RNA–Protein interactions for RNA: ENST00000475819.1

LMNB2-202, Transcript of lamin B2, humanhuman

TSL 5

Gene LMNB2, Length 885 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-202ENST00000475819 DEFB132Q7Z7B7 95 aa24.07■■□□□ 1.44
LMNB2-202ENST00000475819 KDM2AQ9Y2K7 1162 aa24.07■■□□□ 1.44
LMNB2-202ENST00000475819 ALS2Q96Q42 1657 aa24.07■■□□□ 1.44
LMNB2-202ENST00000475819 COL14A1Q05707 1796 aaKnown RBP24.06■■□□□ 1.44
LMNB2-202ENST00000475819 KRT27Q7Z3Y8 459 aa24.06■■□□□ 1.44
LMNB2-202ENST00000475819 ITSN1Q15811 1721 aa24.05■■□□□ 1.44
LMNB2-202ENST00000475819 PAK3O75914 559 aaPredicted RBP24.03■■□□□ 1.44
LMNB2-202ENST00000475819 DCAF11Q8TEB1 546 aa24.03■■□□□ 1.44
LMNB2-202ENST00000475819 L3MBTL2Q969R5 705 aa24.03■■□□□ 1.44
LMNB2-202ENST00000475819 BTG4Q9NY30 223 aa24.03■■□□□ 1.44
LMNB2-202ENST00000475819 FAM83GA6ND36 823 aa24.02■■□□□ 1.44
LMNB2-202ENST00000475819 FAM98CQ17RN3 349 aaKnown RBP24.02■■□□□ 1.44
LMNB2-202ENST00000475819 NGDNQ8NEJ9 315 aaKnown RBP24.02■■□□□ 1.44
LMNB2-202ENST00000475819 ARHGEF28Q8N1W1 1705 aaKnown RBP24.01■■□□□ 1.43
LMNB2-202ENST00000475819 PRR36Q9H6K5 1346 aa24■■□□□ 1.43
LMNB2-202ENST00000475819 CRYBG1Q9Y4K1 1723 aa23.98■■□□□ 1.43
LMNB2-202ENST00000475819 WASLO00401 505 aaPredicted RBP23.98■■□□□ 1.43
LMNB2-202ENST00000475819 STAC3Q96MF2 364 aa23.98■■□□□ 1.43
LMNB2-202ENST00000475819 RGPD1P0DJD0 1748 aa23.98■■□□□ 1.43
LMNB2-202ENST00000475819 BAG6P46379 1132 aa23.97■■□□□ 1.43
LMNB2-202ENST00000475819 PRDM11Q9NQV5 511 aa23.96■■□□□ 1.43
LMNB2-202ENST00000475819 ONECUT3O60422 494 aaPredicted RBP23.95■■□□□ 1.42
LMNB2-202ENST00000475819 KIAA1210Q9ULL0 1709 aa23.95■■□□□ 1.42
LMNB2-202ENST00000475819 PHRF1Q9P1Y6 1649 aaKnown RBP23.95■■□□□ 1.42
LMNB2-202ENST00000475819 ATP7BP35670 1465 aa23.94■■□□□ 1.42
LMNB2-202ENST00000475819 TRPM1Q7Z4N2 1603 aa23.94■■□□□ 1.42
LMNB2-202ENST00000475819 LRP5O75197 1615 aa23.92■■□□□ 1.42
LMNB2-202ENST00000475819 THSD7AQ9UPZ6 1657 aa23.9■■□□□ 1.42
LMNB2-202ENST00000475819 PSDA5PKW4 1024 aaPredicted RBP23.9■■□□□ 1.42
LMNB2-202ENST00000475819 SPATA31A5Q5VU36 1347 aa23.89■■□□□ 1.42
LMNB2-202ENST00000475819 SPATA31A7Q8IWB4 1347 aa23.89■■□□□ 1.42
LMNB2-202ENST00000475819 FAM182BQ5T319 152 aa23.89■■□□□ 1.41
LMNB2-202ENST00000475819 KIAA0232Q92628 1395 aa23.89■■□□□ 1.41
LMNB2-202ENST00000475819 TOPAZ1Q8N9V7 1692 aa23.89■■□□□ 1.41
LMNB2-202ENST00000475819 NUDT16Q96DE0 195 aaKnown RBP23.88■■□□□ 1.41
LMNB2-202ENST00000475819 STRN4Q9NRL3 753 aa23.88■■□□□ 1.41
LMNB2-202ENST00000475819 TNS1Q9HBL0 1735 aaKnown RBP23.87■■□□□ 1.41
LMNB2-202ENST00000475819 CHRNA2Q15822 529 aa23.86■■□□□ 1.41
LMNB2-202ENST00000475819 NUTM2GQ5VZR2 741 aa23.86■■□□□ 1.41
LMNB2-202ENST00000475819 EN1Q05925 392 aaPredicted RBP23.85■■□□□ 1.41
LMNB2-202ENST00000475819 ZC3H6P61129 1189 aaKnown RBP23.83■■□□□ 1.41
LMNB2-202ENST00000475819 USP35Q9P2H5 1018 aa23.83■■□□□ 1.41
LMNB2-202ENST00000475819 NRKQ7Z2Y5 1582 aa23.82■■□□□ 1.4
LMNB2-202ENST00000475819 CDK19Q9BWU1 502 aa23.82■■□□□ 1.4
LMNB2-202ENST00000475819 SPATA31A1Q5TZJ5 1347 aa23.81■■□□□ 1.4
LMNB2-202ENST00000475819 NBPF8Q3BBV2 869 aa23.8■■□□□ 1.4
LMNB2-202ENST00000475819 EVA1CP58658 441 aa23.79■■□□□ 1.4
LMNB2-202ENST00000475819 ACEP12821 1306 aa23.79■■□□□ 1.4
LMNB2-202ENST00000475819 POLR3AO14802 1390 aaPredicted RBP23.78■■□□□ 1.4
LMNB2-202ENST00000475819 SSH2Q76I76 1423 aa23.77■■□□□ 1.4
LMNB2-202ENST00000475819 R3HDM1Q15032 1099 aaKnown RBP23.77■■□□□ 1.4
LMNB2-202ENST00000475819 DISP2A7MBM2 1401 aa23.76■■□□□ 1.39
LMNB2-202ENST00000475819 SRPK2P78362 688 aaKnown RBP23.76■■□□□ 1.39
LMNB2-202ENST00000475819 ABTB2Q8N961 1025 aa23.76■■□□□ 1.39
LMNB2-202ENST00000475819 CCDC61Q9Y6R9 512 aa23.76■■□□□ 1.39
LMNB2-202ENST00000475819 TRIM37O94972 964 aa23.75■■□□□ 1.39
LMNB2-202ENST00000475819 QRICH2Q9H0J4 1663 aa23.75■■□□□ 1.39
LMNB2-202ENST00000475819 PDE3BQ13370 1112 aa23.74■■□□□ 1.39
LMNB2-202ENST00000475819 FAM196AQ6ZSG2 479 aa23.74■■□□□ 1.39
LMNB2-202ENST00000475819 PPIP5K1Q6PFW1 1433 aa23.74■■□□□ 1.39
LMNB2-202ENST00000475819 ZBTB7CA1YPR0 619 aa23.73■■□□□ 1.39
LMNB2-202ENST00000475819 EZH2Q15910 746 aaKnown RBP23.73■■□□□ 1.39
LMNB2-202ENST00000475819 ROCK2O75116 1388 aaKnown RBP23.73■■□□□ 1.39
LMNB2-202ENST00000475819 LMO7Q8WWI1 1683 aa23.71■■□□□ 1.39
LMNB2-202ENST00000475819 APBA3O96018 575 aa23.71■■□□□ 1.39
LMNB2-202ENST00000475819 CAMTA1Q9Y6Y1 1673 aa23.7■■□□□ 1.39
LMNB2-202ENST00000475819 CENPJQ9HC77 1338 aaPredicted RBP23.69■■□□□ 1.38
LMNB2-202ENST00000475819 LARP1Q6PKG0 1096 aaKnown RBP23.69■■□□□ 1.38
LMNB2-202ENST00000475819 PLEKHG3A1L390 1219 aa23.68■■□□□ 1.38
LMNB2-202ENST00000475819 NBPF1Q3BBV0 1214 aa23.68■■□□□ 1.38
LMNB2-202ENST00000475819 NLRP13Q86W25 1043 aa23.68■■□□□ 1.38
LMNB2-202ENST00000475819 TCP11L2Q8N4U5 519 aa23.68■■□□□ 1.38
LMNB2-202ENST00000475819 CPDO75976 1380 aa23.67■■□□□ 1.38
LMNB2-202ENST00000475819 PARD3Q8TEW0 1356 aa23.67■■□□□ 1.38
LMNB2-202ENST00000475819 RREB1Q92766 1687 aa23.67■■□□□ 1.38
LMNB2-202ENST00000475819 USP19O94966 1318 aa23.67■■□□□ 1.38
LMNB2-202ENST00000475819 BARGINQ6ZT62 677 aa23.67■■□□□ 1.38
LMNB2-202ENST00000475819 CABP2Q9NPB3 220 aa23.67■■□□□ 1.38
LMNB2-202ENST00000475819 NUP188Q5SRE5 1749 aa23.66■■□□□ 1.38
LMNB2-202ENST00000475819 PARP4Q9UKK3 1724 aaKnown RBP23.65■■□□□ 1.38
LMNB2-202ENST00000475819 COL5A2P05997 1499 aaPredicted RBP23.65■■□□□ 1.38
LMNB2-202ENST00000475819 CARD11Q9BXL7 1154 aa23.65■■□□□ 1.38
LMNB2-202ENST00000475819 GCP02774 474 aa23.63■■□□□ 1.37
LMNB2-202ENST00000475819 CAMKK2Q96RR4 588 aa23.63■■□□□ 1.37
LMNB2-202ENST00000475819 EIF4G2P78344 907 aaKnown RBP eCLIP23.62■■□□□ 1.37
LMNB2-202ENST00000475819 USP47Q96K76 1375 aa23.62■■□□□ 1.37
LMNB2-202ENST00000475819 USP6P35125 1406 aa23.61■■□□□ 1.37
LMNB2-202ENST00000475819 THRAP3Q9Y2W1 955 aaKnown RBP23.61■■□□□ 1.37
LMNB2-202ENST00000475819 CRB1P82279 1406 aa23.6■■□□□ 1.37
LMNB2-202ENST00000475819 LRRC37A3O60309 1634 aa23.6■■□□□ 1.37
LMNB2-202ENST00000475819 NLRP6P59044 892 aa23.59■■□□□ 1.37
LMNB2-202ENST00000475819 NBPF14Q5TI25 921 aa23.59■■□□□ 1.37
LMNB2-202ENST00000475819 BRD4O60885 1362 aaPredicted RBP23.59■■□□□ 1.37
LMNB2-202ENST00000475819 OVOS2A0A0G2JMS6 1433 aa23.59■■□□□ 1.37
LMNB2-202ENST00000475819 OVOS2A0A0J9YW53 1432 aa23.59■■□□□ 1.37
LMNB2-202ENST00000475819 OVOS2Q6IE36 1432 aa23.59■■□□□ 1.37
LMNB2-202ENST00000475819 PIK3C2AO00443 1686 aa23.58■■□□□ 1.37
LMNB2-202ENST00000475819 WNK3Q9BYP7 1800 aa23.57■■□□□ 1.36
LMNB2-202ENST00000475819 CABP1Q9NZU7 370 aa23.57■■□□□ 1.36
LMNB2-202ENST00000475819 SLIT3O75094 1523 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms