP10.77□□□□□ -0.68
RN7SL549P-201ENST00000478997 COL5A2P05997 1499 aaPredicted RBP10.77□□□□□ -0.69
RN7SL549P-201ENST00000478997 CCDC125Q86Z20 511 aa10.77□□□□□ -0.69
RN7SL549P-201ENST00000478997 CCDC9Q9Y3X0 531 aaKnown RBP10.77□□□□□ -0.69
RN7SL549P-201ENST00000478997 NFAT5O94916 1531 aa10.77□□□□□ -0.69
RN7SL549P-201ENST00000478997 SPATA31A1Q5TZJ5 1347 aa10.77□□□□□ -0.69
RN7SL549P-201ENST00000478997 A0A1W2PP64 1363 aa10.77□□□□□ -0.69
RN7SL549P-201ENST00000478997 KCNH5Q8NCM2 988 aa10.76□□□□□ -0.69
RN7SL549P-201ENST00000478997 FAM98CQ17RN3 349 aaKnown RBP10.75□□□□□ -0.69
RN7SL549P-201ENST00000478997 KRT27Q7Z3Y8 459 aa10.75□□□□□ -0.69
RN7SL549P-201ENST00000478997 HDGFL2Q7Z4V5 671 aaPredicted RBP10.75□□□□□ -0.69
RN7SL549P-201ENST00000478997 SLC12A5Q9H2X9 1139 aa10.75□□□□□ -0.69
RN7SL549P-201ENST00000478997 TERF2IPQ9NYB0 399 aa10.75□□□□□ -0.69
RN7SL549P-201ENST00000478997 OVOS2A0A0J9YW53 1432 aa10.75□□□□□ -0.69
RN7SL549P-201ENST00000478997 BLMP54132 1417 aaPredicted RBP10.75□□□□□ -0.69
RN7SL549P-201ENST00000478997 OVOS2Q6IE36 1432 aa10.75□□□□□ -0.69
RN7SL549P-201ENST00000478997 TMF1P82094 1093 aa10.74□□□□□ -0.69
RN7SL549P-201ENST00000478997 BARGINQ6ZT62 677 aa10.74□□□□□ -0.69
RN7SL549P-201ENST00000478997 ARHGEF25Q86VW2 580 aa10.74□□□□□ -0.69
RN7SL549P-201ENST00000478997 TMC1Q8TDI8 760 aa10.74□□□□□ -0.69
RN7SL549P-201ENST00000478997 CRB1P82279 1406 aa10.74□□□□□ -0.69
RN7SL549P-201ENST00000478997 PARP4Q9UKK3 1724 aaKnown RBP10.73□□□□□ -0.69
RN7SL549P-201ENST00000478997 STRN4Q9NRL3 753 aa10.73□□□□□ -0.69
RN7SL549P-201ENST00000478997 THRAP3Q9Y2W1 955 aaKnown RBP10.73□□□□□ -0.69
RN7SL549P-201ENST00000478997 ANKRD36BQ8N2N9 1353 aa10.73□□□□□ -0.69
RN7SL549P-201ENST00000478997 EVA1CP58658 441 aa10.72□□□□□ -0.69
RN7SL549P-201ENST00000478997 CDCA8Q53HL2 280 aa10.72□□□□□ -0.69
RN7SL549P-201ENST00000478997 LARP1Q6PKG0 1096 aaKnown RBP10.72□□□□□ -0.69
RN7SL549P-201ENST00000478997 CCER1Q8TC90 406 aaPredicted RBP10.72□□□□□ -0.69
RN7SL549P-201ENST00000478997 RGPD1P0DJD0 1748 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms