RNA–Protein interactions for RNA: ENST00000475996.1

HLA-F-224, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 1,505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-224ENST00000475996 PAK3O75914 559 aaPredicted RBP17.53■□□□□ 0.4
HLA-F-224ENST00000475996 TTC21BQ7Z4L5 1316 aa17.53■□□□□ 0.4
HLA-F-224ENST00000475996 NHSL1Q5SYE7 1610 aa17.51■□□□□ 0.39
HLA-F-224ENST00000475996 SSH2Q76I76 1423 aa17.51■□□□□ 0.39
HLA-F-224ENST00000475996 AMER1Q5JTC6 1135 aaPredicted RBP17.51■□□□□ 0.39
HLA-F-224ENST00000475996 CC2D1BQ5T0F9 858 aaKnown RBP17.51■□□□□ 0.39
HLA-F-224ENST00000475996 CGNL1Q0VF96 1302 aa17.51■□□□□ 0.39
HLA-F-224ENST00000475996 TRPM3Q9HCF6 1732 aaPredicted RBP17.5■□□□□ 0.39
HLA-F-224ENST00000475996 KIF20BQ96Q89 1820 aa17.5■□□□□ 0.39
HLA-F-224ENST00000475996 NME9Q86XW9 330 aa17.5■□□□□ 0.39
HLA-F-224ENST00000475996 PXDNQ92626 1479 aa17.5■□□□□ 0.39
HLA-F-224ENST00000475996 GGNBP2Q9H3C7 697 aa17.49■□□□□ 0.39
HLA-F-224ENST00000475996 ZRANB1Q9UGI0 708 aa17.49■□□□□ 0.39
HLA-F-224ENST00000475996 FYB1O15117 783 aa17.48■□□□□ 0.39
HLA-F-224ENST00000475996 TTC21AQ8NDW8 1320 aa17.48■□□□□ 0.39
HLA-F-224ENST00000475996 BRD4O60885 1362 aaPredicted RBP17.47■□□□□ 0.39
HLA-F-224ENST00000475996 SOS2Q07890 1332 aaPredicted RBP17.47■□□□□ 0.39
HLA-F-224ENST00000475996 NUTM2GQ5VZR2 741 aa17.47■□□□□ 0.39
HLA-F-224ENST00000475996 LMOD2Q6P5Q4 547 aa17.47■□□□□ 0.39
HLA-F-224ENST00000475996 PIK3C2AO00443 1686 aa17.47■□□□□ 0.39
HLA-F-224ENST00000475996 AHDC1Q5TGY3 1603 aaPredicted RBP17.47■□□□□ 0.39
HLA-F-224ENST00000475996 ABTB2Q8N961 1025 aa17.47■□□□□ 0.39
HLA-F-224ENST00000475996 SBNO1A3KN83 1393 aa17.46■□□□□ 0.39
HLA-F-224ENST00000475996 PHLPP1O60346 1717 aa17.46■□□□□ 0.39
HLA-F-224ENST00000475996 PLEKHG5O94827 1062 aa17.45■□□□□ 0.38
HLA-F-224ENST00000475996 TNS3Q68CZ2 1445 aa17.44■□□□□ 0.38
HLA-F-224ENST00000475996 ALS2Q96Q42 1657 aa17.44■□□□□ 0.38
HLA-F-224ENST00000475996 NPC1L1Q9UHC9 1359 aa17.44■□□□□ 0.38
HLA-F-224ENST00000475996 ANP32CO43423 234 aa17.44■□□□□ 0.38
HLA-F-224ENST00000475996 NLRP6P59044 892 aa17.44■□□□□ 0.38
HLA-F-224ENST00000475996 ANKRD26Q9UPS8 1709 aa17.44■□□□□ 0.38
HLA-F-224ENST00000475996 NSD2O96028 1365 aa17.44■□□□□ 0.38
HLA-F-224ENST00000475996 SPATA31A3Q5VYP0 1347 aa17.43■□□□□ 0.38
HLA-F-224ENST00000475996 COG3Q96JB2 828 aa17.43■□□□□ 0.38
HLA-F-224ENST00000475996 MORC1Q86VD1 984 aa17.42■□□□□ 0.38
HLA-F-224ENST00000475996 TNNT2P45379 298 aaPredicted RBP17.42■□□□□ 0.38
HLA-F-224ENST00000475996 PRKRIP1Q9H875 184 aaPredicted RBP17.42■□□□□ 0.38
HLA-F-224ENST00000475996 OVOS2A0A0J9YW53 1432 aa17.41■□□□□ 0.38
HLA-F-224ENST00000475996 OVOS2Q6IE36 1432 aa17.41■□□□□ 0.38
HLA-F-224ENST00000475996 COL16A1Q07092 1604 aaPredicted RBP17.41■□□□□ 0.38
HLA-F-224ENST00000475996 MARF1Q9Y4F3 1742 aaKnown RBP17.41■□□□□ 0.38
HLA-F-224ENST00000475996 USP31Q70CQ4 1352 aa17.4■□□□□ 0.38
HLA-F-224ENST00000475996 SOX12O15370 315 aa17.4■□□□□ 0.38
HLA-F-224ENST00000475996 PARD3Q8TEW0 1356 aa17.4■□□□□ 0.38
HLA-F-224ENST00000475996 NLRP13Q86W25 1043 aa17.39■□□□□ 0.37
HLA-F-224ENST00000475996 LRRC59Q96AG4 307 aaKnown RBP17.39■□□□□ 0.37
HLA-F-224ENST00000475996 ARHGEF10O15013 1369 aa17.39■□□□□ 0.37
HLA-F-224ENST00000475996 FBLN1P23142 703 aa17.38■□□□□ 0.37
HLA-F-224ENST00000475996 USP54Q70EL1 1684 aa17.38■□□□□ 0.37
HLA-F-224ENST00000475996 RALBP1Q15311 655 aa17.37■□□□□ 0.37
HLA-F-224ENST00000475996 MIER1Q8N108 512 aa17.37■□□□□ 0.37
HLA-F-224ENST00000475996 CABLES1Q8TDN4 633 aa17.37■□□□□ 0.37
HLA-F-224ENST00000475996 HSPA1LP34931 641 aa17.36■□□□□ 0.37
HLA-F-224ENST00000475996 MED1Q15648 1581 aaPredicted RBP17.35■□□□□ 0.37
HLA-F-224ENST00000475996 USP19O94966 1318 aa17.35■□□□□ 0.37
HLA-F-224ENST00000475996 PNPLA6Q8IY17 1366 aa17.34■□□□□ 0.37
HLA-F-224ENST00000475996 MYBBP1AQ9BQG0 1328 aaKnown RBP17.34■□□□□ 0.37
HLA-F-224ENST00000475996 MAP2P11137 1827 aaKnown RBP17.34■□□□□ 0.37
HLA-F-224ENST00000475996 SLIT3O75094 1523 aa17.34■□□□□ 0.37
HLA-F-224ENST00000475996 PPP2R1AP30153 589 aa17.33■□□□□ 0.37
HLA-F-224ENST00000475996 PHRF1Q9P1Y6 1649 aaKnown RBP17.33■□□□□ 0.37
HLA-F-224ENST00000475996 CRYBG1Q9Y4K1 1723 aa17.33■□□□□ 0.36
HLA-F-224ENST00000475996 GCP02774 474 aa17.32■□□□□ 0.36
HLA-F-224ENST00000475996 RRS1Q15050 365 aaKnown RBP17.32■□□□□ 0.36
HLA-F-224ENST00000475996 ABCA3Q99758 1704 aa17.31■□□□□ 0.36
HLA-F-224ENST00000475996 NFAT5O94916 1531 aa17.31■□□□□ 0.36
HLA-F-224ENST00000475996 ZBTB7CA1YPR0 619 aa17.31■□□□□ 0.36
HLA-F-224ENST00000475996 HAP1P54257 671 aaPredicted RBP17.31■□□□□ 0.36
HLA-F-224ENST00000475996 KCNH5Q8NCM2 988 aa17.31■□□□□ 0.36
HLA-F-224ENST00000475996 COL22A1Q8NFW1 1626 aaPredicted RBP17.3■□□□□ 0.36
HLA-F-224ENST00000475996 ZC3H6P61129 1189 aaKnown RBP17.3■□□□□ 0.36
HLA-F-224ENST00000475996 FBXO41Q8TF61 875 aa17.3■□□□□ 0.36
HLA-F-224ENST00000475996 POLKQ9UBT6 870 aa17.3■□□□□ 0.36
HLA-F-224ENST00000475996 EMILIN1Q9Y6C2 1016 aa17.3■□□□□ 0.36
HLA-F-224ENST00000475996 AATKQ6ZMQ8 1374 aa17.3■□□□□ 0.36
HLA-F-224ENST00000475996 SHPRHQ149N8 1683 aa17.29■□□□□ 0.36
HLA-F-224ENST00000475996 PPM1GO15355 546 aaPredicted RBP17.29■□□□□ 0.36
HLA-F-224ENST00000475996 JCADQ9P266 1359 aa17.29■□□□□ 0.36
HLA-F-224ENST00000475996 MTHFSP49914 203 aa17.28■□□□□ 0.36
HLA-F-224ENST00000475996 MAP3K19Q56UN5 1328 aa17.28■□□□□ 0.36
HLA-F-224ENST00000475996 LTN1O94822 1766 aa17.28■□□□□ 0.36
HLA-F-224ENST00000475996 CCDC184Q52MB2 194 aa17.27■□□□□ 0.36
HLA-F-224ENST00000475996 NUTM2BA6NNL0 878 aaPredicted RBP17.26■□□□□ 0.35
HLA-F-224ENST00000475996 NUTM2EB1AL46 878 aaPredicted RBP17.26■□□□□ 0.35
HLA-F-224ENST00000475996 NUTM2AQ8IVF1 878 aaPredicted RBP17.26■□□□□ 0.35
HLA-F-224ENST00000475996 PEAK1Q9H792 1746 aa17.26■□□□□ 0.35
HLA-F-224ENST00000475996 KIAA0232Q92628 1395 aa17.25■□□□□ 0.35
HLA-F-224ENST00000475996 AMPHP49418 695 aa17.25■□□□□ 0.35
HLA-F-224ENST00000475996 ARHGEF25Q86VW2 580 aa17.25■□□□□ 0.35
HLA-F-224ENST00000475996 SMG6Q86US8 1419 aaKnown RBP17.24■□□□□ 0.35
HLA-F-224ENST00000475996 CHRNA2Q15822 529 aa17.24■□□□□ 0.35
HLA-F-224ENST00000475996 MRS2Q9HD23 443 aa17.23■□□□□ 0.35
HLA-F-224ENST00000475996 CCER2I3L3R5 266 aa17.22■□□□□ 0.35
HLA-F-224ENST00000475996 ADAMTS2O95450 1211 aa17.22■□□□□ 0.35
HLA-F-224ENST00000475996 PRDM11Q9NQV5 511 aa17.22■□□□□ 0.35
HLA-F-224ENST00000475996 HOXC9P31274 260 aa17.21■□□□□ 0.35
HLA-F-224ENST00000475996 CPDO75976 1380 aa17.21■□□□□ 0.35
HLA-F-224ENST00000475996 FLT4P35916 1363 aa17.21■□□□□ 0.35
HLA-F-224ENST00000475996 CDK12Q9NYV4 1490 aaPredicted RBP17.21■□□□□ 0.35
HLA-F-224ENST00000475996 HSP90AB2PQ58FF8 381 aa17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms