RNA–Protein interactions for RNA: ENST00000478359.5

TRAF3IP3-213, Transcript of TRAF3 interacting protein 3, humanhuman

TSL 1 (best)

Gene TRAF3IP3, Length 1,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3-213ENST00000478359 U2AF1L5P0DN76 240 aaPredicted RBP16.29■□□□□ 0.2
TRAF3IP3-213ENST00000478359 U2AF1Q01081 240 aaKnown RBP eCLIP16.29■□□□□ 0.2
TRAF3IP3-213ENST00000478359 TCP11L2Q8N4U5 519 aa16.29■□□□□ 0.2
TRAF3IP3-213ENST00000478359 ROBO2Q9HCK4 1378 aa16.29■□□□□ 0.2
TRAF3IP3-213ENST00000478359 AATKQ6ZMQ8 1374 aa16.27■□□□□ 0.2
TRAF3IP3-213ENST00000478359 DIAPH1O60610 1272 aaKnown RBP16.27■□□□□ 0.2
TRAF3IP3-213ENST00000478359 PIK3R4Q99570 1358 aa16.27■□□□□ 0.19
TRAF3IP3-213ENST00000478359 EXOC6Q8TAG9 804 aa16.27■□□□□ 0.19
TRAF3IP3-213ENST00000478359 TOPAZ1Q8N9V7 1692 aa16.26■□□□□ 0.19
TRAF3IP3-213ENST00000478359 CEP170BQ9Y4F5 1589 aaPredicted RBP16.26■□□□□ 0.19
TRAF3IP3-213ENST00000478359 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.25■□□□□ 0.19
TRAF3IP3-213ENST00000478359 MAPK8IP3Q9UPT6 1336 aa16.25■□□□□ 0.19
TRAF3IP3-213ENST00000478359 RBM19Q9Y4C8 960 aaKnown RBP16.25■□□□□ 0.19
TRAF3IP3-213ENST00000478359 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.24■□□□□ 0.19
TRAF3IP3-213ENST00000478359 MYH16Q9H6N6 1097 aa16.24■□□□□ 0.19
TRAF3IP3-213ENST00000478359 COG3Q96JB2 828 aa16.23■□□□□ 0.19
TRAF3IP3-213ENST00000478359 CDK12Q9NYV4 1490 aaPredicted RBP16.23■□□□□ 0.19
TRAF3IP3-213ENST00000478359 ZNF142P52746 1687 aaPredicted RBP16.23■□□□□ 0.19
TRAF3IP3-213ENST00000478359 PLEKHG3A1L390 1219 aa16.22■□□□□ 0.19
TRAF3IP3-213ENST00000478359 U2SURPO15042 1029 aaKnown RBP16.22■□□□□ 0.19
TRAF3IP3-213ENST00000478359 FCHSD2O94868 740 aa16.22■□□□□ 0.19
TRAF3IP3-213ENST00000478359 NEFMP07197 916 aa16.22■□□□□ 0.19
TRAF3IP3-213ENST00000478359 CT47B1P0C2W7 299 aaPredicted RBP16.22■□□□□ 0.19
TRAF3IP3-213ENST00000478359 PTPRUQ92729 1446 aa16.22■□□□□ 0.19
TRAF3IP3-213ENST00000478359 MAP2P11137 1827 aaKnown RBP16.22■□□□□ 0.19
TRAF3IP3-213ENST00000478359 PLEKHF1Q96S99 279 aa16.22■□□□□ 0.19
TRAF3IP3-213ENST00000478359 SPINK5Q9NQ38 1064 aaPredicted RBP16.22■□□□□ 0.19
TRAF3IP3-213ENST00000478359 AMOTL2Q9Y2J4 779 aa16.22■□□□□ 0.19
TRAF3IP3-213ENST00000478359 RIMS1Q86UR5 1692 aaKnown RBP16.22■□□□□ 0.19
TRAF3IP3-213ENST00000478359 XRN1Q8IZH2 1706 aaKnown RBP16.21■□□□□ 0.19
TRAF3IP3-213ENST00000478359 NRKQ7Z2Y5 1582 aa16.21■□□□□ 0.19
TRAF3IP3-213ENST00000478359 SLC26A8Q96RN1 970 aa16.21■□□□□ 0.19
TRAF3IP3-213ENST00000478359 POLKQ9UBT6 870 aa16.21■□□□□ 0.19
TRAF3IP3-213ENST00000478359 PLIN1O60240 522 aa16.2■□□□□ 0.18
TRAF3IP3-213ENST00000478359 NEUROD2Q15784 382 aa16.2■□□□□ 0.18
TRAF3IP3-213ENST00000478359 IL16Q14005 1332 aa16.2■□□□□ 0.18
TRAF3IP3-213ENST00000478359 PRR36Q9H6K5 1346 aa16.2■□□□□ 0.18
TRAF3IP3-213ENST00000478359 CRBNQ96SW2 442 aa16.19■□□□□ 0.18
TRAF3IP3-213ENST00000478359 ADAMTSL3P82987 1691 aa16.19■□□□□ 0.18
TRAF3IP3-213ENST00000478359 PDE3AQ14432 1141 aa16.18■□□□□ 0.18
TRAF3IP3-213ENST00000478359 TMPOP42166 694 aaKnown RBP16.18■□□□□ 0.18
TRAF3IP3-213ENST00000478359 AAMPQ13685 434 aa16.18■□□□□ 0.18
TRAF3IP3-213ENST00000478359 RRP7AQ9Y3A4 280 aaKnown RBP16.18■□□□□ 0.18
TRAF3IP3-213ENST00000478359 NME9Q86XW9 330 aa16.17■□□□□ 0.18
TRAF3IP3-213ENST00000478359 DMRT2Q9Y5R5 561 aa16.17■□□□□ 0.18
TRAF3IP3-213ENST00000478359 USP6P35125 1406 aa16.17■□□□□ 0.18
TRAF3IP3-213ENST00000478359 ANKARQ7Z5J8 1434 aa16.17■□□□□ 0.18
TRAF3IP3-213ENST00000478359 ACEP12821 1306 aa16.16■□□□□ 0.18
TRAF3IP3-213ENST00000478359 TTC21AQ8NDW8 1320 aa16.16■□□□□ 0.18
TRAF3IP3-213ENST00000478359 TTC21BQ7Z4L5 1316 aa16.16■□□□□ 0.18
TRAF3IP3-213ENST00000478359 SETD1BQ9UPS6 1966 aaKnown RBP16.15■□□□□ 0.18
TRAF3IP3-213ENST00000478359 LRRC7Q96NW7 1537 aa16.15■□□□□ 0.18
TRAF3IP3-213ENST00000478359 ANKLE2Q86XL3 938 aa16.15■□□□□ 0.18
TRAF3IP3-213ENST00000478359 NALCNQ8IZF0 1738 aa16.14■□□□□ 0.17
TRAF3IP3-213ENST00000478359 TCERG1O14776 1098 aaKnown RBP16.14■□□□□ 0.17
TRAF3IP3-213ENST00000478359 PLPPR3Q6T4P5 718 aa16.14■□□□□ 0.17
TRAF3IP3-213ENST00000478359 CALD1Q05682 793 aaKnown RBP16.14■□□□□ 0.17
TRAF3IP3-213ENST00000478359 FANCIQ9NVI1 1328 aa16.14■□□□□ 0.17
TRAF3IP3-213ENST00000478359 OVOS2A0A0J9YW53 1432 aa16.14■□□□□ 0.17
TRAF3IP3-213ENST00000478359 OVOS2Q6IE36 1432 aa16.14■□□□□ 0.17
TRAF3IP3-213ENST00000478359 PPM1GO15355 546 aaPredicted RBP16.13■□□□□ 0.17
TRAF3IP3-213ENST00000478359 RSPH6AQ9H0K4 717 aa16.13■□□□□ 0.17
TRAF3IP3-213ENST00000478359 NCKAP5LQ9HCH0 1330 aa16.12■□□□□ 0.17
TRAF3IP3-213ENST00000478359 CANXP27824 592 aaKnown RBP16.12■□□□□ 0.17
TRAF3IP3-213ENST00000478359 RARSP54136 660 aaKnown RBP16.12■□□□□ 0.17
TRAF3IP3-213ENST00000478359 RIPK4P57078 832 aa16.12■□□□□ 0.17
TRAF3IP3-213ENST00000478359 C20orf194Q5TEA3 1177 aa16.12■□□□□ 0.17
TRAF3IP3-213ENST00000478359 CENPQQ7L2Z9 268 aaPredicted RBP16.12■□□□□ 0.17
TRAF3IP3-213ENST00000478359 SSH2Q76I76 1423 aa16.12■□□□□ 0.17
TRAF3IP3-213ENST00000478359 BCAR3O75815 825 aa16.12■□□□□ 0.17
TRAF3IP3-213ENST00000478359 MS4A1P11836 297 aa16.12■□□□□ 0.17
TRAF3IP3-213ENST00000478359 IL13P35225 146 aa16.12■□□□□ 0.17
TRAF3IP3-213ENST00000478359 TRIM35Q9UPQ4 493 aa16.12■□□□□ 0.17
TRAF3IP3-213ENST00000478359 USP31Q70CQ4 1352 aa16.11■□□□□ 0.17
TRAF3IP3-213ENST00000478359 CHD2O14647 1828 aaKnown RBP16.11■□□□□ 0.17
TRAF3IP3-213ENST00000478359 EMILIN1Q9Y6C2 1016 aa16.11■□□□□ 0.17
TRAF3IP3-213ENST00000478359 LMOD3Q0VAK6 560 aa16.1■□□□□ 0.17
TRAF3IP3-213ENST00000478359 FMN2Q9NZ56 1722 aa16.1■□□□□ 0.17
TRAF3IP3-213ENST00000478359 PRKAR2BP31323 418 aa16.1■□□□□ 0.17
TRAF3IP3-213ENST00000478359 ZNF428Q96B54 188 aa16.09■□□□□ 0.17
TRAF3IP3-213ENST00000478359 NFE2L2Q16236 605 aa16.08■□□□□ 0.17
TRAF3IP3-213ENST00000478359 NGDNQ8NEJ9 315 aaKnown RBP16.08■□□□□ 0.16
TRAF3IP3-213ENST00000478359 KDM2BQ8NHM5 1336 aa16.07■□□□□ 0.16
TRAF3IP3-213ENST00000478359 KCNA6P17658 529 aa16.07■□□□□ 0.16
TRAF3IP3-213ENST00000478359 ZRANB1Q9UGI0 708 aa16.06■□□□□ 0.16
TRAF3IP3-213ENST00000478359 USP54Q70EL1 1684 aa16.06■□□□□ 0.16
TRAF3IP3-213ENST00000478359 KIF24Q5T7B8 1368 aa16.05■□□□□ 0.16
TRAF3IP3-213ENST00000478359 RGPD8O14715 1765 aaPredicted RBP16.05■□□□□ 0.16
TRAF3IP3-213ENST00000478359 RRS1Q15050 365 aaKnown RBP16.05■□□□□ 0.16
TRAF3IP3-213ENST00000478359 NUTM2FA1L443 756 aa16.04■□□□□ 0.16
TRAF3IP3-213ENST00000478359 FBLN1P23142 703 aa16.04■□□□□ 0.16
TRAF3IP3-213ENST00000478359 FRAT1Q92837 279 aaPredicted RBP16.03■□□□□ 0.16
TRAF3IP3-213ENST00000478359 HMOX1P09601 288 aa16.03■□□□□ 0.16
TRAF3IP3-213ENST00000478359 GNAI1P63096 354 aa16.03■□□□□ 0.16
TRAF3IP3-213ENST00000478359 ALDH1L2Q3SY69 923 aa16.03■□□□□ 0.16
TRAF3IP3-213ENST00000478359 ZKSCAN2Q63HK3 967 aa16.03■□□□□ 0.16
TRAF3IP3-213ENST00000478359 CLUAP1Q96AJ1 413 aa16.03■□□□□ 0.16
TRAF3IP3-213ENST00000478359 EXOSC9Q06265 439 aaKnown RBP16.02■□□□□ 0.16
TRAF3IP3-213ENST00000478359 NPHP4O75161 1426 aaPredicted RBP16.02■□□□□ 0.16
TRAF3IP3-213ENST00000478359 KIF16BQ96L93 1317 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms