RNA–Protein interactions for RNA: ENST00000476842.1

SMIM4-202, Transcript of small integral membrane protein 4, humanhuman

TSL 4 BASIC

Gene SMIM4, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-202ENST00000476842 HDGFL2Q7Z4V5 671 aaPredicted RBP24.83■■□□□ 1.57
SMIM4-202ENST00000476842 PHF23Q9BUL5 403 aaPredicted RBP24.83■■□□□ 1.57
SMIM4-202ENST00000476842 TERF2IPQ9NYB0 399 aa24.83■■□□□ 1.57
SMIM4-202ENST00000476842 TRPM3Q9HCF6 1732 aaPredicted RBP24.83■■□□□ 1.57
SMIM4-202ENST00000476842 ADAMTS2O95450 1211 aa24.82■■□□□ 1.56
SMIM4-202ENST00000476842 SSH2Q76I76 1423 aa24.82■■□□□ 1.56
SMIM4-202ENST00000476842 ABTB2Q8N961 1025 aa24.82■■□□□ 1.56
SMIM4-202ENST00000476842 CABLES1Q8TDN4 633 aa24.82■■□□□ 1.56
SMIM4-202ENST00000476842 KTN1Q86UP2 1357 aaKnown RBP24.8■■□□□ 1.56
SMIM4-202ENST00000476842 TTC21BQ7Z4L5 1316 aa24.8■■□□□ 1.56
SMIM4-202ENST00000476842 CD163L1Q9NR16 1453 aa24.79■■□□□ 1.56
SMIM4-202ENST00000476842 RGS17Q9UGC6 210 aaPredicted RBP24.79■■□□□ 1.56
SMIM4-202ENST00000476842 HAP1P54257 671 aaPredicted RBP24.78■■□□□ 1.56
SMIM4-202ENST00000476842 ALS2Q96Q42 1657 aa24.78■■□□□ 1.56
SMIM4-202ENST00000476842 PLEKHG5O94827 1062 aa24.77■■□□□ 1.56
SMIM4-202ENST00000476842 NUTM2GQ5VZR2 741 aa24.77■■□□□ 1.56
SMIM4-202ENST00000476842 NLRP13Q86W25 1043 aa24.77■■□□□ 1.56
SMIM4-202ENST00000476842 TTC21AQ8NDW8 1320 aa24.77■■□□□ 1.56
SMIM4-202ENST00000476842 NGLY1Q96IV0 654 aa24.76■■□□□ 1.55
SMIM4-202ENST00000476842 C8orf37Q96NL8 207 aa24.76■■□□□ 1.55
SMIM4-202ENST00000476842 A0A1W2PP64 1363 aa24.75■■□□□ 1.55
SMIM4-202ENST00000476842 C11orf95C9JLR9 678 aaPredicted RBP24.74■■□□□ 1.55
SMIM4-202ENST00000476842 NLRP6P59044 892 aa24.74■■□□□ 1.55
SMIM4-202ENST00000476842 ANKRD36BQ8N2N9 1353 aa24.72■■□□□ 1.55
SMIM4-202ENST00000476842 AFF2P51816 1311 aa24.72■■□□□ 1.55
SMIM4-202ENST00000476842 ZNF772Q68DY9 489 aaPredicted RBP24.72■■□□□ 1.55
SMIM4-202ENST00000476842 FNBP4Q8N3X1 1017 aaPredicted RBP24.72■■□□□ 1.55
SMIM4-202ENST00000476842 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.71■■□□□ 1.55
SMIM4-202ENST00000476842 EDC4Q6P2E9 1401 aaKnown RBP24.7■■□□□ 1.55
SMIM4-202ENST00000476842 USP19O94966 1318 aa24.7■■□□□ 1.54
SMIM4-202ENST00000476842 POLR3GLQ9BT43 218 aa24.7■■□□□ 1.54
SMIM4-202ENST00000476842 AKAP12Q02952 1782 aa24.7■■□□□ 1.54
SMIM4-202ENST00000476842 ZEB1P37275 1124 aaPredicted RBP24.69■■□□□ 1.54
SMIM4-202ENST00000476842 GCP02774 474 aa24.68■■□□□ 1.54
SMIM4-202ENST00000476842 FAM83GA6ND36 823 aa24.67■■□□□ 1.54
SMIM4-202ENST00000476842 POTEAQ6S8J7 498 aa24.67■■□□□ 1.54
SMIM4-202ENST00000476842 NME9Q86XW9 330 aa24.66■■□□□ 1.54
SMIM4-202ENST00000476842 USP21Q9UK80 565 aa24.66■■□□□ 1.54
SMIM4-202ENST00000476842 USP31Q70CQ4 1352 aa24.66■■□□□ 1.54
SMIM4-202ENST00000476842 MON2Q7Z3U7 1717 aa24.64■■□□□ 1.54
SMIM4-202ENST00000476842 CARD14Q9BXL6 1004 aa24.64■■□□□ 1.54
SMIM4-202ENST00000476842 ZRANB1Q9UGI0 708 aa24.64■■□□□ 1.54
SMIM4-202ENST00000476842 KIF7Q2M1P5 1343 aa24.63■■□□□ 1.53
SMIM4-202ENST00000476842 ZC3H6P61129 1189 aaKnown RBP24.63■■□□□ 1.53
SMIM4-202ENST00000476842 QTRT2Q9H974 415 aaKnown RBP24.63■■□□□ 1.53
SMIM4-202ENST00000476842 NRKQ7Z2Y5 1582 aa24.63■■□□□ 1.53
SMIM4-202ENST00000476842 KCNH5Q8NCM2 988 aa24.62■■□□□ 1.53
SMIM4-202ENST00000476842 PRDM11Q9NQV5 511 aa24.62■■□□□ 1.53
SMIM4-202ENST00000476842 KIAA0232Q92628 1395 aa24.61■■□□□ 1.53
SMIM4-202ENST00000476842 SLIT2O94813 1529 aa24.61■■□□□ 1.53
SMIM4-202ENST00000476842 PIK3C2AO00443 1686 aa24.6■■□□□ 1.53
SMIM4-202ENST00000476842 BCL9LQ86UU0 1499 aa24.6■■□□□ 1.53
SMIM4-202ENST00000476842 CPDO75976 1380 aa24.6■■□□□ 1.53
SMIM4-202ENST00000476842 UNC5CLQ8IV45 518 aa24.6■■□□□ 1.53
SMIM4-202ENST00000476842 ABCA3Q99758 1704 aa24.6■■□□□ 1.53
SMIM4-202ENST00000476842 CRYBG1Q9Y4K1 1723 aa24.6■■□□□ 1.53
SMIM4-202ENST00000476842 FYB1O15117 783 aa24.59■■□□□ 1.53
SMIM4-202ENST00000476842 SLIT3O75094 1523 aa24.58■■□□□ 1.53
SMIM4-202ENST00000476842 ILDR2Q71H61 639 aa24.58■■□□□ 1.53
SMIM4-202ENST00000476842 PANK3Q9H999 370 aa24.58■■□□□ 1.53
SMIM4-202ENST00000476842 TRPC5Q9UL62 973 aaPredicted RBP24.58■■□□□ 1.53
SMIM4-202ENST00000476842 CHRNA2Q15822 529 aa24.57■■□□□ 1.52
SMIM4-202ENST00000476842 BTG4Q9NY30 223 aa24.57■■□□□ 1.52
SMIM4-202ENST00000476842 MYOM1P52179 1685 aa24.56■■□□□ 1.52
SMIM4-202ENST00000476842 MARF1Q9Y4F3 1742 aaKnown RBP24.56■■□□□ 1.52
SMIM4-202ENST00000476842 COG3Q96JB2 828 aa24.56■■□□□ 1.52
SMIM4-202ENST00000476842 PHRF1Q9P1Y6 1649 aaKnown RBP24.56■■□□□ 1.52
SMIM4-202ENST00000476842 RXRBP28702 533 aa24.55■■□□□ 1.52
SMIM4-202ENST00000476842 ARHGEF25Q86VW2 580 aa24.55■■□□□ 1.52
SMIM4-202ENST00000476842 WASHC2AQ641Q2 1341 aa24.55■■□□□ 1.52
SMIM4-202ENST00000476842 CCDC7Q96M83 1385 aa24.54■■□□□ 1.52
SMIM4-202ENST00000476842 NSD3Q9BZ95 1437 aa24.54■■□□□ 1.52
SMIM4-202ENST00000476842 RBM6P78332 1123 aaKnown RBP24.54■■□□□ 1.52
SMIM4-202ENST00000476842 OVOS2A0A0J9YW53 1432 aa24.53■■□□□ 1.52
SMIM4-202ENST00000476842 OVOS2Q6IE36 1432 aa24.53■■□□□ 1.52
SMIM4-202ENST00000476842 SOX12O15370 315 aa24.53■■□□□ 1.52
SMIM4-202ENST00000476842 GGNBP2Q9H3C7 697 aa24.53■■□□□ 1.52
SMIM4-202ENST00000476842 ATRNO75882 1429 aa24.52■■□□□ 1.52
SMIM4-202ENST00000476842 VPS72Q15906 364 aa24.52■■□□□ 1.52
SMIM4-202ENST00000476842 CGNL1Q0VF96 1302 aa24.51■■□□□ 1.51
SMIM4-202ENST00000476842 AATKQ6ZMQ8 1374 aa24.51■■□□□ 1.51
SMIM4-202ENST00000476842 COL14A1Q05707 1796 aaKnown RBP24.5■■□□□ 1.51
SMIM4-202ENST00000476842 GJD4Q96KN9 370 aaPredicted RBP24.5■■□□□ 1.51
SMIM4-202ENST00000476842 ZBTB7CA1YPR0 619 aa24.49■■□□□ 1.51
SMIM4-202ENST00000476842 USP54Q70EL1 1684 aa24.48■■□□□ 1.51
SMIM4-202ENST00000476842 NFAT5O94916 1531 aa24.47■■□□□ 1.51
SMIM4-202ENST00000476842 EVA1CP58658 441 aa24.47■■□□□ 1.51
SMIM4-202ENST00000476842 AXIN2Q9Y2T1 843 aa24.46■■□□□ 1.51
SMIM4-202ENST00000476842 KNSTRNQ9Y448 316 aa24.46■■□□□ 1.51
SMIM4-202ENST00000476842 NWD2Q9ULI1 1742 aa24.46■■□□□ 1.51
SMIM4-202ENST00000476842 PLCH1Q4KWH8 1693 aa24.44■■□□□ 1.5
SMIM4-202ENST00000476842 CAMTA1Q9Y6Y1 1673 aa24.44■■□□□ 1.5
SMIM4-202ENST00000476842 STRN4Q9NRL3 753 aa24.44■■□□□ 1.5
SMIM4-202ENST00000476842 CCDC9Q9Y3X0 531 aaKnown RBP24.44■■□□□ 1.5
SMIM4-202ENST00000476842 PER1O15534 1290 aaPredicted RBP24.43■■□□□ 1.5
SMIM4-202ENST00000476842 FBLN1P23142 703 aa24.43■■□□□ 1.5
SMIM4-202ENST00000476842 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.43■■□□□ 1.5
SMIM4-202ENST00000476842 SPATA31A5Q5VU36 1347 aa24.41■■□□□ 1.5
SMIM4-202ENST00000476842 SPATA31A7Q8IWB4 1347 aa24.41■■□□□ 1.5
SMIM4-202ENST00000476842 CDK12Q9NYV4 1490 aaPredicted RBP24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms