RNA–Protein interactions for RNA: ENST00000478660.6

RUNX2-207, Transcript of runt related transcription factor 2, humanhuman

TSL 5

Gene RUNX2, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX2-207ENST00000478660 U2AF1Q01081 240 aaKnown RBP eCLIP29.46■■■□□ 2.31
RUNX2-207ENST00000478660 ESF1Q9H501 851 aaKnown RBP29.46■■■□□ 2.31
RUNX2-207ENST00000478660 RIMS1Q86UR5 1692 aaKnown RBP29.45■■■□□ 2.3
RUNX2-207ENST00000478660 FTSJ3Q8IY81 847 aaKnown RBP29.44■■■□□ 2.3
RUNX2-207ENST00000478660 CAMSAP1Q5T5Y3 1602 aa29.44■■■□□ 2.3
RUNX2-207ENST00000478660 PIK3C2BO00750 1634 aa29.43■■■□□ 2.3
RUNX2-207ENST00000478660 HDAC1Q13547 482 aaPredicted RBP29.42■■■□□ 2.3
RUNX2-207ENST00000478660 L1TD1Q5T7N2 865 aaKnown RBP29.42■■■□□ 2.3
RUNX2-207ENST00000478660 NEXMIFQ5QGS0 1516 aa29.4■■■□□ 2.3
RUNX2-207ENST00000478660 COL3A1P02461 1466 aaPredicted RBP29.39■■■□□ 2.3
RUNX2-207ENST00000478660 ABCC11Q96J66 1382 aa29.39■■■□□ 2.29
RUNX2-207ENST00000478660 ANKRD26Q9UPS8 1709 aa29.38■■■□□ 2.29
RUNX2-207ENST00000478660 PLEKHF1Q96S99 279 aa29.38■■■□□ 2.29
RUNX2-207ENST00000478660 DDX19BQ9UMR2 479 aa29.38■■■□□ 2.29
RUNX2-207ENST00000478660 SMC4Q9NTJ3 1288 aa29.37■■■□□ 2.29
RUNX2-207ENST00000478660 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.37■■■□□ 2.29
RUNX2-207ENST00000478660 IL16Q14005 1332 aa29.36■■■□□ 2.29
RUNX2-207ENST00000478660 EXOSC9Q06265 439 aaKnown RBP29.36■■■□□ 2.29
RUNX2-207ENST00000478660 TSR2Q969E8 191 aaKnown RBP29.36■■■□□ 2.29
RUNX2-207ENST00000478660 C22orf23Q9BZE7 217 aa29.36■■■□□ 2.29
RUNX2-207ENST00000478660 TRIM27P14373 513 aa29.35■■■□□ 2.29
RUNX2-207ENST00000478660 TMPOP42166 694 aaKnown RBP29.35■■■□□ 2.29
RUNX2-207ENST00000478660 VGFO15240 615 aaPredicted RBP29.34■■■□□ 2.29
RUNX2-207ENST00000478660 KDM4FA0A1W2PPD8 638 aa29.33■■■□□ 2.29
RUNX2-207ENST00000478660 TRIM35Q9UPQ4 493 aa29.33■■■□□ 2.29
RUNX2-207ENST00000478660 C3P01024 1663 aa29.33■■■□□ 2.29
RUNX2-207ENST00000478660 ATF7IPQ6VMQ6 1270 aa29.33■■■□□ 2.29
RUNX2-207ENST00000478660 A0A1W2PP64 1363 aa29.33■■■□□ 2.29
RUNX2-207ENST00000478660 SSH1Q8WYL5 1049 aa29.32■■■□□ 2.28
RUNX2-207ENST00000478660 CABP2Q9NPB3 220 aa29.32■■■□□ 2.28
RUNX2-207ENST00000478660 ARHGAP31Q2M1Z3 1444 aa29.32■■■□□ 2.28
RUNX2-207ENST00000478660 SMC5Q8IY18 1101 aa29.32■■■□□ 2.28
RUNX2-207ENST00000478660 MED14O60244 1454 aa29.31■■■□□ 2.28
RUNX2-207ENST00000478660 MCM4P33991 863 aa29.3■■■□□ 2.28
RUNX2-207ENST00000478660 PTPRMP28827 1452 aa29.3■■■□□ 2.28
RUNX2-207ENST00000478660 CHMP5Q9NZZ3 219 aa29.29■■■□□ 2.28
RUNX2-207ENST00000478660 ITPRIPQ8IWB1 547 aa29.29■■■□□ 2.28
RUNX2-207ENST00000478660 MFAP1P55081 439 aaKnown RBP29.28■■■□□ 2.28
RUNX2-207ENST00000478660 U2SURPO15042 1029 aaKnown RBP29.27■■■□□ 2.28
RUNX2-207ENST00000478660 ZFYVE9O95405 1425 aa29.27■■■□□ 2.28
RUNX2-207ENST00000478660 NOB1Q9ULX3 412 aaKnown RBP29.26■■■□□ 2.27
RUNX2-207ENST00000478660 KIF16BQ96L93 1317 aa29.25■■■□□ 2.27
RUNX2-207ENST00000478660 ZBTB40Q9NUA8 1239 aa29.25■■■□□ 2.27
RUNX2-207ENST00000478660 PRKCSHP14314 528 aaPredicted RBP29.24■■■□□ 2.27
RUNX2-207ENST00000478660 RSPH6AQ9H0K4 717 aa29.24■■■□□ 2.27
RUNX2-207ENST00000478660 FSD2A1L4K1 749 aa29.23■■■□□ 2.27
RUNX2-207ENST00000478660 ATAD2Q6PL18 1390 aa29.23■■■□□ 2.27
RUNX2-207ENST00000478660 PREX1Q8TCU6 1659 aa29.23■■■□□ 2.27
RUNX2-207ENST00000478660 TMEM57Q8N5G2 664 aa29.22■■■□□ 2.27
RUNX2-207ENST00000478660 GGNBP2Q9H3C7 697 aa29.22■■■□□ 2.27
RUNX2-207ENST00000478660 IPO8O15397 1037 aaKnown RBP29.22■■■□□ 2.27
RUNX2-207ENST00000478660 SPRYD3Q8NCJ5 442 aa29.21■■■□□ 2.27
RUNX2-207ENST00000478660 NCOA3Q9Y6Q9 1424 aa29.21■■■□□ 2.27
RUNX2-207ENST00000478660 NUTM2DQ5VT03 806 aaPredicted RBP29.21■■■□□ 2.27
RUNX2-207ENST00000478660 PNNQ9H307 717 aaKnown RBP29.21■■■□□ 2.27
RUNX2-207ENST00000478660 GOLGA6L3A6NEY3 463 aa29.2■■■□□ 2.27
RUNX2-207ENST00000478660 ALDH1L2Q3SY69 923 aa29.2■■■□□ 2.27
RUNX2-207ENST00000478660 CDC42BPGQ6DT37 1551 aa29.2■■■□□ 2.26
RUNX2-207ENST00000478660 SPATA31D1Q6ZQQ2 1576 aa29.2■■■□□ 2.26
RUNX2-207ENST00000478660 HSCBQ8IWL3 235 aa29.2■■■□□ 2.26
RUNX2-207ENST00000478660 CD163L1Q9NR16 1453 aa29.19■■■□□ 2.26
RUNX2-207ENST00000478660 RIPK4P57078 832 aa29.19■■■□□ 2.26
RUNX2-207ENST00000478660 PNPLA6Q8IY17 1366 aa29.19■■■□□ 2.26
RUNX2-207ENST00000478660 FYB1O15117 783 aa29.19■■■□□ 2.26
RUNX2-207ENST00000478660 SRPK2P78362 688 aaKnown RBP29.19■■■□□ 2.26
RUNX2-207ENST00000478660 NUCB1Q02818 461 aa29.19■■■□□ 2.26
RUNX2-207ENST00000478660 TERF2IPQ9NYB0 399 aa29.19■■■□□ 2.26
RUNX2-207ENST00000478660 CEBPAP49715 358 aaPredicted RBP29.18■■■□□ 2.26
RUNX2-207ENST00000478660 RBM25P49756 843 aaKnown RBP29.18■■■□□ 2.26
RUNX2-207ENST00000478660 ZNF692Q9BU19 519 aaPredicted RBP29.17■■■□□ 2.26
RUNX2-207ENST00000478660 XRCC6P12956 609 aaKnown RBP eCLIP29.16■■■□□ 2.26
RUNX2-207ENST00000478660 SAFB2Q14151 953 aaKnown RBP eCLIP29.16■■■□□ 2.26
RUNX2-207ENST00000478660 KIF20BQ96Q89 1820 aa29.16■■■□□ 2.26
RUNX2-207ENST00000478660 DIAPH1O60610 1272 aaKnown RBP29.16■■■□□ 2.26
RUNX2-207ENST00000478660 SNX21Q969T3 373 aa29.15■■■□□ 2.26
RUNX2-207ENST00000478660 TRAK2O60296 914 aa29.14■■■□□ 2.26
RUNX2-207ENST00000478660 PLPPR3Q6T4P5 718 aa29.14■■■□□ 2.26
RUNX2-207ENST00000478660 BRPF1P55201 1214 aaPredicted RBP29.14■■■□□ 2.25
RUNX2-207ENST00000478660 RRAGDQ9NQL2 400 aaPredicted RBP29.14■■■□□ 2.25
RUNX2-207ENST00000478660 DDIT3P35638 169 aa29.13■■■□□ 2.25
RUNX2-207ENST00000478660 FBXO31Q5XUX0 539 aaPredicted RBP29.13■■■□□ 2.25
RUNX2-207ENST00000478660 ZNF428Q96B54 188 aa29.13■■■□□ 2.25
RUNX2-207ENST00000478660 MYO5BQ9ULV0 1848 aa29.13■■■□□ 2.25
RUNX2-207ENST00000478660 DDX11L8A8MPP1 907 aa29.12■■■□□ 2.25
RUNX2-207ENST00000478660 PPIP5K1Q6PFW1 1433 aa29.12■■■□□ 2.25
RUNX2-207ENST00000478660 LRRC7Q96NW7 1537 aa29.11■■■□□ 2.25
RUNX2-207ENST00000478660 TNRQ92752 1358 aa29.11■■■□□ 2.25
RUNX2-207ENST00000478660 IDI1Q13907 227 aa29.1■■■□□ 2.25
RUNX2-207ENST00000478660 CHD1LQ86WJ1 897 aa29.1■■■□□ 2.25
RUNX2-207ENST00000478660 STK26Q9P289 416 aa29.1■■■□□ 2.25
RUNX2-207ENST00000478660 FCHSD2O94868 740 aa29.09■■■□□ 2.25
RUNX2-207ENST00000478660 SLC52A1Q9NWF4 448 aa29.09■■■□□ 2.25
RUNX2-207ENST00000478660 TMEM131LA2VDJ0 1609 aa29.09■■■□□ 2.25
RUNX2-207ENST00000478660 FAM135BQ49AJ0 1406 aa29.08■■■□□ 2.25
RUNX2-207ENST00000478660 BMP2KLQ5H9B9 411 aa29.08■■■□□ 2.25
RUNX2-207ENST00000478660 HDGFL2Q7Z4V5 671 aaPredicted RBP29.07■■■□□ 2.24
RUNX2-207ENST00000478660 LNPKQ9C0E8 428 aa29.07■■■□□ 2.24
RUNX2-207ENST00000478660 GZF1Q9H116 711 aaPredicted RBP29.07■■■□□ 2.24
RUNX2-207ENST00000478660 YTHDC2Q9H6S0 1430 aaKnown RBP29.07■■■□□ 2.24
RUNX2-207ENST00000478660 CIZ1Q9ULV3 898 aaPredicted RBP29.06■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms