RNA–Protein interactions for RNA: ENST00000477563.6

RBBP4-211, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 5

Gene RBBP4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-211ENST00000477563 ALS2Q96Q42 1657 aa11.46□□□□□ -0.58
RBBP4-211ENST00000477563 DLC1Q96QB1 1528 aa11.45□□□□□ -0.58
RBBP4-211ENST00000477563 ANKARQ7Z5J8 1434 aa11.45□□□□□ -0.58
RBBP4-211ENST00000477563 SF3B2Q13435 895 aaKnown RBP11.45□□□□□ -0.58
RBBP4-211ENST00000477563 KRT27Q7Z3Y8 459 aa11.45□□□□□ -0.58
RBBP4-211ENST00000477563 COL14A1Q05707 1796 aaKnown RBP11.45□□□□□ -0.58
RBBP4-211ENST00000477563 RGPD1P0DJD0 1748 aa11.45□□□□□ -0.58
RBBP4-211ENST00000477563 CRYBG1Q9Y4K1 1723 aa11.45□□□□□ -0.58
RBBP4-211ENST00000477563 FAM83GA6ND36 823 aa11.44□□□□□ -0.58
RBBP4-211ENST00000477563 RGL3Q3MIN7 710 aa11.44□□□□□ -0.58
RBBP4-211ENST00000477563 DHX57Q6P158 1386 aaKnown RBP11.43□□□□□ -0.58
RBBP4-211ENST00000477563 CABLES1Q8TDN4 633 aa11.43□□□□□ -0.58
RBBP4-211ENST00000477563 MPHOSPH9Q99550 1183 aa11.43□□□□□ -0.58
RBBP4-211ENST00000477563 THSD7AQ9UPZ6 1657 aa11.43□□□□□ -0.58
RBBP4-211ENST00000477563 TNS1Q9HBL0 1735 aaKnown RBP11.42□□□□□ -0.58
RBBP4-211ENST00000477563 DISP2A7MBM2 1401 aa11.42□□□□□ -0.58
RBBP4-211ENST00000477563 ACIN1Q9UKV3 1341 aaKnown RBP11.41□□□□□ -0.58
RBBP4-211ENST00000477563 BAG6P46379 1132 aa11.41□□□□□ -0.58
RBBP4-211ENST00000477563 HAP1P54257 671 aaPredicted RBP11.41□□□□□ -0.58
RBBP4-211ENST00000477563 MKRN4PQ13434 485 aaPredicted RBP11.41□□□□□ -0.58
RBBP4-211ENST00000477563 HRCP23327 699 aa11.4□□□□□ -0.58
RBBP4-211ENST00000477563 CFAP70Q5T0N1 1121 aa11.4□□□□□ -0.58
RBBP4-211ENST00000477563 ADGRB1O14514 1584 aa11.4□□□□□ -0.58
RBBP4-211ENST00000477563 PRAM1Q96QH2 718 aa11.39□□□□□ -0.59
RBBP4-211ENST00000477563 BTG4Q9NY30 223 aa11.38□□□□□ -0.59
RBBP4-211ENST00000477563 CCDC9Q9Y3X0 531 aaKnown RBP11.38□□□□□ -0.59
RBBP4-211ENST00000477563 TULP4Q9NRJ4 1543 aa11.38□□□□□ -0.59
RBBP4-211ENST00000477563 SPATA31A5Q5VU36 1347 aa11.37□□□□□ -0.59
RBBP4-211ENST00000477563 SPATA31A7Q8IWB4 1347 aa11.37□□□□□ -0.59
RBBP4-211ENST00000477563 FAM98CQ17RN3 349 aaKnown RBP11.37□□□□□ -0.59
RBBP4-211ENST00000477563 CHRDL2Q6WN34 429 aa11.37□□□□□ -0.59
RBBP4-211ENST00000477563 EIF3AQ14152 1382 aaKnown RBP11.37□□□□□ -0.59
RBBP4-211ENST00000477563 ITSN1Q15811 1721 aa11.36□□□□□ -0.59
RBBP4-211ENST00000477563 REM2Q8IYK8 340 aaPredicted RBP11.36□□□□□ -0.59
RBBP4-211ENST00000477563 PMFBP1Q8TBY8 1022 aa11.36□□□□□ -0.59
RBBP4-211ENST00000477563 PHRF1Q9P1Y6 1649 aaKnown RBP11.35□□□□□ -0.59
RBBP4-211ENST00000477563 PSDA5PKW4 1024 aaPredicted RBP11.35□□□□□ -0.59
RBBP4-211ENST00000477563 SPDYE2BA6NHP3 402 aa11.35□□□□□ -0.59
RBBP4-211ENST00000477563 SPDYE6P0CI01 402 aa11.35□□□□□ -0.59
RBBP4-211ENST00000477563 SPDYE2Q495Y8 402 aa11.35□□□□□ -0.59
RBBP4-211ENST00000477563 LMOD2Q6P5Q4 547 aa11.35□□□□□ -0.59
RBBP4-211ENST00000477563 GPRASP1Q5JY77 1395 aa11.35□□□□□ -0.59
RBBP4-211ENST00000477563 RREB1Q92766 1687 aa11.35□□□□□ -0.59
RBBP4-211ENST00000477563 PRR36Q9H6K5 1346 aa11.35□□□□□ -0.59
RBBP4-211ENST00000477563 EN1Q05925 392 aaPredicted RBP11.34□□□□□ -0.59
RBBP4-211ENST00000477563 POGKQ9P215 609 aa11.34□□□□□ -0.59
RBBP4-211ENST00000477563 PARD3Q8TEW0 1356 aa11.33□□□□□ -0.6
RBBP4-211ENST00000477563 WASLO00401 505 aaPredicted RBP11.33□□□□□ -0.6
RBBP4-211ENST00000477563 SAFB2Q14151 953 aaKnown RBP eCLIP11.33□□□□□ -0.6
RBBP4-211ENST00000477563 CAMKK2Q96RR4 588 aa11.33□□□□□ -0.6
RBBP4-211ENST00000477563 SPATA31A1Q5TZJ5 1347 aa11.33□□□□□ -0.6
RBBP4-211ENST00000477563 ARHGEF28Q8N1W1 1705 aaKnown RBP11.32□□□□□ -0.6
RBBP4-211ENST00000477563 A0A0G2JS52 829 aa11.32□□□□□ -0.6
RBBP4-211ENST00000477563 MYT1Q01538 1121 aa11.32□□□□□ -0.6
RBBP4-211ENST00000477563 STAC3Q96MF2 364 aa11.32□□□□□ -0.6
RBBP4-211ENST00000477563 ATP7BP35670 1465 aa11.32□□□□□ -0.6
RBBP4-211ENST00000477563 EZH2Q15910 746 aaKnown RBP11.31□□□□□ -0.6
RBBP4-211ENST00000477563 FAM196AQ6ZSG2 479 aa11.31□□□□□ -0.6
RBBP4-211ENST00000477563 NUP188Q5SRE5 1749 aa11.31□□□□□ -0.6
RBBP4-211ENST00000477563 TOPAZ1Q8N9V7 1692 aa11.3□□□□□ -0.6
RBBP4-211ENST00000477563 PLEKHG5O94827 1062 aa11.3□□□□□ -0.6
RBBP4-211ENST00000477563 R3HDM1Q15032 1099 aaKnown RBP11.3□□□□□ -0.6
RBBP4-211ENST00000477563 FAM182BQ5T319 152 aa11.3□□□□□ -0.6
RBBP4-211ENST00000477563 TRAK1Q9UPV9 953 aa11.3□□□□□ -0.6
RBBP4-211ENST00000477563 LMO7Q8WWI1 1683 aa11.3□□□□□ -0.6
RBBP4-211ENST00000477563 KIAA0232Q92628 1395 aa11.29□□□□□ -0.6
RBBP4-211ENST00000477563 BARGINQ6ZT62 677 aa11.29□□□□□ -0.6
RBBP4-211ENST00000477563 HIRIP3Q9BW71 556 aaPredicted RBP11.29□□□□□ -0.6
RBBP4-211ENST00000477563 PRDM11Q9NQV5 511 aa11.29□□□□□ -0.6
RBBP4-211ENST00000477563 MINK1Q8N4C8 1332 aaPredicted RBP11.29□□□□□ -0.6
RBBP4-211ENST00000477563 POLR3AO14802 1390 aaPredicted RBP11.28□□□□□ -0.6
RBBP4-211ENST00000477563 RGPD3A6NKT7 1758 aaPredicted RBP11.28□□□□□ -0.6
RBBP4-211ENST00000477563 RGPD4Q7Z3J3 1758 aa11.28□□□□□ -0.6
RBBP4-211ENST00000477563 NGDNQ8NEJ9 315 aaKnown RBP11.28□□□□□ -0.6
RBBP4-211ENST00000477563 PARP4Q9UKK3 1724 aaKnown RBP11.28□□□□□ -0.6
RBBP4-211ENST00000477563 NRKQ7Z2Y5 1582 aa11.28□□□□□ -0.6
RBBP4-211ENST00000477563 TRIM37O94972 964 aa11.27□□□□□ -0.61
RBBP4-211ENST00000477563 CPDO75976 1380 aa11.27□□□□□ -0.61
RBBP4-211ENST00000477563 CAMTA1Q9Y6Y1 1673 aa11.27□□□□□ -0.61
RBBP4-211ENST00000477563 PAK3O75914 559 aaPredicted RBP11.26□□□□□ -0.61
RBBP4-211ENST00000477563 NUDT16Q96DE0 195 aaKnown RBP11.26□□□□□ -0.61
RBBP4-211ENST00000477563 KIAA1210Q9ULL0 1709 aa11.26□□□□□ -0.61
RBBP4-211ENST00000477563 SSH2Q76I76 1423 aa11.26□□□□□ -0.61
RBBP4-211ENST00000477563 SBF2Q86WG5 1849 aa11.25□□□□□ -0.61
RBBP4-211ENST00000477563 PLEKHG3A1L390 1219 aa11.25□□□□□ -0.61
RBBP4-211ENST00000477563 APBA3O96018 575 aa11.25□□□□□ -0.61
RBBP4-211ENST00000477563 THRAP3Q9Y2W1 955 aaKnown RBP11.25□□□□□ -0.61
RBBP4-211ENST00000477563 PEAK1Q9H792 1746 aa11.25□□□□□ -0.61
RBBP4-211ENST00000477563 C11orf95C9JLR9 678 aaPredicted RBP11.24□□□□□ -0.61
RBBP4-211ENST00000477563 CHRNA2Q15822 529 aa11.24□□□□□ -0.61
RBBP4-211ENST00000477563 DCAF11Q8TEB1 546 aa11.24□□□□□ -0.61
RBBP4-211ENST00000477563 USP19O94966 1318 aa11.24□□□□□ -0.61
RBBP4-211ENST00000477563 UTRNP46939 3433 aa11.23□□□□□ -0.61
RBBP4-211ENST00000477563 PITPNM1O00562 1244 aa11.23□□□□□ -0.61
RBBP4-211ENST00000477563 ZC3H6P61129 1189 aaKnown RBP11.23□□□□□ -0.61
RBBP4-211ENST00000477563 NBPF8Q3BBV2 869 aa11.23□□□□□ -0.61
RBBP4-211ENST00000477563 ZNF692Q9BU19 519 aaPredicted RBP11.23□□□□□ -0.61
RBBP4-211ENST00000477563 STRN4Q9NRL3 753 aa11.23□□□□□ -0.61
RBBP4-211ENST00000477563 ACEP12821 1306 aa11.23□□□□□ -0.61
RBBP4-211ENST00000477563 RAB3GAP2Q9H2M9 1393 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms