RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 COG6Q9Y2V7 657 aa21.56■■□□□ 1.04
TVP23B-202ENST00000476139 NRXN3Q9Y4C0 1643 aa21.56■■□□□ 1.04
TVP23B-202ENST00000476139 DIAPH1O60610 1272 aaKnown RBP21.56■■□□□ 1.04
TVP23B-202ENST00000476139 DLC1Q96QB1 1528 aa21.56■■□□□ 1.04
TVP23B-202ENST00000476139 ZRANB1Q9UGI0 708 aa21.55■■□□□ 1.04
TVP23B-202ENST00000476139 COL3A1P02461 1466 aaPredicted RBP21.55■■□□□ 1.04
TVP23B-202ENST00000476139 MS4A1P11836 297 aa21.55■■□□□ 1.04
TVP23B-202ENST00000476139 TMPOP42166 694 aaKnown RBP21.55■■□□□ 1.04
TVP23B-202ENST00000476139 TSR2Q969E8 191 aaKnown RBP21.55■■□□□ 1.04
TVP23B-202ENST00000476139 TNNQ9UQP3 1299 aa21.55■■□□□ 1.04
TVP23B-202ENST00000476139 POLKQ9UBT6 870 aa21.54■■□□□ 1.04
TVP23B-202ENST00000476139 HDGFP51858 240 aaKnown RBP21.54■■□□□ 1.04
TVP23B-202ENST00000476139 MED14O60244 1454 aa21.54■■□□□ 1.04
TVP23B-202ENST00000476139 TRIM35Q9UPQ4 493 aa21.54■■□□□ 1.04
TVP23B-202ENST00000476139 NUDT16Q96DE0 195 aaKnown RBP21.53■■□□□ 1.04
TVP23B-202ENST00000476139 PDE3AQ14432 1141 aa21.53■■□□□ 1.04
TVP23B-202ENST00000476139 NME9Q86XW9 330 aa21.53■■□□□ 1.04
TVP23B-202ENST00000476139 LTKP29376 864 aa21.52■■□□□ 1.04
TVP23B-202ENST00000476139 TMEM2Q9UHN6 1383 aa21.52■■□□□ 1.04
TVP23B-202ENST00000476139 PPIP5K1Q6PFW1 1433 aa21.52■■□□□ 1.03
TVP23B-202ENST00000476139 PNPLA6Q8IY17 1366 aa21.52■■□□□ 1.03
TVP23B-202ENST00000476139 IGHDP01880 384 aa21.51■■□□□ 1.03
TVP23B-202ENST00000476139 MAPK8IP3Q9UPT6 1336 aa21.51■■□□□ 1.03
TVP23B-202ENST00000476139 BCL11AQ9H165 835 aa21.51■■□□□ 1.03
TVP23B-202ENST00000476139 MYH16Q9H6N6 1097 aa21.51■■□□□ 1.03
TVP23B-202ENST00000476139 RLBP1P12271 317 aa21.5■■□□□ 1.03
TVP23B-202ENST00000476139 RIPK4P57078 832 aa21.5■■□□□ 1.03
TVP23B-202ENST00000476139 CLUAP1Q96AJ1 413 aa21.5■■□□□ 1.03
TVP23B-202ENST00000476139 EMILIN1Q9Y6C2 1016 aa21.49■■□□□ 1.03
TVP23B-202ENST00000476139 NUTM2FA1L443 756 aa21.49■■□□□ 1.03
TVP23B-202ENST00000476139 CCDC61Q9Y6R9 512 aa21.49■■□□□ 1.03
TVP23B-202ENST00000476139 ATP7BP35670 1465 aa21.48■■□□□ 1.03
TVP23B-202ENST00000476139 CPSF1Q10570 1443 aaKnown RBP21.48■■□□□ 1.03
TVP23B-202ENST00000476139 NCBP3Q53F19 620 aaKnown RBP21.48■■□□□ 1.03
TVP23B-202ENST00000476139 SLC26A8Q96RN1 970 aa21.48■■□□□ 1.03
TVP23B-202ENST00000476139 ROBO2Q9HCK4 1378 aa21.47■■□□□ 1.03
TVP23B-202ENST00000476139 RGS3P49796 1198 aa21.47■■□□□ 1.03
TVP23B-202ENST00000476139 ADGRB2O60241 1585 aa21.47■■□□□ 1.03
TVP23B-202ENST00000476139 DEKP35659 375 aaKnown RBP21.47■■□□□ 1.03
TVP23B-202ENST00000476139 ANKRD26Q9UPS8 1709 aa21.46■■□□□ 1.03
TVP23B-202ENST00000476139 HMOX1P09601 288 aa21.46■■□□□ 1.03
TVP23B-202ENST00000476139 EXOSC9Q06265 439 aaKnown RBP21.46■■□□□ 1.03
TVP23B-202ENST00000476139 PRR36Q9H6K5 1346 aa21.46■■□□□ 1.03
TVP23B-202ENST00000476139 LAS1LQ9Y4W2 734 aaKnown RBP21.45■■□□□ 1.03
TVP23B-202ENST00000476139 PRKAR2BP31323 418 aa21.45■■□□□ 1.02
TVP23B-202ENST00000476139 RRS1Q15050 365 aaKnown RBP21.44■■□□□ 1.02
TVP23B-202ENST00000476139 SIRT1Q96EB6 747 aa21.44■■□□□ 1.02
TVP23B-202ENST00000476139 FCHSD2O94868 740 aa21.44■■□□□ 1.02
TVP23B-202ENST00000476139 PHACTR3Q96KR7 559 aa21.44■■□□□ 1.02
TVP23B-202ENST00000476139 FAM135BQ49AJ0 1406 aa21.44■■□□□ 1.02
TVP23B-202ENST00000476139 ADAMTS13Q76LX8 1427 aa21.44■■□□□ 1.02
TVP23B-202ENST00000476139 RSPH6AQ9H0K4 717 aa21.43■■□□□ 1.02
TVP23B-202ENST00000476139 EDC4Q6P2E9 1401 aaKnown RBP21.43■■□□□ 1.02
TVP23B-202ENST00000476139 KIF20BQ96Q89 1820 aa21.43■■□□□ 1.02
TVP23B-202ENST00000476139 TECPR2O15040 1411 aa21.42■■□□□ 1.02
TVP23B-202ENST00000476139 UBR1Q8IWV7 1749 aa21.42■■□□□ 1.02
TVP23B-202ENST00000476139 COG3Q96JB2 828 aa21.4■■□□□ 1.02
TVP23B-202ENST00000476139 PCDHB15Q9Y5E8 787 aa21.4■■□□□ 1.02
TVP23B-202ENST00000476139 CPS1P31327 1500 aa21.4■■□□□ 1.02
TVP23B-202ENST00000476139 PNNQ9H307 717 aaKnown RBP21.39■■□□□ 1.02
TVP23B-202ENST00000476139 IL13P35225 146 aa21.39■■□□□ 1.01
TVP23B-202ENST00000476139 SSH1Q8WYL5 1049 aa21.38■■□□□ 1.01
TVP23B-202ENST00000476139 THUMPD2Q9BTF0 503 aaKnown RBP21.38■■□□□ 1.01
TVP23B-202ENST00000476139 SMC4Q9NTJ3 1288 aa21.38■■□□□ 1.01
TVP23B-202ENST00000476139 MAP2P11137 1827 aaKnown RBP21.38■■□□□ 1.01
TVP23B-202ENST00000476139 SLC4A3P48751 1232 aa21.38■■□□□ 1.01
TVP23B-202ENST00000476139 C8orf34Q49A92 452 aa21.36■■□□□ 1.01
TVP23B-202ENST00000476139 ZNF692Q9BU19 519 aaPredicted RBP21.36■■□□□ 1.01
TVP23B-202ENST00000476139 PLEKHG1Q9ULL1 1385 aa21.36■■□□□ 1.01
TVP23B-202ENST00000476139 ZKSCAN2Q63HK3 967 aa21.36■■□□□ 1.01
TVP23B-202ENST00000476139 EID1Q9Y6B2 187 aa21.36■■□□□ 1.01
TVP23B-202ENST00000476139 LRRC7Q96NW7 1537 aa21.36■■□□□ 1.01
TVP23B-202ENST00000476139 RTL5Q5HYW3 569 aaPredicted RBP21.35■■□□□ 1.01
TVP23B-202ENST00000476139 ACEP12821 1306 aa21.35■■□□□ 1.01
TVP23B-202ENST00000476139 IL16Q14005 1332 aa21.35■■□□□ 1.01
TVP23B-202ENST00000476139 PTPRUQ92729 1446 aa21.34■■□□□ 1.01
TVP23B-202ENST00000476139 AMOTL2Q9Y2J4 779 aa21.34■■□□□ 1.01
TVP23B-202ENST00000476139 NEFMP07197 916 aa21.34■■□□□ 1.01
TVP23B-202ENST00000476139 FAM161AQ3B820 660 aa21.34■■□□□ 1.01
TVP23B-202ENST00000476139 CDC42BPGQ6DT37 1551 aa21.34■■□□□ 1.01
TVP23B-202ENST00000476139 TRIM27P14373 513 aa21.33■■□□□ 1.01
TVP23B-202ENST00000476139 FTSJ3Q8IY81 847 aaKnown RBP21.33■■□□□ 1.01
TVP23B-202ENST00000476139 DZIP1LQ8IYY4 767 aaKnown RBP21.33■■□□□ 1.01
TVP23B-202ENST00000476139 CT47B1P0C2W7 299 aaPredicted RBP21.33■■□□□ 1.01
TVP23B-202ENST00000476139 MVPQ14764 893 aaKnown RBP21.33■■□□□ 1
TVP23B-202ENST00000476139 NOB1Q9ULX3 412 aaKnown RBP21.33■■□□□ 1
TVP23B-202ENST00000476139 KNDC1Q76NI1 1749 aa21.32■■□□□ 1
TVP23B-202ENST00000476139 TRHP20396 242 aaPredicted RBP21.32■■□□□ 1
TVP23B-202ENST00000476139 NFE2L2Q16236 605 aa21.32■■□□□ 1
TVP23B-202ENST00000476139 AATKQ6ZMQ8 1374 aa21.32■■□□□ 1
TVP23B-202ENST00000476139 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.32■■□□□ 1
TVP23B-202ENST00000476139 TTC21BQ7Z4L5 1316 aa21.3■■□□□ 1
TVP23B-202ENST00000476139 SOX12O15370 315 aa21.3■■□□□ 1
TVP23B-202ENST00000476139 PMFBP1Q8TBY8 1022 aa21.3■■□□□ 1
TVP23B-202ENST00000476139 ATF7IPQ6VMQ6 1270 aa21.28■■□□□ 1
TVP23B-202ENST00000476139 PLEKHG3A1L390 1219 aa21.27■■□□□ 1
TVP23B-202ENST00000476139 FAM83GA6ND36 823 aa21.27■■□□□ 1
TVP23B-202ENST00000476139 CDK12Q9NYV4 1490 aaPredicted RBP21.27■■□□□ 1
TVP23B-202ENST00000476139 ELL2O00472 640 aaPredicted RBP21.27■■□□□ 1
TVP23B-202ENST00000476139 ITPRIPQ8IWB1 547 aa21.27■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms