RNA–Protein interactions for RNA: ENST00000476467.1

PSMB4-204, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 2,067 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-204ENST00000476467 KIF20BQ96Q89 1820 aa18.08■□□□□ 0.48
PSMB4-204ENST00000476467 CGNL1Q0VF96 1302 aa18.08■□□□□ 0.48
PSMB4-204ENST00000476467 PSME1Q06323 249 aa18.07■□□□□ 0.48
PSMB4-204ENST00000476467 PXDNQ92626 1479 aa18.07■□□□□ 0.48
PSMB4-204ENST00000476467 NPC1L1Q9UHC9 1359 aa18.07■□□□□ 0.48
PSMB4-204ENST00000476467 AHDC1Q5TGY3 1603 aaPredicted RBP18.06■□□□□ 0.48
PSMB4-204ENST00000476467 TTC21BQ7Z4L5 1316 aa18.06■□□□□ 0.48
PSMB4-204ENST00000476467 AMER1Q5JTC6 1135 aaPredicted RBP18.06■□□□□ 0.48
PSMB4-204ENST00000476467 TTC21AQ8NDW8 1320 aa18.06■□□□□ 0.48
PSMB4-204ENST00000476467 NSD2O96028 1365 aa18.06■□□□□ 0.48
PSMB4-204ENST00000476467 KRT28Q7Z3Y7 464 aa18.05■□□□□ 0.48
PSMB4-204ENST00000476467 DDX17Q92841 729 aaKnown RBP18.04■□□□□ 0.48
PSMB4-204ENST00000476467 ANKRD26Q9UPS8 1709 aa18.04■□□□□ 0.48
PSMB4-204ENST00000476467 XPCQ01831 940 aaPredicted RBP18.03■□□□□ 0.48
PSMB4-204ENST00000476467 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.03■□□□□ 0.48
PSMB4-204ENST00000476467 SBNO1A3KN83 1393 aa18.03■□□□□ 0.48
PSMB4-204ENST00000476467 PIK3C2AO00443 1686 aa18.03■□□□□ 0.48
PSMB4-204ENST00000476467 PIP4K2BP78356 416 aa18.03■□□□□ 0.48
PSMB4-204ENST00000476467 SOS2Q07890 1332 aaPredicted RBP18.02■□□□□ 0.48
PSMB4-204ENST00000476467 USP54Q70EL1 1684 aa18.02■□□□□ 0.47
PSMB4-204ENST00000476467 ALS2Q96Q42 1657 aa18.02■□□□□ 0.47
PSMB4-204ENST00000476467 FYB1O15117 783 aa18.01■□□□□ 0.47
PSMB4-204ENST00000476467 NME9Q86XW9 330 aa18.01■□□□□ 0.47
PSMB4-204ENST00000476467 TNS3Q68CZ2 1445 aa18.01■□□□□ 0.47
PSMB4-204ENST00000476467 PAK3O75914 559 aaPredicted RBP18■□□□□ 0.47
PSMB4-204ENST00000476467 CC2D1BQ5T0F9 858 aaKnown RBP18■□□□□ 0.47
PSMB4-204ENST00000476467 PHLPP1O60346 1717 aa17.99■□□□□ 0.47
PSMB4-204ENST00000476467 OVOS2A0A0J9YW53 1432 aa17.99■□□□□ 0.47
PSMB4-204ENST00000476467 OVOS2Q6IE36 1432 aa17.99■□□□□ 0.47
PSMB4-204ENST00000476467 USP31Q70CQ4 1352 aa17.99■□□□□ 0.47
PSMB4-204ENST00000476467 ANP32CO43423 234 aa17.99■□□□□ 0.47
PSMB4-204ENST00000476467 GGNBP2Q9H3C7 697 aa17.99■□□□□ 0.47
PSMB4-204ENST00000476467 PARD3Q8TEW0 1356 aa17.98■□□□□ 0.47
PSMB4-204ENST00000476467 MARF1Q9Y4F3 1742 aaKnown RBP17.98■□□□□ 0.47
PSMB4-204ENST00000476467 SPATA31A3Q5VYP0 1347 aa17.97■□□□□ 0.47
PSMB4-204ENST00000476467 COL16A1Q07092 1604 aaPredicted RBP17.97■□□□□ 0.47
PSMB4-204ENST00000476467 CNGB1Q14028 1251 aaPredicted RBP17.97■□□□□ 0.47
PSMB4-204ENST00000476467 ABTB2Q8N961 1025 aa17.97■□□□□ 0.47
PSMB4-204ENST00000476467 ARHGEF10O15013 1369 aa17.96■□□□□ 0.47
PSMB4-204ENST00000476467 COG3Q96JB2 828 aa17.96■□□□□ 0.47
PSMB4-204ENST00000476467 PRKRIP1Q9H875 184 aaPredicted RBP17.96■□□□□ 0.47
PSMB4-204ENST00000476467 RALBP1Q15311 655 aa17.95■□□□□ 0.46
PSMB4-204ENST00000476467 ZRANB1Q9UGI0 708 aa17.95■□□□□ 0.46
PSMB4-204ENST00000476467 MORC1Q86VD1 984 aa17.95■□□□□ 0.46
PSMB4-204ENST00000476467 MED1Q15648 1581 aaPredicted RBP17.95■□□□□ 0.46
PSMB4-204ENST00000476467 NLRP6P59044 892 aa17.94■□□□□ 0.46
PSMB4-204ENST00000476467 LMOD2Q6P5Q4 547 aa17.94■□□□□ 0.46
PSMB4-204ENST00000476467 NLRP13Q86W25 1043 aa17.93■□□□□ 0.46
PSMB4-204ENST00000476467 SLIT3O75094 1523 aa17.92■□□□□ 0.46
PSMB4-204ENST00000476467 LRRC59Q96AG4 307 aaKnown RBP17.92■□□□□ 0.46
PSMB4-204ENST00000476467 USP19O94966 1318 aa17.92■□□□□ 0.46
PSMB4-204ENST00000476467 NUTM2GQ5VZR2 741 aa17.92■□□□□ 0.46
PSMB4-204ENST00000476467 CRYBG1Q9Y4K1 1723 aa17.91■□□□□ 0.46
PSMB4-204ENST00000476467 PHRF1Q9P1Y6 1649 aaKnown RBP17.9■□□□□ 0.46
PSMB4-204ENST00000476467 COL22A1Q8NFW1 1626 aaPredicted RBP17.9■□□□□ 0.46
PSMB4-204ENST00000476467 MYBBP1AQ9BQG0 1328 aaKnown RBP17.89■□□□□ 0.45
PSMB4-204ENST00000476467 AATKQ6ZMQ8 1374 aa17.89■□□□□ 0.45
PSMB4-204ENST00000476467 PNPLA6Q8IY17 1366 aa17.89■□□□□ 0.45
PSMB4-204ENST00000476467 ABCA3Q99758 1704 aa17.89■□□□□ 0.45
PSMB4-204ENST00000476467 NFAT5O94916 1531 aa17.88■□□□□ 0.45
PSMB4-204ENST00000476467 TNNT2P45379 298 aaPredicted RBP17.87■□□□□ 0.45
PSMB4-204ENST00000476467 PPP2R1AP30153 589 aa17.87■□□□□ 0.45
PSMB4-204ENST00000476467 SHPRHQ149N8 1683 aa17.87■□□□□ 0.45
PSMB4-204ENST00000476467 KCNH5Q8NCM2 988 aa17.86■□□□□ 0.45
PSMB4-204ENST00000476467 PELP1Q8IZL8 1130 aaKnown RBP17.86■□□□□ 0.45
PSMB4-204ENST00000476467 MAP2P11137 1827 aaKnown RBP17.85■□□□□ 0.45
PSMB4-204ENST00000476467 SMG6Q86US8 1419 aaKnown RBP17.85■□□□□ 0.45
PSMB4-204ENST00000476467 CCER2I3L3R5 266 aa17.84■□□□□ 0.45
PSMB4-204ENST00000476467 SOX12O15370 315 aa17.84■□□□□ 0.45
PSMB4-204ENST00000476467 GCP02774 474 aa17.84■□□□□ 0.45
PSMB4-204ENST00000476467 HSPA1LP34931 641 aa17.84■□□□□ 0.45
PSMB4-204ENST00000476467 JCADQ9P266 1359 aa17.83■□□□□ 0.45
PSMB4-204ENST00000476467 PLEKHG5O94827 1062 aa17.83■□□□□ 0.44
PSMB4-204ENST00000476467 CABLES1Q8TDN4 633 aa17.83■□□□□ 0.44
PSMB4-204ENST00000476467 LTN1O94822 1766 aa17.82■□□□□ 0.44
PSMB4-204ENST00000476467 FBLN1P23142 703 aa17.82■□□□□ 0.44
PSMB4-204ENST00000476467 FBXO41Q8TF61 875 aa17.81■□□□□ 0.44
PSMB4-204ENST00000476467 POLKQ9UBT6 870 aa17.81■□□□□ 0.44
PSMB4-204ENST00000476467 RRS1Q15050 365 aaKnown RBP17.81■□□□□ 0.44
PSMB4-204ENST00000476467 CDK12Q9NYV4 1490 aaPredicted RBP17.8■□□□□ 0.44
PSMB4-204ENST00000476467 PEAK1Q9H792 1746 aa17.8■□□□□ 0.44
PSMB4-204ENST00000476467 MAP3K19Q56UN5 1328 aa17.8■□□□□ 0.44
PSMB4-204ENST00000476467 MTHFSP49914 203 aa17.8■□□□□ 0.44
PSMB4-204ENST00000476467 KIF24Q5T7B8 1368 aa17.8■□□□□ 0.44
PSMB4-204ENST00000476467 HAP1P54257 671 aaPredicted RBP17.79■□□□□ 0.44
PSMB4-204ENST00000476467 EMILIN1Q9Y6C2 1016 aa17.79■□□□□ 0.44
PSMB4-204ENST00000476467 RTL1A6NKG5 1358 aa17.79■□□□□ 0.44
PSMB4-204ENST00000476467 CPDO75976 1380 aa17.79■□□□□ 0.44
PSMB4-204ENST00000476467 ARHGEF25Q86VW2 580 aa17.78■□□□□ 0.44
PSMB4-204ENST00000476467 ABCC6O95255 1503 aa17.78■□□□□ 0.44
PSMB4-204ENST00000476467 FLT4P35916 1363 aa17.77■□□□□ 0.44
PSMB4-204ENST00000476467 ZC3H6P61129 1189 aaKnown RBP17.76■□□□□ 0.43
PSMB4-204ENST00000476467 CFAP53Q96M91 514 aa17.76■□□□□ 0.43
PSMB4-204ENST00000476467 COL3A1P02461 1466 aaPredicted RBP17.76■□□□□ 0.43
PSMB4-204ENST00000476467 INSRP06213 1382 aa17.76■□□□□ 0.43
PSMB4-204ENST00000476467 KIAA0232Q92628 1395 aa17.76■□□□□ 0.43
PSMB4-204ENST00000476467 PPM1GO15355 546 aaPredicted RBP17.76■□□□□ 0.43
PSMB4-204ENST00000476467 AMPHP49418 695 aa17.75■□□□□ 0.43
PSMB4-204ENST00000476467 MRS2Q9HD23 443 aa17.75■□□□□ 0.43
PSMB4-204ENST00000476467 SPATA31A6Q5VVP1 1343 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 157.3 ms