RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 MAP3K4Q9Y6R4 1608 aa13.8□□□□□ -0.2
LRRFIP1-211ENST00000478958 TMPOP42166 694 aaKnown RBP13.8□□□□□ -0.2
LRRFIP1-211ENST00000478958 RIPK4P57078 832 aa13.8□□□□□ -0.2
LRRFIP1-211ENST00000478958 CCDC27Q2M243 656 aa13.8□□□□□ -0.2
LRRFIP1-211ENST00000478958 ATF7IPQ6VMQ6 1270 aa13.8□□□□□ -0.2
LRRFIP1-211ENST00000478958 CFAP65Q6ZU64 1925 aaKnown RBP13.79□□□□□ -0.2
LRRFIP1-211ENST00000478958 ZCCHC11Q5TAX3 1644 aaKnown RBP13.79□□□□□ -0.2
LRRFIP1-211ENST00000478958 PPP4R3BQ5MIZ7 849 aa13.79□□□□□ -0.2
LRRFIP1-211ENST00000478958 ANP32BQ92688 251 aaKnown RBP13.79□□□□□ -0.2
LRRFIP1-211ENST00000478958 DDX19BQ9UMR2 479 aa13.79□□□□□ -0.2
LRRFIP1-211ENST00000478958 ATP7AQ04656 1500 aa13.79□□□□□ -0.2
LRRFIP1-211ENST00000478958 EVC2Q86UK5 1308 aa13.78□□□□□ -0.2
LRRFIP1-211ENST00000478958 FBLN1P23142 703 aa13.78□□□□□ -0.2
LRRFIP1-211ENST00000478958 TMEM51Q9NW97 253 aa13.78□□□□□ -0.2
LRRFIP1-211ENST00000478958 ZNF518AQ6AHZ1 1483 aa13.78□□□□□ -0.2
LRRFIP1-211ENST00000478958 C1orf115Q9H7X2 142 aa13.78□□□□□ -0.2
LRRFIP1-211ENST00000478958 ADGRL1O94910 1474 aa13.78□□□□□ -0.2
LRRFIP1-211ENST00000478958 TET3O43151 1660 aa13.78□□□□□ -0.2
LRRFIP1-211ENST00000478958 TRIM35Q9UPQ4 493 aa13.77□□□□□ -0.2
LRRFIP1-211ENST00000478958 IQSEC2Q5JU85 1478 aa13.77□□□□□ -0.2
LRRFIP1-211ENST00000478958 SBNO2Q9Y2G9 1366 aa13.77□□□□□ -0.2
LRRFIP1-211ENST00000478958 VGLL3A8MV65 326 aa13.77□□□□□ -0.21
LRRFIP1-211ENST00000478958 ELL2O00472 640 aaPredicted RBP13.77□□□□□ -0.21
LRRFIP1-211ENST00000478958 MYOM2P54296 1465 aa13.77□□□□□ -0.21
LRRFIP1-211ENST00000478958 ZNF830Q96NB3 372 aaPredicted RBP13.76□□□□□ -0.21
LRRFIP1-211ENST00000478958 MTERF4Q7Z6M4 381 aaKnown RBP13.76□□□□□ -0.21
LRRFIP1-211ENST00000478958 MINK1Q8N4C8 1332 aaPredicted RBP13.75□□□□□ -0.21
LRRFIP1-211ENST00000478958 HSP90AB1P08238 724 aaKnown RBP13.75□□□□□ -0.21
LRRFIP1-211ENST00000478958 SHPRHQ149N8 1683 aa13.75□□□□□ -0.21
LRRFIP1-211ENST00000478958 HDAC1Q13547 482 aaPredicted RBP13.74□□□□□ -0.21
LRRFIP1-211ENST00000478958 ANKRD45Q5TZF3 282 aa13.74□□□□□ -0.21
LRRFIP1-211ENST00000478958 THUMPD2Q9BTF0 503 aaKnown RBP13.74□□□□□ -0.21
LRRFIP1-211ENST00000478958 VIRMAQ69YN4 1812 aaKnown RBP13.74□□□□□ -0.21
LRRFIP1-211ENST00000478958 GRPEL1Q9HAV7 217 aa13.74□□□□□ -0.21
LRRFIP1-211ENST00000478958 TERF1P54274 439 aa13.73□□□□□ -0.21
LRRFIP1-211ENST00000478958 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.73□□□□□ -0.21
LRRFIP1-211ENST00000478958 SMC5Q8IY18 1101 aa13.73□□□□□ -0.21
LRRFIP1-211ENST00000478958 PLEKHF1Q96S99 279 aa13.73□□□□□ -0.21
LRRFIP1-211ENST00000478958 ZBTB40Q9NUA8 1239 aa13.73□□□□□ -0.21
LRRFIP1-211ENST00000478958 SHROOM2Q13796 1616 aa13.73□□□□□ -0.21
LRRFIP1-211ENST00000478958 CD109Q6YHK3 1445 aa13.73□□□□□ -0.21
LRRFIP1-211ENST00000478958 OFD1O75665 1012 aa13.73□□□□□ -0.21
LRRFIP1-211ENST00000478958 RBM42Q9BTD8 480 aaKnown RBP13.72□□□□□ -0.21
LRRFIP1-211ENST00000478958 ANKRD36BQ8N2N9 1353 aa13.72□□□□□ -0.21
LRRFIP1-211ENST00000478958 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.72□□□□□ -0.216e-7■■□□□ 12.7
LRRFIP1-211ENST00000478958 TNPO1Q92973 898 aaKnown RBP13.72□□□□□ -0.21
LRRFIP1-211ENST00000478958 ZFP91Q96JP5 570 aaPredicted RBP13.72□□□□□ -0.21
LRRFIP1-211ENST00000478958 A0A1W2PP64 1363 aa13.71□□□□□ -0.21
LRRFIP1-211ENST00000478958 CHD1LQ86WJ1 897 aa13.71□□□□□ -0.21
LRRFIP1-211ENST00000478958 MROH2AA6NES4 1674 aa13.71□□□□□ -0.21
LRRFIP1-211ENST00000478958 KIAA1210Q9ULL0 1709 aa13.71□□□□□ -0.21
LRRFIP1-211ENST00000478958 FYB1O15117 783 aa13.71□□□□□ -0.22
LRRFIP1-211ENST00000478958 IPO8O15397 1037 aaKnown RBP13.71□□□□□ -0.22
LRRFIP1-211ENST00000478958 CD2BP2O95400 341 aaKnown RBP13.71□□□□□ -0.22
LRRFIP1-211ENST00000478958 HMOX1P09601 288 aa13.71□□□□□ -0.22
LRRFIP1-211ENST00000478958 DEPDC5O75140 1603 aa13.71□□□□□ -0.22
LRRFIP1-211ENST00000478958 NPATQ14207 1427 aa13.71□□□□□ -0.22
LRRFIP1-211ENST00000478958 DIAPH1O60610 1272 aaKnown RBP13.7□□□□□ -0.22
LRRFIP1-211ENST00000478958 KIF1BO60333 1816 aa13.7□□□□□ -0.22
LRRFIP1-211ENST00000478958 VGFO15240 615 aaPredicted RBP13.7□□□□□ -0.22
LRRFIP1-211ENST00000478958 CT47B1P0C2W7 299 aaPredicted RBP13.7□□□□□ -0.22
LRRFIP1-211ENST00000478958 NUCB1Q02818 461 aa13.7□□□□□ -0.22
LRRFIP1-211ENST00000478958 ZNF692Q9BU19 519 aaPredicted RBP13.7□□□□□ -0.22
LRRFIP1-211ENST00000478958 R3HCC1Q9Y3T6 440 aaKnown RBP13.7□□□□□ -0.22
LRRFIP1-211ENST00000478958 VWDEQ8N2E2 1590 aa13.7□□□□□ -0.22
LRRFIP1-211ENST00000478958 DDX11L8A8MPP1 907 aa13.69□□□□□ -0.22
LRRFIP1-211ENST00000478958 KIF20AO95235 890 aa13.69□□□□□ -0.22
LRRFIP1-211ENST00000478958 ZSCAN20P17040 1043 aaPredicted RBP13.69□□□□□ -0.22
LRRFIP1-211ENST00000478958 NCBP3Q53F19 620 aaKnown RBP13.69□□□□□ -0.22
LRRFIP1-211ENST00000478958 EFCAB6Q5THR3 1501 aa13.69□□□□□ -0.22
LRRFIP1-211ENST00000478958 CDK11BP21127 795 aaKnown RBP13.69□□□□□ -0.22
LRRFIP1-211ENST00000478958 ZMYM3Q14202 1370 aa13.69□□□□□ -0.22
LRRFIP1-211ENST00000478958 PRKAR2BP31323 418 aa13.69□□□□□ -0.22
LRRFIP1-211ENST00000478958 KIF16BQ96L93 1317 aa13.69□□□□□ -0.22
LRRFIP1-211ENST00000478958 NRXN1Q9ULB1 1477 aa13.68□□□□□ -0.22
LRRFIP1-211ENST00000478958 BRD2P25440 801 aaKnown RBP13.68□□□□□ -0.22
LRRFIP1-211ENST00000478958 PRAM1Q96QH2 718 aa13.68□□□□□ -0.22
LRRFIP1-211ENST00000478958 MROH1Q8NDA8 1641 aa13.68□□□□□ -0.22
LRRFIP1-211ENST00000478958 GAS2L3Q86XJ1 694 aa13.68□□□□□ -0.22
LRRFIP1-211ENST00000478958 PPRC1Q5VV67 1664 aaKnown RBP13.68□□□□□ -0.22
LRRFIP1-211ENST00000478958 TSPYL6Q8N831 410 aa13.67□□□□□ -0.22
LRRFIP1-211ENST00000478958 QRICH2Q9H0J4 1663 aa13.67□□□□□ -0.22
LRRFIP1-211ENST00000478958 UQCRHLA0A096LP55 91 aa13.67□□□□□ -0.22
LRRFIP1-211ENST00000478958 UQCRHP07919 91 aa13.67□□□□□ -0.22
LRRFIP1-211ENST00000478958 MSNP26038 577 aaKnown RBP13.67□□□□□ -0.22
LRRFIP1-211ENST00000478958 INO80Q9ULG1 1556 aaPredicted RBP13.66□□□□□ -0.22
LRRFIP1-211ENST00000478958 IDI1Q13907 227 aa13.66□□□□□ -0.22
LRRFIP1-211ENST00000478958 TERF2IPQ9NYB0 399 aa13.66□□□□□ -0.22
LRRFIP1-211ENST00000478958 RAPGEF3O95398 923 aa13.66□□□□□ -0.22
LRRFIP1-211ENST00000478958 RBM25P49756 843 aaKnown RBP13.66□□□□□ -0.22
LRRFIP1-211ENST00000478958 DHX37Q8IY37 1157 aaKnown RBP13.66□□□□□ -0.22
LRRFIP1-211ENST00000478958 GTPBP4Q9BZE4 634 aaKnown RBP13.66□□□□□ -0.22
LRRFIP1-211ENST00000478958 CABP1Q9NZU7 370 aa13.66□□□□□ -0.22
LRRFIP1-211ENST00000478958 ISY1Q9ULR0 285 aaKnown RBP13.66□□□□□ -0.22
LRRFIP1-211ENST00000478958 UHRF1BP1LA0JNW5 1464 aa13.66□□□□□ -0.22
LRRFIP1-211ENST00000478958 ADGRB1O14514 1584 aa13.66□□□□□ -0.22
LRRFIP1-211ENST00000478958 TBC1D9Q6ZT07 1266 aa13.65□□□□□ -0.22
LRRFIP1-211ENST00000478958 PHACTR3Q96KR7 559 aa13.65□□□□□ -0.22
LRRFIP1-211ENST00000478958 CCDC94Q9BW85 323 aaPredicted RBP13.65□□□□□ -0.22
LRRFIP1-211ENST00000478958 APBB1O00213 710 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms