RNA–Protein interactions for RNA: ENST00000478303.5

CCDC144A-213, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 5

Gene CCDC144A, Length 935 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-213ENST00000478303 BRD4O60885 1362 aaPredicted RBP24.22■■□□□ 1.47
CCDC144A-213ENST00000478303 USP6P35125 1406 aa24.21■■□□□ 1.47
CCDC144A-213ENST00000478303 PHRF1Q9P1Y6 1649 aaKnown RBP24.2■■□□□ 1.46
CCDC144A-213ENST00000478303 NINLQ9Y2I6 1382 aa24.19■■□□□ 1.46
CCDC144A-213ENST00000478303 CDCA8Q53HL2 280 aa24.19■■□□□ 1.46
CCDC144A-213ENST00000478303 ZNF692Q9BU19 519 aaPredicted RBP24.19■■□□□ 1.46
CCDC144A-213ENST00000478303 TMC1Q8TDI8 760 aa24.18■■□□□ 1.46
CCDC144A-213ENST00000478303 CPSF1Q10570 1443 aaKnown RBP24.18■■□□□ 1.46
CCDC144A-213ENST00000478303 ADAMTS2O95450 1211 aa24.17■■□□□ 1.46
CCDC144A-213ENST00000478303 HSPA5P11021 654 aaKnown RBP24.17■■□□□ 1.46
CCDC144A-213ENST00000478303 HAP1P54257 671 aaPredicted RBP24.17■■□□□ 1.46
CCDC144A-213ENST00000478303 PIK3C2AO00443 1686 aa24.16■■□□□ 1.46
CCDC144A-213ENST00000478303 MYOM1P52179 1685 aa24.16■■□□□ 1.46
CCDC144A-213ENST00000478303 KTN1Q86UP2 1357 aaKnown RBP24.16■■□□□ 1.46
CCDC144A-213ENST00000478303 CD163L1Q9NR16 1453 aa24.14■■□□□ 1.46
CCDC144A-213ENST00000478303 HDGFL2Q7Z4V5 671 aaPredicted RBP24.14■■□□□ 1.45
CCDC144A-213ENST00000478303 C8orf37Q96NL8 207 aa24.14■■□□□ 1.45
CCDC144A-213ENST00000478303 PLEKHG5O94827 1062 aa24.13■■□□□ 1.45
CCDC144A-213ENST00000478303 ABTB2Q8N961 1025 aa24.13■■□□□ 1.45
CCDC144A-213ENST00000478303 SLC12A5Q9H2X9 1139 aa24.13■■□□□ 1.45
CCDC144A-213ENST00000478303 PLCH1Q4KWH8 1693 aa24.12■■□□□ 1.45
CCDC144A-213ENST00000478303 SSH2Q76I76 1423 aa24.12■■□□□ 1.45
CCDC144A-213ENST00000478303 CABLES1Q8TDN4 633 aa24.12■■□□□ 1.45
CCDC144A-213ENST00000478303 TERF2IPQ9NYB0 399 aa24.12■■□□□ 1.45
CCDC144A-213ENST00000478303 AFF2P51816 1311 aa24.1■■□□□ 1.45
CCDC144A-213ENST00000478303 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.1■■□□□ 1.45
CCDC144A-213ENST00000478303 NWD2Q9ULI1 1742 aa24.1■■□□□ 1.45
CCDC144A-213ENST00000478303 NGLY1Q96IV0 654 aa24.1■■□□□ 1.45
CCDC144A-213ENST00000478303 RGS17Q9UGC6 210 aaPredicted RBP24.1■■□□□ 1.45
CCDC144A-213ENST00000478303 A0A1W2PP64 1363 aa24.1■■□□□ 1.45
CCDC144A-213ENST00000478303 TTC21AQ8NDW8 1320 aa24.1■■□□□ 1.45
CCDC144A-213ENST00000478303 ZNF772Q68DY9 489 aaPredicted RBP24.09■■□□□ 1.45
CCDC144A-213ENST00000478303 TTC21BQ7Z4L5 1316 aa24.09■■□□□ 1.45
CCDC144A-213ENST00000478303 COL14A1Q05707 1796 aaKnown RBP24.08■■□□□ 1.45
CCDC144A-213ENST00000478303 USP54Q70EL1 1684 aa24.08■■□□□ 1.45
CCDC144A-213ENST00000478303 NUTM2GQ5VZR2 741 aa24.08■■□□□ 1.45
CCDC144A-213ENST00000478303 NLRP13Q86W25 1043 aa24.08■■□□□ 1.45
CCDC144A-213ENST00000478303 EDC4Q6P2E9 1401 aaKnown RBP24.08■■□□□ 1.44
CCDC144A-213ENST00000478303 ANKRD36BQ8N2N9 1353 aa24.06■■□□□ 1.44
CCDC144A-213ENST00000478303 NLRP6P59044 892 aa24.04■■□□□ 1.44
CCDC144A-213ENST00000478303 KIF20BQ96Q89 1820 aa24.04■■□□□ 1.44
CCDC144A-213ENST00000478303 USP19O94966 1318 aa24.04■■□□□ 1.44
CCDC144A-213ENST00000478303 SLIT3O75094 1523 aa24.04■■□□□ 1.44
CCDC144A-213ENST00000478303 SLIT2O94813 1529 aa24.02■■□□□ 1.44
CCDC144A-213ENST00000478303 FNBP4Q8N3X1 1017 aaPredicted RBP24.02■■□□□ 1.44
CCDC144A-213ENST00000478303 POLR3GLQ9BT43 218 aa24.02■■□□□ 1.44
CCDC144A-213ENST00000478303 POTEAQ6S8J7 498 aa24.01■■□□□ 1.43
CCDC144A-213ENST00000478303 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.01■■□□□ 1.43
CCDC144A-213ENST00000478303 USP21Q9UK80 565 aa24.01■■□□□ 1.43
CCDC144A-213ENST00000478303 NRAPQ86VF7 1730 aa24.01■■□□□ 1.43
CCDC144A-213ENST00000478303 BCL9LQ86UU0 1499 aa23.98■■□□□ 1.43
CCDC144A-213ENST00000478303 LTN1O94822 1766 aa23.97■■□□□ 1.43
CCDC144A-213ENST00000478303 GCP02774 474 aa23.97■■□□□ 1.43
CCDC144A-213ENST00000478303 USP31Q70CQ4 1352 aa23.97■■□□□ 1.43
CCDC144A-213ENST00000478303 KIAA0232Q92628 1395 aa23.97■■□□□ 1.43
CCDC144A-213ENST00000478303 PRDM11Q9NQV5 511 aa23.97■■□□□ 1.43
CCDC144A-213ENST00000478303 FAM83GA6ND36 823 aa23.96■■□□□ 1.43
CCDC144A-213ENST00000478303 ZC3H6P61129 1189 aaKnown RBP23.96■■□□□ 1.43
CCDC144A-213ENST00000478303 ILDR2Q71H61 639 aa23.96■■□□□ 1.43
CCDC144A-213ENST00000478303 CPDO75976 1380 aa23.95■■□□□ 1.42
CCDC144A-213ENST00000478303 NME9Q86XW9 330 aa23.95■■□□□ 1.42
CCDC144A-213ENST00000478303 QTRT2Q9H974 415 aaKnown RBP23.95■■□□□ 1.42
CCDC144A-213ENST00000478303 TRPC5Q9UL62 973 aaPredicted RBP23.95■■□□□ 1.42
CCDC144A-213ENST00000478303 ATRNO75882 1429 aa23.94■■□□□ 1.42
CCDC144A-213ENST00000478303 KCNH5Q8NCM2 988 aa23.94■■□□□ 1.42
CCDC144A-213ENST00000478303 LMO7Q8WWI1 1683 aa23.94■■□□□ 1.42
CCDC144A-213ENST00000478303 UNC5CLQ8IV45 518 aa23.93■■□□□ 1.42
CCDC144A-213ENST00000478303 NFAT5O94916 1531 aa23.93■■□□□ 1.42
CCDC144A-213ENST00000478303 OVOS2A0A0J9YW53 1432 aa23.93■■□□□ 1.42
CCDC144A-213ENST00000478303 OVOS2Q6IE36 1432 aa23.93■■□□□ 1.42
CCDC144A-213ENST00000478303 C11orf95C9JLR9 678 aaPredicted RBP23.92■■□□□ 1.42
CCDC144A-213ENST00000478303 RGPD5Q99666 1765 aa23.92■■□□□ 1.42
CCDC144A-213ENST00000478303 RXRBP28702 533 aa23.91■■□□□ 1.42
CCDC144A-213ENST00000478303 BTG4Q9NY30 223 aa23.91■■□□□ 1.42
CCDC144A-213ENST00000478303 NSD3Q9BZ95 1437 aa23.91■■□□□ 1.42
CCDC144A-213ENST00000478303 COL18A1P39060 1754 aa23.91■■□□□ 1.42
CCDC144A-213ENST00000478303 ANKRD26Q9UPS8 1709 aa23.9■■□□□ 1.42
CCDC144A-213ENST00000478303 CHRNA2Q15822 529 aa23.9■■□□□ 1.42
CCDC144A-213ENST00000478303 ZRANB1Q9UGI0 708 aa23.9■■□□□ 1.42
CCDC144A-213ENST00000478303 KIF7Q2M1P5 1343 aa23.89■■□□□ 1.42
CCDC144A-213ENST00000478303 RBM6P78332 1123 aaKnown RBP23.89■■□□□ 1.41
CCDC144A-213ENST00000478303 SOX12O15370 315 aa23.88■■□□□ 1.41
CCDC144A-213ENST00000478303 COG3Q96JB2 828 aa23.88■■□□□ 1.41
CCDC144A-213ENST00000478303 CDK12Q9NYV4 1490 aaPredicted RBP23.87■■□□□ 1.41
CCDC144A-213ENST00000478303 ZEB1P37275 1124 aaPredicted RBP23.87■■□□□ 1.41
CCDC144A-213ENST00000478303 ABCC6O95255 1503 aa23.87■■□□□ 1.41
CCDC144A-213ENST00000478303 GLI3P10071 1580 aa23.86■■□□□ 1.41
CCDC144A-213ENST00000478303 CAMTA1Q9Y6Y1 1673 aa23.86■■□□□ 1.41
CCDC144A-213ENST00000478303 ZBTB7CA1YPR0 619 aa23.86■■□□□ 1.41
CCDC144A-213ENST00000478303 CARD14Q9BXL6 1004 aa23.85■■□□□ 1.41
CCDC144A-213ENST00000478303 AATKQ6ZMQ8 1374 aa23.84■■□□□ 1.41
CCDC144A-213ENST00000478303 FYB1O15117 783 aa23.84■■□□□ 1.41
CCDC144A-213ENST00000478303 VPS72Q15906 364 aa23.84■■□□□ 1.41
CCDC144A-213ENST00000478303 GJD4Q96KN9 370 aaPredicted RBP23.84■■□□□ 1.41
CCDC144A-213ENST00000478303 ARHGEF25Q86VW2 580 aa23.83■■□□□ 1.41
CCDC144A-213ENST00000478303 GGNBP2Q9H3C7 697 aa23.83■■□□□ 1.41
CCDC144A-213ENST00000478303 CCDC9Q9Y3X0 531 aaKnown RBP23.83■■□□□ 1.41
CCDC144A-213ENST00000478303 CGNL1Q0VF96 1302 aa23.83■■□□□ 1.4
CCDC144A-213ENST00000478303 CCDC7Q96M83 1385 aa23.82■■□□□ 1.4
CCDC144A-213ENST00000478303 PANK3Q9H999 370 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms