RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 EIF4G2P78344 907 aaKnown RBP eCLIP21.21■□□□□ 0.99
SNX13-207ENST00000475800 NGDNQ8NEJ9 315 aaKnown RBP21.21■□□□□ 0.99
SNX13-207ENST00000475800 PPIP5K1Q6PFW1 1433 aa21.21■□□□□ 0.99
SNX13-207ENST00000475800 CABLES1Q8TDN4 633 aa21.2■□□□□ 0.98
SNX13-207ENST00000475800 ATRNO75882 1429 aa21.2■□□□□ 0.98
SNX13-207ENST00000475800 TMF1P82094 1093 aa21.19■□□□□ 0.98
SNX13-207ENST00000475800 POLR3AO14802 1390 aaPredicted RBP21.19■□□□□ 0.98
SNX13-207ENST00000475800 SPATA31A3Q5VYP0 1347 aa21.18■□□□□ 0.98
SNX13-207ENST00000475800 SBNO1A3KN83 1393 aa21.18■□□□□ 0.98
SNX13-207ENST00000475800 BCL9LQ86UU0 1499 aa21.18■□□□□ 0.98
SNX13-207ENST00000475800 MARF1Q9Y4F3 1742 aaKnown RBP21.18■□□□□ 0.98
SNX13-207ENST00000475800 CDCA8Q53HL2 280 aa21.17■□□□□ 0.98
SNX13-207ENST00000475800 TRPM3Q9HCF6 1732 aaPredicted RBP21.15■□□□□ 0.98
SNX13-207ENST00000475800 ACEP12821 1306 aa21.15■□□□□ 0.98
SNX13-207ENST00000475800 TNS3Q68CZ2 1445 aa21.14■□□□□ 0.98
SNX13-207ENST00000475800 BRD4O60885 1362 aaPredicted RBP21.14■□□□□ 0.98
SNX13-207ENST00000475800 NINLQ9Y2I6 1382 aa21.14■□□□□ 0.98
SNX13-207ENST00000475800 GJD4Q96KN9 370 aaPredicted RBP21.14■□□□□ 0.97
SNX13-207ENST00000475800 CABP1Q9NZU7 370 aa21.14■□□□□ 0.97
SNX13-207ENST00000475800 ARHGEF10O15013 1369 aa21.13■□□□□ 0.97
SNX13-207ENST00000475800 HSPA5P11021 654 aaKnown RBP21.13■□□□□ 0.97
SNX13-207ENST00000475800 CCDC9Q9Y3X0 531 aaKnown RBP21.12■□□□□ 0.97
SNX13-207ENST00000475800 AKAP12Q02952 1782 aa21.12■□□□□ 0.97
SNX13-207ENST00000475800 UNC5CLQ8IV45 518 aa21.11■□□□□ 0.97
SNX13-207ENST00000475800 ZNF692Q9BU19 519 aaPredicted RBP21.11■□□□□ 0.97
SNX13-207ENST00000475800 ALS2Q96Q42 1657 aa21.11■□□□□ 0.97
SNX13-207ENST00000475800 USP6P35125 1406 aa21.08■□□□□ 0.97
SNX13-207ENST00000475800 TMC1Q8TDI8 760 aa21.08■□□□□ 0.97
SNX13-207ENST00000475800 EP400Q96L91 3159 aa21.07■□□□□ 0.96
SNX13-207ENST00000475800 MON2Q7Z3U7 1717 aa21.07■□□□□ 0.96
SNX13-207ENST00000475800 CPSF1Q10570 1443 aaKnown RBP21.06■□□□□ 0.96
SNX13-207ENST00000475800 SLIT2O94813 1529 aa21.06■□□□□ 0.96
SNX13-207ENST00000475800 PAK3O75914 559 aaPredicted RBP21.06■□□□□ 0.96
SNX13-207ENST00000475800 ZEB1P37275 1124 aaPredicted RBP21.06■□□□□ 0.96
SNX13-207ENST00000475800 TERF2IPQ9NYB0 399 aa21.06■□□□□ 0.96
SNX13-207ENST00000475800 GLI3P10071 1580 aa21.06■□□□□ 0.96
SNX13-207ENST00000475800 A0A0G2JS52 829 aa21.05■□□□□ 0.96
SNX13-207ENST00000475800 MYT1Q01538 1121 aa21.05■□□□□ 0.96
SNX13-207ENST00000475800 HDGFL2Q7Z4V5 671 aaPredicted RBP21.05■□□□□ 0.96
SNX13-207ENST00000475800 SLC12A5Q9H2X9 1139 aa21.04■□□□□ 0.96
SNX13-207ENST00000475800 KTN1Q86UP2 1357 aaKnown RBP21.04■□□□□ 0.96
SNX13-207ENST00000475800 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.03■□□□□ 0.96
SNX13-207ENST00000475800 SEPT12Q8IYM1 358 aa21.02■□□□□ 0.96
SNX13-207ENST00000475800 SSH2Q76I76 1423 aa21.02■□□□□ 0.96
SNX13-207ENST00000475800 NRKQ7Z2Y5 1582 aa21.02■□□□□ 0.95
SNX13-207ENST00000475800 CD163L1Q9NR16 1453 aa21.01■□□□□ 0.95
SNX13-207ENST00000475800 ABCA3Q99758 1704 aa21.01■□□□□ 0.95
SNX13-207ENST00000475800 FAM83GA6ND36 823 aa21.01■□□□□ 0.95
SNX13-207ENST00000475800 PLCH1Q4KWH8 1693 aa21.01■□□□□ 0.95
SNX13-207ENST00000475800 TTC21AQ8NDW8 1320 aa21.01■□□□□ 0.95
SNX13-207ENST00000475800 BRWD3Q6RI45 1802 aa21■□□□□ 0.95
SNX13-207ENST00000475800 MYOM1P52179 1685 aa20.99■□□□□ 0.95
SNX13-207ENST00000475800 ANKRD36BQ8N2N9 1353 aa20.99■□□□□ 0.95
SNX13-207ENST00000475800 EDC4Q6P2E9 1401 aaKnown RBP20.99■□□□□ 0.95
SNX13-207ENST00000475800 VPS72Q15906 364 aa20.99■□□□□ 0.95
SNX13-207ENST00000475800 ABTB2Q8N961 1025 aa20.99■□□□□ 0.95
SNX13-207ENST00000475800 ZRANB1Q9UGI0 708 aa20.99■□□□□ 0.95
SNX13-207ENST00000475800 A0A1W2PP64 1363 aa20.98■□□□□ 0.95
SNX13-207ENST00000475800 CRYBG1Q9Y4K1 1723 aa20.98■□□□□ 0.95
SNX13-207ENST00000475800 BTG4Q9NY30 223 aa20.98■□□□□ 0.95
SNX13-207ENST00000475800 TTC21BQ7Z4L5 1316 aa20.98■□□□□ 0.95
SNX13-207ENST00000475800 SRCAPQ6ZRS2 3230 aa20.97■□□□□ 0.95
SNX13-207ENST00000475800 NLRP13Q86W25 1043 aa20.97■□□□□ 0.95
SNX13-207ENST00000475800 DEFB132Q7Z7B7 95 aa20.96■□□□□ 0.95
SNX13-207ENST00000475800 PIK3C2AO00443 1686 aa20.96■□□□□ 0.95
SNX13-207ENST00000475800 FAM98CQ17RN3 349 aaKnown RBP20.95■□□□□ 0.94
SNX13-207ENST00000475800 NUTM2GQ5VZR2 741 aa20.95■□□□□ 0.94
SNX13-207ENST00000475800 PHRF1Q9P1Y6 1649 aaKnown RBP20.94■□□□□ 0.94
SNX13-207ENST00000475800 CCDC125Q86Z20 511 aa20.94■□□□□ 0.94
SNX13-207ENST00000475800 NWD2Q9ULI1 1742 aa20.93■□□□□ 0.94
SNX13-207ENST00000475800 NLRP6P59044 892 aa20.93■□□□□ 0.94
SNX13-207ENST00000475800 POLR3GLQ9BT43 218 aa20.93■□□□□ 0.94
SNX13-207ENST00000475800 USP19O94966 1318 aa20.93■□□□□ 0.94
SNX13-207ENST00000475800 USP54Q70EL1 1684 aa20.93■□□□□ 0.94
SNX13-207ENST00000475800 SF3B2Q13435 895 aaKnown RBP20.92■□□□□ 0.94
SNX13-207ENST00000475800 KRT27Q7Z3Y8 459 aa20.92■□□□□ 0.94
SNX13-207ENST00000475800 FAM182BQ5T319 152 aa20.91■□□□□ 0.94
SNX13-207ENST00000475800 BLMP54132 1417 aaPredicted RBP20.9■□□□□ 0.94
SNX13-207ENST00000475800 CHRNA2Q15822 529 aa20.9■□□□□ 0.94
SNX13-207ENST00000475800 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.9■□□□□ 0.94
SNX13-207ENST00000475800 PRDM11Q9NQV5 511 aa20.9■□□□□ 0.94
SNX13-207ENST00000475800 USP31Q70CQ4 1352 aa20.89■□□□□ 0.93
SNX13-207ENST00000475800 C11orf95C9JLR9 678 aaPredicted RBP20.89■□□□□ 0.93
SNX13-207ENST00000475800 SLIT3O75094 1523 aa20.88■□□□□ 0.93
SNX13-207ENST00000475800 KIF7Q2M1P5 1343 aa20.88■□□□□ 0.93
SNX13-207ENST00000475800 NRAPQ86VF7 1730 aa20.88■□□□□ 0.93
SNX13-207ENST00000475800 STRN4Q9NRL3 753 aa20.88■□□□□ 0.93
SNX13-207ENST00000475800 ZC3H6P61129 1189 aaKnown RBP20.87■□□□□ 0.93
SNX13-207ENST00000475800 KCNH5Q8NCM2 988 aa20.87■□□□□ 0.93
SNX13-207ENST00000475800 COL14A1Q05707 1796 aaKnown RBP20.87■□□□□ 0.93
SNX13-207ENST00000475800 KIF20BQ96Q89 1820 aa20.86■□□□□ 0.93
SNX13-207ENST00000475800 GCP02774 474 aa20.86■□□□□ 0.93
SNX13-207ENST00000475800 ONECUT3O60422 494 aaPredicted RBP20.85■□□□□ 0.93
SNX13-207ENST00000475800 NME9Q86XW9 330 aa20.85■□□□□ 0.93
SNX13-207ENST00000475800 CPDO75976 1380 aa20.85■□□□□ 0.93
SNX13-207ENST00000475800 KIAA0232Q92628 1395 aa20.85■□□□□ 0.93
SNX13-207ENST00000475800 CCDC7Q96M83 1385 aa20.85■□□□□ 0.93
SNX13-207ENST00000475800 USP35Q9P2H5 1018 aa20.84■□□□□ 0.93
SNX13-207ENST00000475800 NSD3Q9BZ95 1437 aa20.84■□□□□ 0.93
SNX13-207ENST00000475800 OVOS2A0A0J9YW53 1432 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms