RNA–Protein interactions for RNA: ENST00000476641.2

CHD6-207, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-207ENST00000476641 RTN4Q9NQC3 1192 aaKnown RBP12.64□□□□□ -0.39
CHD6-207ENST00000476641 ZNF777Q9ULD5 760 aaPredicted RBP12.64□□□□□ -0.39
CHD6-207ENST00000476641 ADGRG1Q9Y653 693 aa12.64□□□□□ -0.39
CHD6-207ENST00000476641 KMT5BQ4FZB7 885 aa12.63□□□□□ -0.39
CHD6-207ENST00000476641 GPATCH8Q9UKJ3 1502 aaKnown RBP12.62□□□□□ -0.39
CHD6-207ENST00000476641 MTUS2Q5JR59 1369 aa12.62□□□□□ -0.39
CHD6-207ENST00000476641 CDC42BPBQ9Y5S2 1711 aa12.62□□□□□ -0.39
CHD6-207ENST00000476641 PREX2Q70Z35 1606 aa12.62□□□□□ -0.39
CHD6-207ENST00000476641 ADAMTSL3P82987 1691 aa12.61□□□□□ -0.39
CHD6-207ENST00000476641 RCCD1A6NED2 376 aa12.61□□□□□ -0.39
CHD6-207ENST00000476641 ACTN4O43707 911 aaKnown RBP12.61□□□□□ -0.39
CHD6-207ENST00000476641 CFHP08603 1231 aa12.61□□□□□ -0.39
CHD6-207ENST00000476641 SPRYD7Q5W111 196 aa12.61□□□□□ -0.39
CHD6-207ENST00000476641 ANKLE1Q8NAG6 615 aa12.61□□□□□ -0.39
CHD6-207ENST00000476641 KCNV2Q8TDN2 545 aa12.61□□□□□ -0.39
CHD6-207ENST00000476641 PTPRMP28827 1452 aa12.6□□□□□ -0.39
CHD6-207ENST00000476641 MADDQ8WXG6 1647 aa12.6□□□□□ -0.39
CHD6-207ENST00000476641 NUTM2FA1L443 756 aa12.6□□□□□ -0.39
CHD6-207ENST00000476641 PPEF1O14829 653 aaPredicted RBP12.6□□□□□ -0.39
CHD6-207ENST00000476641 S1PR4O95977 384 aa12.6□□□□□ -0.39
CHD6-207ENST00000476641 FAM161AQ3B820 660 aa12.6□□□□□ -0.39
CHD6-207ENST00000476641 ABCC1P33527 1531 aa12.6□□□□□ -0.39
CHD6-207ENST00000476641 ZNF644Q9H582 1327 aaPredicted RBP12.6□□□□□ -0.39
CHD6-207ENST00000476641 BCORL1Q5H9F3 1711 aa12.59□□□□□ -0.39
CHD6-207ENST00000476641 MAGI2Q86UL8 1455 aa12.59□□□□□ -0.39
CHD6-207ENST00000476641 HNRNPMP52272 730 aaKnown RBP eCLIP12.59□□□□□ -0.398e-7■■■■□ 26.4
CHD6-207ENST00000476641 ZNF518AQ6AHZ1 1483 aa12.59□□□□□ -0.39
CHD6-207ENST00000476641 KDM5CP41229 1560 aa12.58□□□□□ -0.4
CHD6-207ENST00000476641 PKDCCQ504Y2 493 aa12.58□□□□□ -0.4
CHD6-207ENST00000476641 CDC42BPAQ5VT25 1732 aa12.58□□□□□ -0.4
CHD6-207ENST00000476641 ZNF598Q86UK7 904 aaKnown RBP12.58□□□□□ -0.4
CHD6-207ENST00000476641 TSHZ2Q9NRE2 1034 aa12.58□□□□□ -0.4
CHD6-207ENST00000476641 HECW2Q9P2P5 1572 aa12.58□□□□□ -0.4
CHD6-207ENST00000476641 ATP10AO60312 1499 aa12.58□□□□□ -0.4
CHD6-207ENST00000476641 CCNB3Q8WWL7 1395 aa12.57□□□□□ -0.4
CHD6-207ENST00000476641 SAMD9LQ8IVG5 1584 aa12.57□□□□□ -0.4
CHD6-207ENST00000476641 ZNF775Q96BV0 537 aaPredicted RBP12.57□□□□□ -0.4
CHD6-207ENST00000476641 CFDP1Q9UEE9 299 aaPredicted RBP12.57□□□□□ -0.4
CHD6-207ENST00000476641 SYCP2Q9BX26 1530 aa12.57□□□□□ -0.4
CHD6-207ENST00000476641 C9orf84Q5VXU9 1444 aa12.56□□□□□ -0.4
CHD6-207ENST00000476641 VPS8Q8N3P4 1428 aa12.56□□□□□ -0.4
CHD6-207ENST00000476641 LIAT1Q6ZQX7 453 aa12.56□□□□□ -0.4
CHD6-207ENST00000476641 MYT1Q01538 1121 aa12.55□□□□□ -0.4
CHD6-207ENST00000476641 EHBP1L1Q8N3D4 1523 aa12.55□□□□□ -0.4
CHD6-207ENST00000476641 TIAM1Q13009 1591 aa12.55□□□□□ -0.4
CHD6-207ENST00000476641 DIP2CQ9Y2E4 1556 aa12.55□□□□□ -0.4
CHD6-207ENST00000476641 ITSN2Q9NZM3 1697 aa12.54□□□□□ -0.4
CHD6-207ENST00000476641 DGAT1O75907 488 aa12.54□□□□□ -0.4
CHD6-207ENST00000476641 ADH1BP00325 375 aa12.54□□□□□ -0.4
CHD6-207ENST00000476641 SLC10A3P09131 477 aa12.54□□□□□ -0.4
CHD6-207ENST00000476641 PRR20EP86478 221 aa12.54□□□□□ -0.4
CHD6-207ENST00000476641 PRR20CP86479 221 aa12.54□□□□□ -0.4
CHD6-207ENST00000476641 PRR20DP86480 221 aa12.54□□□□□ -0.4
CHD6-207ENST00000476641 PRR20BP86481 221 aa12.54□□□□□ -0.4
CHD6-207ENST00000476641 PRR20AP86496 221 aa12.54□□□□□ -0.4
CHD6-207ENST00000476641 KANK4Q5T7N3 995 aaPredicted RBP12.54□□□□□ -0.4
CHD6-207ENST00000476641 ZNF697Q5TEC3 545 aa12.54□□□□□ -0.4
CHD6-207ENST00000476641 ABCA6Q8N139 1617 aa12.54□□□□□ -0.4
CHD6-207ENST00000476641 RIMS1Q86UR5 1692 aaKnown RBP12.54□□□□□ -0.4
CHD6-207ENST00000476641 MLH3Q9UHC1 1453 aa12.53□□□□□ -0.4
CHD6-207ENST00000476641 NR1I2O75469 434 aa12.53□□□□□ -0.4
CHD6-207ENST00000476641 NCOA2Q15596 1464 aa12.53□□□□□ -0.4
CHD6-207ENST00000476641 CEBPAP49715 358 aaPredicted RBP12.52□□□□□ -0.41
CHD6-207ENST00000476641 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.51□□□□□ -0.41
CHD6-207ENST00000476641 TNFRSF10AO00220 468 aa12.51□□□□□ -0.41
CHD6-207ENST00000476641 FCHSD2O94868 740 aa12.51□□□□□ -0.41
CHD6-207ENST00000476641 SPAG9O60271 1321 aaKnown RBP12.51□□□□□ -0.41
CHD6-207ENST00000476641 FAM187AA6NFU0 413 aa12.5□□□□□ -0.41
CHD6-207ENST00000476641 SLC6A16Q9GZN6 736 aa12.5□□□□□ -0.41
CHD6-207ENST00000476641 KIAA1107Q9UPP5 1409 aa12.5□□□□□ -0.41
CHD6-207ENST00000476641 KIDINS220Q9ULH0 1771 aa12.5□□□□□ -0.41
CHD6-207ENST00000476641 LRRC9Q6ZRR7 1453 aa12.49□□□□□ -0.41
CHD6-207ENST00000476641 MBD5Q9P267 1494 aa12.48□□□□□ -0.41
CHD6-207ENST00000476641 GDF9O60383 454 aa12.48□□□□□ -0.41
CHD6-207ENST00000476641 HSPA2P54652 639 aa12.48□□□□□ -0.41
CHD6-207ENST00000476641 LMTK3Q96Q04 1460 aa12.47□□□□□ -0.41
CHD6-207ENST00000476641 PLA2G2CQ5R387 149 aa12.47□□□□□ -0.41
CHD6-207ENST00000476641 PLEKHH2Q8IVE3 1493 aa12.46□□□□□ -0.41
CHD6-207ENST00000476641 POTECB2RU33 542 aa12.46□□□□□ -0.41
CHD6-207ENST00000476641 SCUBE3Q8IX30 993 aa12.46□□□□□ -0.41
CHD6-207ENST00000476641 PXYLP1Q8TE99 480 aa12.46□□□□□ -0.41
CHD6-207ENST00000476641 ATP7AQ04656 1500 aa12.46□□□□□ -0.42
CHD6-207ENST00000476641 CAMSAP2Q08AD1 1489 aa12.46□□□□□ -0.42
CHD6-207ENST00000476641 FER1L4A9Z1Z3 1794 aa12.46□□□□□ -0.42
CHD6-207ENST00000476641 REREQ9P2R6 1566 aa12.45□□□□□ -0.42
CHD6-207ENST00000476641 OATP04181 439 aa12.45□□□□□ -0.42
CHD6-207ENST00000476641 INO80Q9ULG1 1556 aaPredicted RBP12.44□□□□□ -0.42
CHD6-207ENST00000476641 AGLP35573 1532 aa12.44□□□□□ -0.42
CHD6-207ENST00000476641 PUS10Q3MIT2 529 aaKnown RBP12.44□□□□□ -0.42
CHD6-207ENST00000476641 SUPT6HQ7KZ85 1726 aaKnown RBP12.44□□□□□ -0.42
CHD6-207ENST00000476641 SEMA3EO15041 775 aa12.43□□□□□ -0.42
CHD6-207ENST00000476641 A2MP01023 1474 aa12.42□□□□□ -0.42
CHD6-207ENST00000476641 RSPH4AQ5TD94 716 aa12.42□□□□□ -0.42
CHD6-207ENST00000476641 SPSB2Q99619 263 aa12.42□□□□□ -0.42
CHD6-207ENST00000476641 METTL3Q86U44 580 aaKnown RBP12.41□□□□□ -0.42
CHD6-207ENST00000476641 MAP3K1Q13233 1512 aa12.41□□□□□ -0.42
CHD6-207ENST00000476641 CCDC141Q6ZP82 1450 aa12.4□□□□□ -0.42
CHD6-207ENST00000476641 PLXNC1O60486 1568 aa12.4□□□□□ -0.42
CHD6-207ENST00000476641 GGT6Q6P531 493 aa12.4□□□□□ -0.42
CHD6-207ENST00000476641 ST8SIA5O15466 376 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms