RNA–Protein interactions for RNA: ENST00000476948.1

PWP2-204, Transcript of PWP2, small subunit processome component, humanhuman

TSL 3

Gene PWP2, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PWP2-204ENST00000476948 CABP1Q9NZU7 370 aa19.12■□□□□ 0.65
PWP2-204ENST00000476948 ALS2Q96Q42 1657 aa19.11■□□□□ 0.65
PWP2-204ENST00000476948 CPSF1Q10570 1443 aaKnown RBP19.11■□□□□ 0.65
PWP2-204ENST00000476948 XPCQ01831 940 aaPredicted RBP19.11■□□□□ 0.65
PWP2-204ENST00000476948 PHF8Q9UPP1 1060 aa19.11■□□□□ 0.65
PWP2-204ENST00000476948 PIK3C2AO00443 1686 aa19.11■□□□□ 0.65
PWP2-204ENST00000476948 CCDC61Q9Y6R9 512 aa19.1■□□□□ 0.65
PWP2-204ENST00000476948 ACEP12821 1306 aa19.09■□□□□ 0.65
PWP2-204ENST00000476948 TOM1O60784 492 aa19.09■□□□□ 0.65
PWP2-204ENST00000476948 TMC1Q8TDI8 760 aa19.09■□□□□ 0.65
PWP2-204ENST00000476948 KIF20BQ96Q89 1820 aa19.09■□□□□ 0.65
PWP2-204ENST00000476948 USP6P35125 1406 aa19.08■□□□□ 0.65
PWP2-204ENST00000476948 CRYBG1Q9Y4K1 1723 aa19.08■□□□□ 0.65
PWP2-204ENST00000476948 PUS7Q96PZ0 661 aaKnown RBP19.08■□□□□ 0.64
PWP2-204ENST00000476948 ABCA3Q99758 1704 aa19.08■□□□□ 0.64
PWP2-204ENST00000476948 PLEKHG3A1L390 1219 aa19.07■□□□□ 0.64
PWP2-204ENST00000476948 SSH2Q76I76 1423 aa19.07■□□□□ 0.64
PWP2-204ENST00000476948 ANKRD36BQ8N2N9 1353 aa19.06■□□□□ 0.64
PWP2-204ENST00000476948 NINLQ9Y2I6 1382 aa19.06■□□□□ 0.64
PWP2-204ENST00000476948 FOXO3O43524 673 aa19.06■□□□□ 0.64
PWP2-204ENST00000476948 ZNF316A6NFI3 1004 aaPredicted RBP19.05■□□□□ 0.64
PWP2-204ENST00000476948 CDCA8Q53HL2 280 aa19.04■□□□□ 0.64
PWP2-204ENST00000476948 NSD3Q9BZ95 1437 aa19.04■□□□□ 0.64
PWP2-204ENST00000476948 USP54Q70EL1 1684 aa19.03■□□□□ 0.64
PWP2-204ENST00000476948 ANKRD26Q9UPS8 1709 aa19.03■□□□□ 0.64
PWP2-204ENST00000476948 SLC24A1O60721 1099 aa19.02■□□□□ 0.64
PWP2-204ENST00000476948 NGDNQ8NEJ9 315 aaKnown RBP19.02■□□□□ 0.64
PWP2-204ENST00000476948 CARD14Q9BXL6 1004 aa19.02■□□□□ 0.64
PWP2-204ENST00000476948 PHRF1Q9P1Y6 1649 aaKnown RBP19.02■□□□□ 0.64
PWP2-204ENST00000476948 KTN1Q86UP2 1357 aaKnown RBP19.02■□□□□ 0.64
PWP2-204ENST00000476948 SOS2Q07890 1332 aaPredicted RBP19.01■□□□□ 0.63
PWP2-204ENST00000476948 ABCB7O75027 752 aa19.01■□□□□ 0.63
PWP2-204ENST00000476948 NPHP3Q7Z494 1330 aa19■□□□□ 0.63
PWP2-204ENST00000476948 TNS3Q68CZ2 1445 aa19■□□□□ 0.63
PWP2-204ENST00000476948 EDC4Q6P2E9 1401 aaKnown RBP19■□□□□ 0.63
PWP2-204ENST00000476948 MED1Q15648 1581 aaPredicted RBP19■□□□□ 0.63
PWP2-204ENST00000476948 SHPRHQ149N8 1683 aa19■□□□□ 0.63
PWP2-204ENST00000476948 COL22A1Q8NFW1 1626 aaPredicted RBP19■□□□□ 0.63
PWP2-204ENST00000476948 PANK3Q9H999 370 aa18.99■□□□□ 0.63
PWP2-204ENST00000476948 HSPA1LP34931 641 aa18.98■□□□□ 0.63
PWP2-204ENST00000476948 KRT28Q7Z3Y7 464 aa18.98■□□□□ 0.63
PWP2-204ENST00000476948 ZRANB1Q9UGI0 708 aa18.97■□□□□ 0.63
PWP2-204ENST00000476948 FBXO41Q8TF61 875 aa18.96■□□□□ 0.63
PWP2-204ENST00000476948 TTC21BQ7Z4L5 1316 aa18.96■□□□□ 0.63
PWP2-204ENST00000476948 SBNO1A3KN83 1393 aa18.95■□□□□ 0.62
PWP2-204ENST00000476948 OVOS2A0A0J9YW53 1432 aa18.95■□□□□ 0.62
PWP2-204ENST00000476948 OVOS2Q6IE36 1432 aa18.95■□□□□ 0.62
PWP2-204ENST00000476948 DDX10Q13206 875 aaKnown RBP18.95■□□□□ 0.62
PWP2-204ENST00000476948 POLA2Q14181 598 aa18.95■□□□□ 0.62
PWP2-204ENST00000476948 HDGFL2Q7Z4V5 671 aaPredicted RBP18.95■□□□□ 0.62
PWP2-204ENST00000476948 NME9Q86XW9 330 aa18.95■□□□□ 0.62
PWP2-204ENST00000476948 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.95■□□□□ 0.62
PWP2-204ENST00000476948 TERF2IPQ9NYB0 399 aa18.95■□□□□ 0.62
PWP2-204ENST00000476948 PNPLA6Q8IY17 1366 aa18.94■□□□□ 0.62
PWP2-204ENST00000476948 PSME1Q06323 249 aa18.94■□□□□ 0.62
PWP2-204ENST00000476948 SPATA31A3Q5VYP0 1347 aa18.94■□□□□ 0.62
PWP2-204ENST00000476948 NUTM2GQ5VZR2 741 aa18.93■□□□□ 0.62
PWP2-204ENST00000476948 SLIT3O75094 1523 aa18.93■□□□□ 0.62
PWP2-204ENST00000476948 PER1O15534 1290 aaPredicted RBP18.92■□□□□ 0.62
PWP2-204ENST00000476948 PAK3O75914 559 aaPredicted RBP18.91■□□□□ 0.62
PWP2-204ENST00000476948 PLEKHG5O94827 1062 aa18.91■□□□□ 0.62
PWP2-204ENST00000476948 LRP6O75581 1613 aa18.91■□□□□ 0.62
PWP2-204ENST00000476948 NFAT5O94916 1531 aa18.9■□□□□ 0.62
PWP2-204ENST00000476948 ZNF692Q9BU19 519 aaPredicted RBP18.89■□□□□ 0.61
PWP2-204ENST00000476948 LTN1O94822 1766 aa18.88■□□□□ 0.61
PWP2-204ENST00000476948 AMER1Q5JTC6 1135 aaPredicted RBP18.88■□□□□ 0.61
PWP2-204ENST00000476948 GGNBP2Q9H3C7 697 aa18.88■□□□□ 0.61
PWP2-204ENST00000476948 TTC21AQ8NDW8 1320 aa18.88■□□□□ 0.61
PWP2-204ENST00000476948 BRD4O60885 1362 aaPredicted RBP18.88■□□□□ 0.61
PWP2-204ENST00000476948 USP19O94966 1318 aa18.87■□□□□ 0.61
PWP2-204ENST00000476948 LMOD2Q6P5Q4 547 aa18.87■□□□□ 0.61
PWP2-204ENST00000476948 CABLES1Q8TDN4 633 aa18.87■□□□□ 0.61
PWP2-204ENST00000476948 PEAK1Q9H792 1746 aa18.87■□□□□ 0.61
PWP2-204ENST00000476948 USP31Q70CQ4 1352 aa18.86■□□□□ 0.61
PWP2-204ENST00000476948 FYB1O15117 783 aa18.86■□□□□ 0.61
PWP2-204ENST00000476948 CNGB1Q14028 1251 aaPredicted RBP18.86■□□□□ 0.61
PWP2-204ENST00000476948 ARHGEF10O15013 1369 aa18.85■□□□□ 0.61
PWP2-204ENST00000476948 JCADQ9P266 1359 aa18.84■□□□□ 0.61
PWP2-204ENST00000476948 ABTB2Q8N961 1025 aa18.84■□□□□ 0.61
PWP2-204ENST00000476948 FBLN1P23142 703 aa18.83■□□□□ 0.6
PWP2-204ENST00000476948 CC2D1BQ5T0F9 858 aaKnown RBP18.83■□□□□ 0.6
PWP2-204ENST00000476948 PLCH1Q4KWH8 1693 aa18.82■□□□□ 0.6
PWP2-204ENST00000476948 CGNL1Q0VF96 1302 aa18.82■□□□□ 0.6
PWP2-204ENST00000476948 ILDR1Q86SU0 546 aaPredicted RBP18.82■□□□□ 0.6
PWP2-204ENST00000476948 LRRC59Q96AG4 307 aaKnown RBP18.82■□□□□ 0.6
PWP2-204ENST00000476948 KNSTRNQ9Y448 316 aa18.82■□□□□ 0.6
PWP2-204ENST00000476948 COL18A1P39060 1754 aa18.82■□□□□ 0.6
PWP2-204ENST00000476948 RGPD5Q99666 1765 aa18.82■□□□□ 0.6
PWP2-204ENST00000476948 MAP2P11137 1827 aaKnown RBP18.81■□□□□ 0.6
PWP2-204ENST00000476948 SOX12O15370 315 aa18.81■□□□□ 0.6
PWP2-204ENST00000476948 NLRP6P59044 892 aa18.81■□□□□ 0.6
PWP2-204ENST00000476948 LMO7Q8WWI1 1683 aa18.81■□□□□ 0.6
PWP2-204ENST00000476948 NSD2O96028 1365 aa18.8■□□□□ 0.6
PWP2-204ENST00000476948 NPC1L1Q9UHC9 1359 aa18.8■□□□□ 0.6
PWP2-204ENST00000476948 NRAPQ86VF7 1730 aa18.78■□□□□ 0.6
PWP2-204ENST00000476948 PARD3Q8TEW0 1356 aa18.77■□□□□ 0.6
PWP2-204ENST00000476948 NUTM2BA6NNL0 878 aaPredicted RBP18.75■□□□□ 0.59
PWP2-204ENST00000476948 NUTM2EB1AL46 878 aaPredicted RBP18.75■□□□□ 0.59
PWP2-204ENST00000476948 TNNT2P45379 298 aaPredicted RBP18.75■□□□□ 0.59
PWP2-204ENST00000476948 NLRP13Q86W25 1043 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms