RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 PARD3Q8TEW0 1356 aa16.54■□□□□ 0.24
MRPL55-227ENST00000475832 QTRT2Q9H974 415 aaKnown RBP16.54■□□□□ 0.24
MRPL55-227ENST00000475832 CABP1Q9NZU7 370 aa16.54■□□□□ 0.24
MRPL55-227ENST00000475832 ATP7BP35670 1465 aa16.54■□□□□ 0.24
MRPL55-227ENST00000475832 FMN2Q9NZ56 1722 aa16.53■□□□□ 0.24
MRPL55-227ENST00000475832 AMER1Q5JTC6 1135 aaPredicted RBP16.53■□□□□ 0.24
MRPL55-227ENST00000475832 NLRP13Q86W25 1043 aa16.53■□□□□ 0.24
MRPL55-227ENST00000475832 YTHDC1Q96MU7 727 aaKnown RBP16.53■□□□□ 0.24
MRPL55-227ENST00000475832 ORAI2Q96SN7 254 aa16.53■□□□□ 0.24
MRPL55-227ENST00000475832 CARD14Q9BXL6 1004 aa16.53■□□□□ 0.24
MRPL55-227ENST00000475832 PPIP5K1Q6PFW1 1433 aa16.53■□□□□ 0.24
MRPL55-227ENST00000475832 NSD2O96028 1365 aa16.52■□□□□ 0.24
MRPL55-227ENST00000475832 ZNF692Q9BU19 519 aaPredicted RBP16.52■□□□□ 0.24
MRPL55-227ENST00000475832 RGS12O14924 1447 aa16.52■□□□□ 0.23
MRPL55-227ENST00000475832 CENPBP07199 599 aaPredicted RBP16.51■□□□□ 0.23
MRPL55-227ENST00000475832 A0A1W2PP64 1363 aa16.51■□□□□ 0.23
MRPL55-227ENST00000475832 BRD4O60885 1362 aaPredicted RBP16.51■□□□□ 0.23
MRPL55-227ENST00000475832 ANKARQ7Z5J8 1434 aa16.5■□□□□ 0.23
MRPL55-227ENST00000475832 SOS2Q07890 1332 aaPredicted RBP16.49■□□□□ 0.23
MRPL55-227ENST00000475832 ESCO1Q5FWF5 840 aa16.49■□□□□ 0.23
MRPL55-227ENST00000475832 MORC1Q86VD1 984 aa16.49■□□□□ 0.23
MRPL55-227ENST00000475832 DDX17Q92841 729 aaKnown RBP16.49■□□□□ 0.23
MRPL55-227ENST00000475832 NGLY1Q96IV0 654 aa16.49■□□□□ 0.23
MRPL55-227ENST00000475832 C8orf37Q96NL8 207 aa16.49■□□□□ 0.23
MRPL55-227ENST00000475832 SHPRHQ149N8 1683 aa16.48■□□□□ 0.23
MRPL55-227ENST00000475832 PLEKHG3A1L390 1219 aa16.47■□□□□ 0.23
MRPL55-227ENST00000475832 LRRC59Q96AG4 307 aaKnown RBP16.47■□□□□ 0.23
MRPL55-227ENST00000475832 USP32Q8NFA0 1604 aa16.47■□□□□ 0.23
MRPL55-227ENST00000475832 NPHP3Q7Z494 1330 aa16.46■□□□□ 0.23
MRPL55-227ENST00000475832 NUTM2FA1L443 756 aa16.46■□□□□ 0.23
MRPL55-227ENST00000475832 PXDNQ92626 1479 aa16.46■□□□□ 0.23
MRPL55-227ENST00000475832 PRR36Q9H6K5 1346 aa16.45■□□□□ 0.22
MRPL55-227ENST00000475832 KIF1AQ12756 1690 aa16.45■□□□□ 0.22
MRPL55-227ENST00000475832 EDC4Q6P2E9 1401 aaKnown RBP16.45■□□□□ 0.22
MRPL55-227ENST00000475832 PPP2R1AP30153 589 aa16.44■□□□□ 0.22
MRPL55-227ENST00000475832 NGDNQ8NEJ9 315 aaKnown RBP16.44■□□□□ 0.22
MRPL55-227ENST00000475832 CPSF1Q10570 1443 aaKnown RBP16.44■□□□□ 0.22
MRPL55-227ENST00000475832 CD163L1Q9NR16 1453 aa16.43■□□□□ 0.22
MRPL55-227ENST00000475832 FOXO3O43524 673 aa16.43■□□□□ 0.22
MRPL55-227ENST00000475832 FAM9BQ8IZU0 186 aa16.43■□□□□ 0.22
MRPL55-227ENST00000475832 RGPD8O14715 1765 aaPredicted RBP16.43■□□□□ 0.22
MRPL55-227ENST00000475832 PNPLA6Q8IY17 1366 aa16.42■□□□□ 0.22
MRPL55-227ENST00000475832 CCDC125Q86Z20 511 aa16.42■□□□□ 0.22
MRPL55-227ENST00000475832 PHF8Q9UPP1 1060 aa16.42■□□□□ 0.22
MRPL55-227ENST00000475832 ACEP12821 1306 aa16.42■□□□□ 0.22
MRPL55-227ENST00000475832 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.41■□□□□ 0.22
MRPL55-227ENST00000475832 ITSN1Q15811 1721 aa16.4■□□□□ 0.22
MRPL55-227ENST00000475832 CCDC184Q52MB2 194 aa16.4■□□□□ 0.22
MRPL55-227ENST00000475832 CFAP53Q96M91 514 aa16.4■□□□□ 0.22
MRPL55-227ENST00000475832 FYB1O15117 783 aa16.39■□□□□ 0.21
MRPL55-227ENST00000475832 GGNBP2Q9H3C7 697 aa16.39■□□□□ 0.21
MRPL55-227ENST00000475832 TOPAZ1Q8N9V7 1692 aa16.39■□□□□ 0.21
MRPL55-227ENST00000475832 COL22A1Q8NFW1 1626 aaPredicted RBP16.38■□□□□ 0.21
MRPL55-227ENST00000475832 WDR43Q15061 677 aaKnown RBP eCLIP16.38■□□□□ 0.21
MRPL55-227ENST00000475832 PMFBP1Q8TBY8 1022 aa16.38■□□□□ 0.21
MRPL55-227ENST00000475832 PNISRQ8TF01 805 aaKnown RBP16.38■□□□□ 0.21
MRPL55-227ENST00000475832 POLR3AO14802 1390 aaPredicted RBP16.38■□□□□ 0.21
MRPL55-227ENST00000475832 COG3Q96JB2 828 aa16.37■□□□□ 0.21
MRPL55-227ENST00000475832 TTC21AQ8NDW8 1320 aa16.37■□□□□ 0.21
MRPL55-227ENST00000475832 USP6P35125 1406 aa16.36■□□□□ 0.21
MRPL55-227ENST00000475832 ADAMTS2O95450 1211 aa16.36■□□□□ 0.21
MRPL55-227ENST00000475832 TNNT2P45379 298 aaPredicted RBP16.36■□□□□ 0.21
MRPL55-227ENST00000475832 XPCQ01831 940 aaPredicted RBP16.36■□□□□ 0.21
MRPL55-227ENST00000475832 KRT28Q7Z3Y7 464 aa16.36■□□□□ 0.21
MRPL55-227ENST00000475832 SPATA31A3Q5VYP0 1347 aa16.36■□□□□ 0.21
MRPL55-227ENST00000475832 TTC21BQ7Z4L5 1316 aa16.36■□□□□ 0.21
MRPL55-227ENST00000475832 SBNO1A3KN83 1393 aa16.36■□□□□ 0.21
MRPL55-227ENST00000475832 TRPC5Q9UL62 973 aaPredicted RBP16.35■□□□□ 0.21
MRPL55-227ENST00000475832 HNRNPUQ00839 825 aaKnown RBP eCLIP16.34■□□□□ 0.21
MRPL55-227ENST00000475832 PSME1Q06323 249 aa16.34■□□□□ 0.21
MRPL55-227ENST00000475832 USP21Q9UK80 565 aa16.34■□□□□ 0.21
MRPL55-227ENST00000475832 TNS3Q68CZ2 1445 aa16.33■□□□□ 0.2
MRPL55-227ENST00000475832 MON2Q7Z3U7 1717 aa16.33■□□□□ 0.2
MRPL55-227ENST00000475832 AKAP12Q02952 1782 aa16.33■□□□□ 0.2
MRPL55-227ENST00000475832 NME9Q86XW9 330 aa16.32■□□□□ 0.2
MRPL55-227ENST00000475832 TRPM3Q9HCF6 1732 aaPredicted RBP16.32■□□□□ 0.2
MRPL55-227ENST00000475832 INSRP06213 1382 aa16.31■□□□□ 0.2
MRPL55-227ENST00000475832 MTHFSP49914 203 aa16.31■□□□□ 0.2
MRPL55-227ENST00000475832 KIF20BQ96Q89 1820 aa16.31■□□□□ 0.2
MRPL55-227ENST00000475832 NUDCQ9Y266 331 aa16.3■□□□□ 0.2
MRPL55-227ENST00000475832 ANKRD26Q9UPS8 1709 aa16.3■□□□□ 0.2
MRPL55-227ENST00000475832 ARHGEF10O15013 1369 aa16.29■□□□□ 0.2
MRPL55-227ENST00000475832 PAK3O75914 559 aaPredicted RBP16.29■□□□□ 0.2
MRPL55-227ENST00000475832 SSH2Q76I76 1423 aa16.28■□□□□ 0.2
MRPL55-227ENST00000475832 ALS2Q96Q42 1657 aa16.28■□□□□ 0.2
MRPL55-227ENST00000475832 AATKQ6ZMQ8 1374 aa16.27■□□□□ 0.2
MRPL55-227ENST00000475832 SF3B2Q13435 895 aaKnown RBP16.26■□□□□ 0.19
MRPL55-227ENST00000475832 ABTB2Q8N961 1025 aa16.26■□□□□ 0.19
MRPL55-227ENST00000475832 NRKQ7Z2Y5 1582 aa16.26■□□□□ 0.19
MRPL55-227ENST00000475832 USP31Q70CQ4 1352 aa16.26■□□□□ 0.19
MRPL55-227ENST00000475832 NLRP6P59044 892 aa16.25■□□□□ 0.19
MRPL55-227ENST00000475832 PPM1GO15355 546 aaPredicted RBP16.24■□□□□ 0.19
MRPL55-227ENST00000475832 FNBP4Q8N3X1 1017 aaPredicted RBP16.24■□□□□ 0.19
MRPL55-227ENST00000475832 EP400Q96L91 3159 aa16.24■□□□□ 0.19
MRPL55-227ENST00000475832 LRP5O75197 1615 aa16.23■□□□□ 0.19
MRPL55-227ENST00000475832 ZBED9Q6R2W3 1325 aa16.23■□□□□ 0.19
MRPL55-227ENST00000475832 OVOS2A0A0J9YW53 1432 aa16.23■□□□□ 0.19
MRPL55-227ENST00000475832 OVOS2Q6IE36 1432 aa16.23■□□□□ 0.19
MRPL55-227ENST00000475832 DEFB132Q7Z7B7 95 aa16.23■□□□□ 0.19
MRPL55-227ENST00000475832 PNNQ9H307 717 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms