RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 USP6P35125 1406 aa23.22■■□□□ 1.31
EPHB4-204ENST00000477446 NRKQ7Z2Y5 1582 aa23.19■■□□□ 1.3
EPHB4-204ENST00000477446 SSH2Q76I76 1423 aa23.19■■□□□ 1.3
EPHB4-204ENST00000477446 PANK3Q9H999 370 aa23.18■■□□□ 1.3
EPHB4-204ENST00000477446 SBNO1A3KN83 1393 aa23.18■■□□□ 1.3
EPHB4-204ENST00000477446 PAK3O75914 559 aaPredicted RBP23.18■■□□□ 1.3
EPHB4-204ENST00000477446 LRRC59Q96AG4 307 aaKnown RBP23.18■■□□□ 1.3
EPHB4-204ENST00000477446 CARD14Q9BXL6 1004 aa23.17■■□□□ 1.3
EPHB4-204ENST00000477446 BRD4O60885 1362 aaPredicted RBP23.17■■□□□ 1.3
EPHB4-204ENST00000477446 SPATA31A3Q5VYP0 1347 aa23.16■■□□□ 1.3
EPHB4-204ENST00000477446 EDC4Q6P2E9 1401 aaKnown RBP23.16■■□□□ 1.3
EPHB4-204ENST00000477446 TTC21BQ7Z4L5 1316 aa23.15■■□□□ 1.3
EPHB4-204ENST00000477446 ALS2Q96Q42 1657 aa23.15■■□□□ 1.3
EPHB4-204ENST00000477446 TNS3Q68CZ2 1445 aa23.15■■□□□ 1.3
EPHB4-204ENST00000477446 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.14■■□□□ 1.29
EPHB4-204ENST00000477446 LMOD2Q6P5Q4 547 aa23.13■■□□□ 1.29
EPHB4-204ENST00000477446 NSD3Q9BZ95 1437 aa23.12■■□□□ 1.29
EPHB4-204ENST00000477446 TTC21AQ8NDW8 1320 aa23.11■■□□□ 1.29
EPHB4-204ENST00000477446 ABTB2Q8N961 1025 aa23.1■■□□□ 1.29
EPHB4-204ENST00000477446 PIK3C2AO00443 1686 aa23.1■■□□□ 1.29
EPHB4-204ENST00000477446 ARHGEF10O15013 1369 aa23.09■■□□□ 1.29
EPHB4-204ENST00000477446 PNPLA6Q8IY17 1366 aa23.09■■□□□ 1.29
EPHB4-204ENST00000477446 DDX10Q13206 875 aaKnown RBP23.09■■□□□ 1.29
EPHB4-204ENST00000477446 SHPRHQ149N8 1683 aa23.08■■□□□ 1.29
EPHB4-204ENST00000477446 JCADQ9P266 1359 aa23.08■■□□□ 1.29
EPHB4-204ENST00000477446 NUTM2GQ5VZR2 741 aa23.08■■□□□ 1.29
EPHB4-204ENST00000477446 NME9Q86XW9 330 aa23.08■■□□□ 1.29
EPHB4-204ENST00000477446 PER1O15534 1290 aaPredicted RBP23.07■■□□□ 1.28
EPHB4-204ENST00000477446 COL22A1Q8NFW1 1626 aaPredicted RBP23.06■■□□□ 1.28
EPHB4-204ENST00000477446 KIF20BQ96Q89 1820 aa23.06■■□□□ 1.28
EPHB4-204ENST00000477446 ZRANB1Q9UGI0 708 aa23.06■■□□□ 1.28
EPHB4-204ENST00000477446 KNSTRNQ9Y448 316 aa23.06■■□□□ 1.28
EPHB4-204ENST00000477446 FYB1O15117 783 aa23.05■■□□□ 1.28
EPHB4-204ENST00000477446 NLRP6P59044 892 aa23.05■■□□□ 1.28
EPHB4-204ENST00000477446 CGNL1Q0VF96 1302 aa23.04■■□□□ 1.28
EPHB4-204ENST00000477446 MARF1Q9Y4F3 1742 aaKnown RBP23.04■■□□□ 1.28
EPHB4-204ENST00000477446 PLEKHG5O94827 1062 aa23.03■■□□□ 1.28
EPHB4-204ENST00000477446 NLRP13Q86W25 1043 aa23.03■■□□□ 1.28
EPHB4-204ENST00000477446 CABLES1Q8TDN4 633 aa23.02■■□□□ 1.28
EPHB4-204ENST00000477446 USP31Q70CQ4 1352 aa23.02■■□□□ 1.28
EPHB4-204ENST00000477446 MED1Q15648 1581 aaPredicted RBP23.02■■□□□ 1.28
EPHB4-204ENST00000477446 CRYBG1Q9Y4K1 1723 aa23.02■■□□□ 1.28
EPHB4-204ENST00000477446 USP54Q70EL1 1684 aa23.02■■□□□ 1.27
EPHB4-204ENST00000477446 GGNBP2Q9H3C7 697 aa23.01■■□□□ 1.27
EPHB4-204ENST00000477446 ABCA3Q99758 1704 aa23■■□□□ 1.27
EPHB4-204ENST00000477446 AMER1Q5JTC6 1135 aaPredicted RBP23■■□□□ 1.27
EPHB4-204ENST00000477446 USP19O94966 1318 aa23■■□□□ 1.27
EPHB4-204ENST00000477446 OVOS2A0A0J9YW53 1432 aa22.99■■□□□ 1.27
EPHB4-204ENST00000477446 OVOS2Q6IE36 1432 aa22.99■■□□□ 1.27
EPHB4-204ENST00000477446 PHRF1Q9P1Y6 1649 aaKnown RBP22.99■■□□□ 1.27
EPHB4-204ENST00000477446 COG3Q96JB2 828 aa22.98■■□□□ 1.27
EPHB4-204ENST00000477446 YTHDC1Q96MU7 727 aaKnown RBP22.98■■□□□ 1.27
EPHB4-204ENST00000477446 SPATA31A6Q5VVP1 1343 aa22.98■■□□□ 1.27
EPHB4-204ENST00000477446 ANKRD26Q9UPS8 1709 aa22.97■■□□□ 1.27
EPHB4-204ENST00000477446 NUTM2BA6NNL0 878 aaPredicted RBP22.97■■□□□ 1.27
EPHB4-204ENST00000477446 NUTM2EB1AL46 878 aaPredicted RBP22.97■■□□□ 1.27
EPHB4-204ENST00000477446 NUTM2AQ8IVF1 878 aaPredicted RBP22.97■■□□□ 1.27
EPHB4-204ENST00000477446 SLIT3O75094 1523 aa22.96■■□□□ 1.27
EPHB4-204ENST00000477446 NSD2O96028 1365 aa22.95■■□□□ 1.27
EPHB4-204ENST00000477446 ANP32CO43423 234 aa22.95■■□□□ 1.26
EPHB4-204ENST00000477446 GCP02774 474 aa22.95■■□□□ 1.26
EPHB4-204ENST00000477446 HAP1P54257 671 aaPredicted RBP22.95■■□□□ 1.26
EPHB4-204ENST00000477446 CCER2I3L3R5 266 aa22.94■■□□□ 1.26
EPHB4-204ENST00000477446 CC2D1BQ5T0F9 858 aaKnown RBP22.93■■□□□ 1.26
EPHB4-204ENST00000477446 NPC1L1Q9UHC9 1359 aa22.93■■□□□ 1.26
EPHB4-204ENST00000477446 SOX12O15370 315 aa22.93■■□□□ 1.26
EPHB4-204ENST00000477446 CNGB1Q14028 1251 aaPredicted RBP22.93■■□□□ 1.26
EPHB4-204ENST00000477446 LRP6O75581 1613 aa22.92■■□□□ 1.26
EPHB4-204ENST00000477446 KCNH5Q8NCM2 988 aa22.91■■□□□ 1.26
EPHB4-204ENST00000477446 NFAT5O94916 1531 aa22.9■■□□□ 1.26
EPHB4-204ENST00000477446 ADAMTS2O95450 1211 aa22.89■■□□□ 1.26
EPHB4-204ENST00000477446 FBLN1P23142 703 aa22.89■■□□□ 1.26
EPHB4-204ENST00000477446 ZC3H6P61129 1189 aaKnown RBP22.89■■□□□ 1.26
EPHB4-204ENST00000477446 MORC1Q86VD1 984 aa22.89■■□□□ 1.26
EPHB4-204ENST00000477446 KIAA0232Q92628 1395 aa22.86■■□□□ 1.25
EPHB4-204ENST00000477446 TNNT2P45379 298 aaPredicted RBP22.86■■□□□ 1.25
EPHB4-204ENST00000477446 CPDO75976 1380 aa22.85■■□□□ 1.25
EPHB4-204ENST00000477446 LTN1O94822 1766 aa22.85■■□□□ 1.25
EPHB4-204ENST00000477446 ARHGEF25Q86VW2 580 aa22.84■■□□□ 1.25
EPHB4-204ENST00000477446 MAP2P11137 1827 aaKnown RBP22.84■■□□□ 1.25
EPHB4-204ENST00000477446 FAM83GA6ND36 823 aa22.84■■□□□ 1.25
EPHB4-204ENST00000477446 MEX3CQ5U5Q3 659 aaKnown RBP22.84■■□□□ 1.25
EPHB4-204ENST00000477446 ZBTB7CA1YPR0 619 aa22.83■■□□□ 1.25
EPHB4-204ENST00000477446 RRS1Q15050 365 aaKnown RBP22.83■■□□□ 1.25
EPHB4-204ENST00000477446 PRDM11Q9NQV5 511 aa22.83■■□□□ 1.25
EPHB4-204ENST00000477446 CHRNA2Q15822 529 aa22.82■■□□□ 1.24
EPHB4-204ENST00000477446 AATKQ6ZMQ8 1374 aa22.82■■□□□ 1.24
EPHB4-204ENST00000477446 C8orf37Q96NL8 207 aa22.81■■□□□ 1.24
EPHB4-204ENST00000477446 MAP3K19Q56UN5 1328 aa22.81■■□□□ 1.24
EPHB4-204ENST00000477446 COL14A1Q05707 1796 aaKnown RBP22.81■■□□□ 1.24
EPHB4-204ENST00000477446 COL18A1P39060 1754 aa22.8■■□□□ 1.24
EPHB4-204ENST00000477446 PARD3Q8TEW0 1356 aa22.79■■□□□ 1.24
EPHB4-204ENST00000477446 NGLY1Q96IV0 654 aa22.79■■□□□ 1.24
EPHB4-204ENST00000477446 POLKQ9UBT6 870 aa22.79■■□□□ 1.24
EPHB4-204ENST00000477446 PLCH1Q4KWH8 1693 aa22.78■■□□□ 1.24
EPHB4-204ENST00000477446 GTF3C3Q9Y5Q9 886 aa22.78■■□□□ 1.24
EPHB4-204ENST00000477446 EMILIN1Q9Y6C2 1016 aa22.78■■□□□ 1.24
EPHB4-204ENST00000477446 LMO7Q8WWI1 1683 aa22.77■■□□□ 1.24
EPHB4-204ENST00000477446 RGPD5Q99666 1765 aa22.77■■□□□ 1.24
EPHB4-204ENST00000477446 PEAK1Q9H792 1746 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms