RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 TRPM3Q9HCF6 1732 aaPredicted RBP14.47□□□□□ -0.09
CCM2-208ENST00000476594 SLC24A1O60721 1099 aa14.47□□□□□ -0.09
CCM2-208ENST00000476594 PLEKHG5O94827 1062 aa14.46□□□□□ -0.09
CCM2-208ENST00000476594 NBPF8Q3BBV2 869 aa14.46□□□□□ -0.09
CCM2-208ENST00000476594 CABP2Q9NPB3 220 aa14.46□□□□□ -0.09
CCM2-208ENST00000476594 TIMELESSQ9UNS1 1208 aa14.46□□□□□ -0.09
CCM2-208ENST00000476594 ATAD2Q6PL18 1390 aa14.46□□□□□ -0.1
CCM2-208ENST00000476594 SBNO2Q9Y2G9 1366 aa14.46□□□□□ -0.1
CCM2-208ENST00000476594 ALS2Q96Q42 1657 aa14.46□□□□□ -0.1
CCM2-208ENST00000476594 ATRNO75882 1429 aa14.45□□□□□ -0.1
CCM2-208ENST00000476594 UNC5CLQ8IV45 518 aa14.45□□□□□ -0.1
CCM2-208ENST00000476594 CABLES1Q8TDN4 633 aa14.45□□□□□ -0.1
CCM2-208ENST00000476594 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.44□□□□□ -0.1
CCM2-208ENST00000476594 PCGF6Q9BYE7 350 aa14.44□□□□□ -0.1
CCM2-208ENST00000476594 SLIT2O94813 1529 aa14.44□□□□□ -0.1
CCM2-208ENST00000476594 ABCA3Q99758 1704 aa14.44□□□□□ -0.1
CCM2-208ENST00000476594 BCL9LQ86UU0 1499 aa14.43□□□□□ -0.1
CCM2-208ENST00000476594 RGS12O14924 1447 aa14.42□□□□□ -0.1
CCM2-208ENST00000476594 NWD2Q9ULI1 1742 aa14.42□□□□□ -0.1
CCM2-208ENST00000476594 ABTB2Q8N961 1025 aa14.42□□□□□ -0.1
CCM2-208ENST00000476594 GJD4Q96KN9 370 aaPredicted RBP14.42□□□□□ -0.1
CCM2-208ENST00000476594 ZNF692Q9BU19 519 aaPredicted RBP14.42□□□□□ -0.1
CCM2-208ENST00000476594 NLRP13Q86W25 1043 aa14.41□□□□□ -0.1
CCM2-208ENST00000476594 PRDM11Q9NQV5 511 aa14.41□□□□□ -0.1
CCM2-208ENST00000476594 CABP1Q9NZU7 370 aa14.41□□□□□ -0.1
CCM2-208ENST00000476594 CCDC9Q9Y3X0 531 aaKnown RBP14.41□□□□□ -0.1
CCM2-208ENST00000476594 USP6P35125 1406 aa14.4□□□□□ -0.1
CCM2-208ENST00000476594 COL14A1Q05707 1796 aaKnown RBP14.39□□□□□ -0.11
CCM2-208ENST00000476594 PLCH1Q4KWH8 1693 aa14.39□□□□□ -0.11
CCM2-208ENST00000476594 VPS72Q15906 364 aa14.39□□□□□ -0.11
CCM2-208ENST00000476594 BTG4Q9NY30 223 aa14.38□□□□□ -0.11
CCM2-208ENST00000476594 FAM83GA6ND36 823 aa14.37□□□□□ -0.11
CCM2-208ENST00000476594 PUS7Q96PZ0 661 aaKnown RBP14.37□□□□□ -0.11
CCM2-208ENST00000476594 PHRF1Q9P1Y6 1649 aaKnown RBP14.37□□□□□ -0.11
CCM2-208ENST00000476594 NUTM2GQ5VZR2 741 aa14.36□□□□□ -0.11
CCM2-208ENST00000476594 HDGFL2Q7Z4V5 671 aaPredicted RBP14.36□□□□□ -0.11
CCM2-208ENST00000476594 CCER1Q8TC90 406 aaPredicted RBP14.36□□□□□ -0.11
CCM2-208ENST00000476594 USP19O94966 1318 aa14.36□□□□□ -0.11
CCM2-208ENST00000476594 TTC21AQ8NDW8 1320 aa14.36□□□□□ -0.11
CCM2-208ENST00000476594 KIAA0232Q92628 1395 aa14.35□□□□□ -0.11
CCM2-208ENST00000476594 CRYBG1Q9Y4K1 1723 aa14.35□□□□□ -0.11
CCM2-208ENST00000476594 NLRP6P59044 892 aa14.35□□□□□ -0.11
CCM2-208ENST00000476594 UPF1Q92900 1129 aaKnown RBP eCLIP14.35□□□□□ -0.11
CCM2-208ENST00000476594 KTN1Q86UP2 1357 aaKnown RBP14.34□□□□□ -0.11
CCM2-208ENST00000476594 NINLQ9Y2I6 1382 aa14.34□□□□□ -0.11
CCM2-208ENST00000476594 A0A0G2JS52 829 aa14.34□□□□□ -0.11
CCM2-208ENST00000476594 ZC3H6P61129 1189 aaKnown RBP14.34□□□□□ -0.11
CCM2-208ENST00000476594 MYT1Q01538 1121 aa14.34□□□□□ -0.11
CCM2-208ENST00000476594 TMC1Q8TDI8 760 aa14.34□□□□□ -0.11
CCM2-208ENST00000476594 TERF2IPQ9NYB0 399 aa14.34□□□□□ -0.11
CCM2-208ENST00000476594 CDCA8Q53HL2 280 aa14.33□□□□□ -0.12
CCM2-208ENST00000476594 KCNH5Q8NCM2 988 aa14.33□□□□□ -0.12
CCM2-208ENST00000476594 GLI3P10071 1580 aa14.33□□□□□ -0.12
CCM2-208ENST00000476594 NRKQ7Z2Y5 1582 aa14.33□□□□□ -0.12
CCM2-208ENST00000476594 CPDO75976 1380 aa14.33□□□□□ -0.12
CCM2-208ENST00000476594 USP47Q96K76 1375 aa14.33□□□□□ -0.12
CCM2-208ENST00000476594 ST20-MTHFSA0A0A6YYL1 179 aa14.32□□□□□ -0.12
CCM2-208ENST00000476594 GCP02774 474 aa14.32□□□□□ -0.12
CCM2-208ENST00000476594 EVA1CP58658 441 aa14.32□□□□□ -0.12
CCM2-208ENST00000476594 TMF1P82094 1093 aa14.32□□□□□ -0.12
CCM2-208ENST00000476594 TTC21BQ7Z4L5 1316 aa14.32□□□□□ -0.12
CCM2-208ENST00000476594 NRAPQ86VF7 1730 aa14.32□□□□□ -0.12
CCM2-208ENST00000476594 AKAP12Q02952 1782 aa14.32□□□□□ -0.12
CCM2-208ENST00000476594 CPSF1Q10570 1443 aaKnown RBP14.32□□□□□ -0.12
CCM2-208ENST00000476594 CCDC125Q86Z20 511 aa14.31□□□□□ -0.12
CCM2-208ENST00000476594 CHRNA2Q15822 529 aa14.3□□□□□ -0.12
CCM2-208ENST00000476594 SEPT12Q8IYM1 358 aa14.3□□□□□ -0.12
CCM2-208ENST00000476594 SSH2Q76I76 1423 aa14.3□□□□□ -0.12
CCM2-208ENST00000476594 ONECUT3O60422 494 aaPredicted RBP14.29□□□□□ -0.12
CCM2-208ENST00000476594 STRN4Q9NRL3 753 aa14.29□□□□□ -0.12
CCM2-208ENST00000476594 SPATA31A5Q5VU36 1347 aa14.29□□□□□ -0.12
CCM2-208ENST00000476594 SPATA31A7Q8IWB4 1347 aa14.29□□□□□ -0.12
CCM2-208ENST00000476594 SLIT3O75094 1523 aa14.29□□□□□ -0.12
CCM2-208ENST00000476594 ZBTB7CA1YPR0 619 aa14.28□□□□□ -0.12
CCM2-208ENST00000476594 EDC4Q6P2E9 1401 aaKnown RBP14.28□□□□□ -0.12
CCM2-208ENST00000476594 MON2Q7Z3U7 1717 aa14.28□□□□□ -0.12
CCM2-208ENST00000476594 TESK2Q96S53 571 aa14.28□□□□□ -0.12
CCM2-208ENST00000476594 PIK3C2AO00443 1686 aa14.27□□□□□ -0.12
CCM2-208ENST00000476594 SF3B2Q13435 895 aaKnown RBP14.27□□□□□ -0.13
CCM2-208ENST00000476594 FAM98CQ17RN3 349 aaKnown RBP14.27□□□□□ -0.13
CCM2-208ENST00000476594 KRT27Q7Z3Y8 459 aa14.27□□□□□ -0.13
CCM2-208ENST00000476594 AATKQ6ZMQ8 1374 aa14.26□□□□□ -0.13
CCM2-208ENST00000476594 SPATA31A1Q5TZJ5 1347 aa14.26□□□□□ -0.13
CCM2-208ENST00000476594 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.26□□□□□ -0.13
CCM2-208ENST00000476594 SLC12A5Q9H2X9 1139 aa14.25□□□□□ -0.13
CCM2-208ENST00000476594 THRAP3Q9Y2W1 955 aaKnown RBP14.25□□□□□ -0.13
CCM2-208ENST00000476594 A0A1W2PP64 1363 aa14.24□□□□□ -0.13
CCM2-208ENST00000476594 USP31Q70CQ4 1352 aa14.24□□□□□ -0.13
CCM2-208ENST00000476594 LMO7Q8WWI1 1683 aa14.23□□□□□ -0.13
CCM2-208ENST00000476594 BARGINQ6ZT62 677 aa14.23□□□□□ -0.13
CCM2-208ENST00000476594 TCP11L2Q8N4U5 519 aa14.23□□□□□ -0.13
CCM2-208ENST00000476594 ABCC6O95255 1503 aa14.23□□□□□ -0.13
CCM2-208ENST00000476594 COL5A2P05997 1499 aaPredicted RBP14.23□□□□□ -0.13
CCM2-208ENST00000476594 CD163L1Q9NR16 1453 aa14.23□□□□□ -0.13
CCM2-208ENST00000476594 CAMTA1Q9Y6Y1 1673 aa14.23□□□□□ -0.13
CCM2-208ENST00000476594 BLMP54132 1417 aaPredicted RBP14.23□□□□□ -0.13
CCM2-208ENST00000476594 ANKRD36BQ8N2N9 1353 aa14.22□□□□□ -0.13
CCM2-208ENST00000476594 SOX12O15370 315 aa14.22□□□□□ -0.13
CCM2-208ENST00000476594 USP35Q9P2H5 1018 aa14.22□□□□□ -0.13
CCM2-208ENST00000476594 CRB1P82279 1406 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms