RNA–Protein interactions for RNA: ENST00000476691.1

CDK5-203, Transcript of cyclin dependent kinase 5, humanhuman

TSL 4

Gene CDK5, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5-203ENST00000476691 TTC21BQ7Z4L5 1316 aa17.85■□□□□ 0.45
CDK5-203ENST00000476691 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.85■□□□□ 0.45
CDK5-203ENST00000476691 COG3Q96JB2 828 aa17.85■□□□□ 0.45
CDK5-203ENST00000476691 PHF8Q9UPP1 1060 aa17.84■□□□□ 0.45
CDK5-203ENST00000476691 SSH2Q76I76 1423 aa17.83■□□□□ 0.45
CDK5-203ENST00000476691 MSH6P52701 1360 aa17.83■□□□□ 0.45
CDK5-203ENST00000476691 ATF3P18847 181 aa17.83■□□□□ 0.44
CDK5-203ENST00000476691 PMFBP1Q8TBY8 1022 aa17.83■□□□□ 0.44
CDK5-203ENST00000476691 CADPS2Q86UW7 1296 aa17.82■□□□□ 0.44
CDK5-203ENST00000476691 AATKQ6ZMQ8 1374 aa17.81■□□□□ 0.44
CDK5-203ENST00000476691 ZBED9Q6R2W3 1325 aa17.81■□□□□ 0.44
CDK5-203ENST00000476691 TNNT2P45379 298 aaPredicted RBP17.81■□□□□ 0.44
CDK5-203ENST00000476691 MTHFSP49914 203 aa17.8■□□□□ 0.44
CDK5-203ENST00000476691 NME9Q86XW9 330 aa17.8■□□□□ 0.44
CDK5-203ENST00000476691 RBM33Q96EV2 1170 aaKnown RBP17.8■□□□□ 0.44
CDK5-203ENST00000476691 BLMP54132 1417 aaPredicted RBP17.8■□□□□ 0.44
CDK5-203ENST00000476691 LRRC7Q96NW7 1537 aa17.79■□□□□ 0.44
CDK5-203ENST00000476691 ESCO1Q5FWF5 840 aa17.79■□□□□ 0.44
CDK5-203ENST00000476691 C1orf167Q5SNV9 1468 aa17.79■□□□□ 0.44
CDK5-203ENST00000476691 OVOS2A0A0J9YW53 1432 aa17.79■□□□□ 0.44
CDK5-203ENST00000476691 OVOS2Q6IE36 1432 aa17.79■□□□□ 0.44
CDK5-203ENST00000476691 USP31Q70CQ4 1352 aa17.79■□□□□ 0.44
CDK5-203ENST00000476691 USP54Q70EL1 1684 aa17.78■□□□□ 0.44
CDK5-203ENST00000476691 NUDCQ9Y266 331 aa17.77■□□□□ 0.44
CDK5-203ENST00000476691 MST1RQ04912 1400 aa17.77■□□□□ 0.44
CDK5-203ENST00000476691 SMG6Q86US8 1419 aaKnown RBP17.77■□□□□ 0.44
CDK5-203ENST00000476691 XIRP1Q702N8 1843 aaKnown RBP17.77■□□□□ 0.43
CDK5-203ENST00000476691 MAP2P11137 1827 aaKnown RBP17.76■□□□□ 0.43
CDK5-203ENST00000476691 ZNF335Q9H4Z2 1342 aaPredicted RBP17.75■□□□□ 0.43
CDK5-203ENST00000476691 PSME1Q06323 249 aa17.75■□□□□ 0.43
CDK5-203ENST00000476691 SHPRHQ149N8 1683 aa17.74■□□□□ 0.43
CDK5-203ENST00000476691 ADAMTS8Q9UP79 889 aa17.74■□□□□ 0.43
CDK5-203ENST00000476691 PNPLA6Q8IY17 1366 aa17.74■□□□□ 0.43
CDK5-203ENST00000476691 CDK12Q9NYV4 1490 aaPredicted RBP17.74■□□□□ 0.43
CDK5-203ENST00000476691 PIK3C2AO00443 1686 aa17.74■□□□□ 0.43
CDK5-203ENST00000476691 NGEFQ8N5V2 710 aa17.72■□□□□ 0.43
CDK5-203ENST00000476691 COL3A1P02461 1466 aaPredicted RBP17.71■□□□□ 0.43
CDK5-203ENST00000476691 POLKQ9UBT6 870 aa17.71■□□□□ 0.43
CDK5-203ENST00000476691 DIAPH1O60610 1272 aaKnown RBP17.7■□□□□ 0.42
CDK5-203ENST00000476691 PAK3O75914 559 aaPredicted RBP17.7■□□□□ 0.42
CDK5-203ENST00000476691 ABTB2Q8N961 1025 aa17.7■□□□□ 0.42
CDK5-203ENST00000476691 ORAI2Q96SN7 254 aa17.7■□□□□ 0.42
CDK5-203ENST00000476691 PNNQ9H307 717 aaKnown RBP17.7■□□□□ 0.42
CDK5-203ENST00000476691 ZRANB1Q9UGI0 708 aa17.7■□□□□ 0.42
CDK5-203ENST00000476691 NLRP6P59044 892 aa17.69■□□□□ 0.42
CDK5-203ENST00000476691 KIF24Q5T7B8 1368 aa17.68■□□□□ 0.42
CDK5-203ENST00000476691 PDE3BQ13370 1112 aa17.68■□□□□ 0.42
CDK5-203ENST00000476691 NPHP3Q7Z494 1330 aa17.68■□□□□ 0.42
CDK5-203ENST00000476691 TRPM3Q9HCF6 1732 aaPredicted RBP17.67■□□□□ 0.42
CDK5-203ENST00000476691 FOXO3O43524 673 aa17.66■□□□□ 0.42
CDK5-203ENST00000476691 KRT28Q7Z3Y7 464 aa17.66■□□□□ 0.42
CDK5-203ENST00000476691 SBNO1A3KN83 1393 aa17.66■□□□□ 0.42
CDK5-203ENST00000476691 MARF1Q9Y4F3 1742 aaKnown RBP17.65■□□□□ 0.42
CDK5-203ENST00000476691 PPM1GO15355 546 aaPredicted RBP17.65■□□□□ 0.42
CDK5-203ENST00000476691 U2AF1L5P0DN76 240 aaPredicted RBP17.65■□□□□ 0.42
CDK5-203ENST00000476691 U2AF1Q01081 240 aaKnown RBP eCLIP17.65■□□□□ 0.42
CDK5-203ENST00000476691 KCNH5Q8NCM2 988 aa17.65■□□□□ 0.42
CDK5-203ENST00000476691 RUNDC1Q96C34 613 aa17.65■□□□□ 0.42
CDK5-203ENST00000476691 EMILIN1Q9Y6C2 1016 aa17.65■□□□□ 0.42
CDK5-203ENST00000476691 NCBP3Q53F19 620 aaKnown RBP17.64■□□□□ 0.41
CDK5-203ENST00000476691 U2SURPO15042 1029 aaKnown RBP17.63■□□□□ 0.41
CDK5-203ENST00000476691 RRS1Q15050 365 aaKnown RBP17.63■□□□□ 0.41
CDK5-203ENST00000476691 RTL1A6NKG5 1358 aa17.63■□□□□ 0.41
CDK5-203ENST00000476691 FLT4P35916 1363 aa17.63■□□□□ 0.41
CDK5-203ENST00000476691 NEFMP07197 916 aa17.62■□□□□ 0.41
CDK5-203ENST00000476691 SLAIN2Q9P270 581 aa17.62■□□□□ 0.41
CDK5-203ENST00000476691 ALS2Q96Q42 1657 aa17.61■□□□□ 0.41
CDK5-203ENST00000476691 SLIT3O75094 1523 aa17.61■□□□□ 0.41
CDK5-203ENST00000476691 FCHSD2O94868 740 aa17.6■□□□□ 0.41
CDK5-203ENST00000476691 LTBP4Q8N2S1 1624 aa17.6■□□□□ 0.41
CDK5-203ENST00000476691 TNS3Q68CZ2 1445 aa17.59■□□□□ 0.41
CDK5-203ENST00000476691 ARHGEF10O15013 1369 aa17.59■□□□□ 0.41
CDK5-203ENST00000476691 MAP3K19Q56UN5 1328 aa17.59■□□□□ 0.41
CDK5-203ENST00000476691 MAPK8IP3Q9UPT6 1336 aa17.59■□□□□ 0.41
CDK5-203ENST00000476691 IL13P35225 146 aa17.59■□□□□ 0.41
CDK5-203ENST00000476691 AMPHP49418 695 aa17.59■□□□□ 0.41
CDK5-203ENST00000476691 BRINP3Q76B58 766 aa17.59■□□□□ 0.41
CDK5-203ENST00000476691 CCDC146Q8IYE0 955 aa17.59■□□□□ 0.41
CDK5-203ENST00000476691 PEAK1Q9H792 1746 aa17.58■□□□□ 0.41
CDK5-203ENST00000476691 PXDNQ92626 1479 aa17.58■□□□□ 0.41
CDK5-203ENST00000476691 USP19O94966 1318 aa17.58■□□□□ 0.4
CDK5-203ENST00000476691 FBLN1P23142 703 aa17.58■□□□□ 0.4
CDK5-203ENST00000476691 PHRF1Q9P1Y6 1649 aaKnown RBP17.58■□□□□ 0.4
CDK5-203ENST00000476691 NFAT5O94916 1531 aa17.57■□□□□ 0.4
CDK5-203ENST00000476691 IQSEC2Q5JU85 1478 aa17.57■□□□□ 0.4
CDK5-203ENST00000476691 APAF1O14727 1248 aa17.57■□□□□ 0.4
CDK5-203ENST00000476691 NUTM2GQ5VZR2 741 aa17.57■□□□□ 0.4
CDK5-203ENST00000476691 LTN1O94822 1766 aa17.56■□□□□ 0.4
CDK5-203ENST00000476691 SOX12O15370 315 aa17.56■□□□□ 0.4
CDK5-203ENST00000476691 XPCQ01831 940 aaPredicted RBP17.56■□□□□ 0.4
CDK5-203ENST00000476691 LMOD2Q6P5Q4 547 aa17.56■□□□□ 0.4
CDK5-203ENST00000476691 AEBP2Q6ZN18 517 aaPredicted RBP17.56■□□□□ 0.4
CDK5-203ENST00000476691 NHSL1Q5SYE7 1610 aa17.55■□□□□ 0.4
CDK5-203ENST00000476691 CCDC27Q2M243 656 aa17.55■□□□□ 0.4
CDK5-203ENST00000476691 MED1Q15648 1581 aaPredicted RBP17.54■□□□□ 0.4
CDK5-203ENST00000476691 EIF4A2Q14240 407 aaKnown RBP17.54■□□□□ 0.4
CDK5-203ENST00000476691 TCP11L2Q8N4U5 519 aa17.54■□□□□ 0.4
CDK5-203ENST00000476691 SALL2Q9Y467 1007 aaPredicted RBP17.54■□□□□ 0.4
CDK5-203ENST00000476691 SOS2Q07890 1332 aaPredicted RBP17.53■□□□□ 0.4
CDK5-203ENST00000476691 SPATA31A3Q5VYP0 1347 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms