RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 FDX1P10109 184 aa10.12□□□□□ -0.79
NCKAP1-204ENST00000477988 FAM217BQ9NTX9 383 aaPredicted RBP10.12□□□□□ -0.79
NCKAP1-204ENST00000477988 MAN1A2O60476 641 aa10.11□□□□□ -0.79
NCKAP1-204ENST00000477988 C6orf229H3BNL8 230 aa10.1□□□□□ -0.79
NCKAP1-204ENST00000477988 KRT76Q01546 638 aa10.1□□□□□ -0.79
NCKAP1-204ENST00000477988 NUTM1Q86Y26 1132 aa10.1□□□□□ -0.79
NCKAP1-204ENST00000477988 CDK15Q96Q40 435 aa10.1□□□□□ -0.79
NCKAP1-204ENST00000477988 GPCPD1Q9NPB8 672 aa10.1□□□□□ -0.79
NCKAP1-204ENST00000477988 ADAMTS8Q9UP79 889 aa10.09□□□□□ -0.79
NCKAP1-204ENST00000477988 RNF225M0QZC1 329 aaPredicted RBP10.08□□□□□ -0.8
NCKAP1-204ENST00000477988 ZFAND3Q9H8U3 227 aa10.08□□□□□ -0.8
NCKAP1-204ENST00000477988 MINK1Q8N4C8 1332 aaPredicted RBP10.07□□□□□ -0.8
NCKAP1-204ENST00000477988 ZIC2O95409 532 aaPredicted RBP10.07□□□□□ -0.8
NCKAP1-204ENST00000477988 FAM174AQ8TBP5 190 aa10.07□□□□□ -0.8
NCKAP1-204ENST00000477988 ITPKCQ96DU7 683 aa10.07□□□□□ -0.8
NCKAP1-204ENST00000477988 CLCN1P35523 988 aa10.06□□□□□ -0.8
NCKAP1-204ENST00000477988 C6orf118Q5T5N4 469 aa10.06□□□□□ -0.8
NCKAP1-204ENST00000477988 DESI1Q6ICB0 168 aa10.06□□□□□ -0.8
NCKAP1-204ENST00000477988 GPR161Q8N6U8 529 aaKnown RBP10.06□□□□□ -0.8
NCKAP1-204ENST00000477988 PRR7Q8TB68 274 aa10.04□□□□□ -0.8
NCKAP1-204ENST00000477988 SOS2Q07890 1332 aaPredicted RBP10.04□□□□□ -0.8
NCKAP1-204ENST00000477988 NR3C2P08235 984 aa10.03□□□□□ -0.8
NCKAP1-204ENST00000477988 NR5A1Q13285 461 aa10.03□□□□□ -0.8
NCKAP1-204ENST00000477988 CCDC102AQ96A19 550 aa10.03□□□□□ -0.8
NCKAP1-204ENST00000477988 CNTNAP3BQ96NU0 1288 aa10.03□□□□□ -0.8
NCKAP1-204ENST00000477988 CNTNAP3Q9BZ76 1288 aa10.03□□□□□ -0.8
NCKAP1-204ENST00000477988 DNMT3LQ9UJW3 386 aa10.03□□□□□ -0.8
NCKAP1-204ENST00000477988 TULP1O00294 542 aaPredicted RBP10.02□□□□□ -0.81
NCKAP1-204ENST00000477988 LINC00528Q8N1L1 170 aa10.02□□□□□ -0.81
NCKAP1-204ENST00000477988 BMP2P12643 396 aa10.01□□□□□ -0.81
NCKAP1-204ENST00000477988 GRM5P41594 1212 aa10.01□□□□□ -0.81
NCKAP1-204ENST00000477988 MEIOBQ8N635 442 aa10.01□□□□□ -0.81
NCKAP1-204ENST00000477988 SPIRE2Q8WWL2 714 aa10.01□□□□□ -0.81
NCKAP1-204ENST00000477988 ZNF385CQ66K41 422 aaPredicted RBP10□□□□□ -0.81
NCKAP1-204ENST00000477988 FOXJ1Q92949 421 aa10□□□□□ -0.81
NCKAP1-204ENST00000477988 DNMT3AQ9Y6K1 912 aaPredicted RBP10□□□□□ -0.81
NCKAP1-204ENST00000477988 SPDYE5A6NIY4 337 aa9.99□□□□□ -0.81
NCKAP1-204ENST00000477988 IGHA1P01876 353 aa9.99□□□□□ -0.81
NCKAP1-204ENST00000477988 NDUFV2P19404 249 aa9.99□□□□□ -0.81
NCKAP1-204ENST00000477988 MOXD2PA6NHM9 499 aa9.98□□□□□ -0.81
NCKAP1-204ENST00000477988 UPP2O95045 317 aa9.98□□□□□ -0.81
NCKAP1-204ENST00000477988 MTMR2Q13614 643 aa9.98□□□□□ -0.81
NCKAP1-204ENST00000477988 ARID5BQ14865 1188 aa9.98□□□□□ -0.81
NCKAP1-204ENST00000477988 NANOS1Q8WY41 292 aaKnown RBP9.98□□□□□ -0.81
NCKAP1-204ENST00000477988 LYPD8Q6UX82 237 aa9.97□□□□□ -0.81
NCKAP1-204ENST00000477988 COL25A1Q9BXS0 654 aaPredicted RBP9.97□□□□□ -0.81
NCKAP1-204ENST00000477988 SPTLC1O15269 473 aa9.96□□□□□ -0.82
NCKAP1-204ENST00000477988 C4orf48Q5BLP8 95 aa9.96□□□□□ -0.82
NCKAP1-204ENST00000477988 GPAT2Q6NUI2 795 aa9.96□□□□□ -0.82
NCKAP1-204ENST00000477988 ARHGEF15O94989 841 aa9.95□□□□□ -0.82
NCKAP1-204ENST00000477988 CTHP32929 405 aa9.95□□□□□ -0.82
NCKAP1-204ENST00000477988 HAP1P54257 671 aaPredicted RBP9.95□□□□□ -0.82
NCKAP1-204ENST00000477988 F12P00748 615 aaPredicted RBP9.94□□□□□ -0.82
NCKAP1-204ENST00000477988 SLURP2P0DP57 97 aa9.94□□□□□ -0.82
NCKAP1-204ENST00000477988 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.94□□□□□ -0.82
NCKAP1-204ENST00000477988 RNFT1Q5M7Z0 435 aa9.94□□□□□ -0.82
NCKAP1-204ENST00000477988 KDM2AQ9Y2K7 1162 aa9.94□□□□□ -0.82
NCKAP1-204ENST00000477988 SSTR3P32745 418 aaPredicted RBP9.93□□□□□ -0.82
NCKAP1-204ENST00000477988 IRS1P35568 1242 aa9.93□□□□□ -0.82
NCKAP1-204ENST00000477988 FOXK2Q01167 660 aa9.93□□□□□ -0.82
NCKAP1-204ENST00000477988 PTSQ03393 145 aa9.93□□□□□ -0.82
NCKAP1-204ENST00000477988 SVOPQ8N4V2 548 aa9.93□□□□□ -0.82
NCKAP1-204ENST00000477988 WHAMMQ8TF30 809 aa9.93□□□□□ -0.82
NCKAP1-204ENST00000477988 KRI1Q8N9T8 703 aaKnown RBP9.92□□□□□ -0.82
NCKAP1-204ENST00000477988 TSEN34Q9BSV6 310 aaKnown RBP9.92□□□□□ -0.82
NCKAP1-204ENST00000477988 KANK3Q6NY19 840 aa9.91□□□□□ -0.82
NCKAP1-204ENST00000477988 MAP10Q9P2G4 905 aa9.91□□□□□ -0.82
NCKAP1-204ENST00000477988 TTLL8A6PVC2 850 aa9.9□□□□□ -0.82
NCKAP1-204ENST00000477988 XP32Q5T750 250 aa9.9□□□□□ -0.82
NCKAP1-204ENST00000477988 GJA5P36382 358 aa9.89□□□□□ -0.83
NCKAP1-204ENST00000477988 BPHLQ86WA6 291 aaPredicted RBP9.89□□□□□ -0.83
NCKAP1-204ENST00000477988 C1QTNF2Q9BXJ5 285 aa9.89□□□□□ -0.83
NCKAP1-204ENST00000477988 CFAP99D6REC4 459 aa9.88□□□□□ -0.83
NCKAP1-204ENST00000477988 CCDC155Q8N6L0 562 aa9.88□□□□□ -0.83
NCKAP1-204ENST00000477988 AGERQ15109 404 aa9.87□□□□□ -0.83
NCKAP1-204ENST00000477988 MAP4K5Q9Y4K4 846 aa9.87□□□□□ -0.83
NCKAP1-204ENST00000477988 SLC35F4A4IF30 521 aa9.86□□□□□ -0.83
NCKAP1-204ENST00000477988 EMILIN1Q9Y6C2 1016 aa9.86□□□□□ -0.83
NCKAP1-204ENST00000477988 FSHRP23945 695 aa9.85□□□□□ -0.83
NCKAP1-204ENST00000477988 MARSP56192 900 aaKnown RBP9.85□□□□□ -0.83
NCKAP1-204ENST00000477988 SH3RF1Q7Z6J0 888 aa9.85□□□□□ -0.83
NCKAP1-204ENST00000477988 SCARF2Q96GP6 870 aaPredicted RBP9.85□□□□□ -0.83
NCKAP1-204ENST00000477988 FIGNL2A6NMB9 653 aa9.84□□□□□ -0.83
NCKAP1-204ENST00000477988 VSIG10Q8N0Z9 540 aa9.84□□□□□ -0.83
NCKAP1-204ENST00000477988 ITGA6P23229 1130 aa9.83□□□□□ -0.84
NCKAP1-204ENST00000477988 RSBN1LQ6PCB5 846 aaPredicted RBP9.83□□□□□ -0.84
NCKAP1-204ENST00000477988 TRMT44Q8IYL2 757 aaKnown RBP9.83□□□□□ -0.84
NCKAP1-204ENST00000477988 PCDHB15Q9Y5E8 787 aa9.83□□□□□ -0.84
NCKAP1-204ENST00000477988 SPINT1O43278 529 aa9.82□□□□□ -0.84
NCKAP1-204ENST00000477988 CCDC116Q8IYX3 515 aa9.82□□□□□ -0.84
NCKAP1-204ENST00000477988 VWA5B2Q8N398 1253 aa9.82□□□□□ -0.84
NCKAP1-204ENST00000477988 HRCP23327 699 aa9.81□□□□□ -0.84
NCKAP1-204ENST00000477988 Q6ZVU0 165 aa9.81□□□□□ -0.84
NCKAP1-204ENST00000477988 SV2AQ7L0J3 742 aa9.81□□□□□ -0.84
NCKAP1-204ENST00000477988 VASH1Q7L8A9 365 aaPredicted RBP9.81□□□□□ -0.84
NCKAP1-204ENST00000477988 PER1O15534 1290 aaPredicted RBP9.8□□□□□ -0.84
NCKAP1-204ENST00000477988 ADAM23O75077 832 aa9.8□□□□□ -0.84
NCKAP1-204ENST00000477988 LYPD4Q6UWN0 246 aa9.79□□□□□ -0.84
NCKAP1-204ENST00000477988 TBC1D2Q9BYX2 928 aa9.79□□□□□ -0.84
NCKAP1-204ENST00000477988 ZBTB3Q9H5J0 574 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms