RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 DLC1Q96QB1 1528 aa18.25■□□□□ 0.51
UBXN11-214ENST00000475591 IGHDP01880 384 aa18.24■□□□□ 0.51
UBXN11-214ENST00000475591 TSR2Q969E8 191 aaKnown RBP18.24■□□□□ 0.51
UBXN11-214ENST00000475591 MED14O60244 1454 aa18.24■□□□□ 0.51
UBXN11-214ENST00000475591 PDE3AQ14432 1141 aa18.24■□□□□ 0.51
UBXN11-214ENST00000475591 NCKAP5LQ9HCH0 1330 aa18.24■□□□□ 0.51
UBXN11-214ENST00000475591 RGS3P49796 1198 aa18.23■□□□□ 0.51
UBXN11-214ENST00000475591 PPM1GO15355 546 aaPredicted RBP18.23■□□□□ 0.51
UBXN11-214ENST00000475591 RLBP1P12271 317 aa18.22■□□□□ 0.51
UBXN11-214ENST00000475591 TMPOP42166 694 aaKnown RBP18.22■□□□□ 0.51
UBXN11-214ENST00000475591 ZBTB47Q9UFB7 747 aaPredicted RBP18.22■□□□□ 0.51
UBXN11-214ENST00000475591 KIF20BQ96Q89 1820 aa18.22■□□□□ 0.51
UBXN11-214ENST00000475591 TRIM35Q9UPQ4 493 aa18.22■□□□□ 0.51
UBXN11-214ENST00000475591 DIAPH1O60610 1272 aaKnown RBP18.21■□□□□ 0.51
UBXN11-214ENST00000475591 MYH16Q9H6N6 1097 aa18.21■□□□□ 0.51
UBXN11-214ENST00000475591 CLUAP1Q96AJ1 413 aa18.2■□□□□ 0.5
UBXN11-214ENST00000475591 WASLO00401 505 aaPredicted RBP18.2■□□□□ 0.5
UBXN11-214ENST00000475591 ZRANB1Q9UGI0 708 aa18.2■□□□□ 0.5
UBXN11-214ENST00000475591 MAPK8IP3Q9UPT6 1336 aa18.2■□□□□ 0.5
UBXN11-214ENST00000475591 PNPLA6Q8IY17 1366 aa18.19■□□□□ 0.5
UBXN11-214ENST00000475591 TNRQ92752 1358 aa18.19■□□□□ 0.5
UBXN11-214ENST00000475591 PPIP5K1Q6PFW1 1433 aa18.18■□□□□ 0.5
UBXN11-214ENST00000475591 ATP7BP35670 1465 aa18.18■□□□□ 0.5
UBXN11-214ENST00000475591 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.18■□□□□ 0.5
UBXN11-214ENST00000475591 POLKQ9UBT6 870 aa18.18■□□□□ 0.5
UBXN11-214ENST00000475591 NBR1Q14596 966 aa18.18■□□□□ 0.5
UBXN11-214ENST00000475591 NME9Q86XW9 330 aa18.18■□□□□ 0.5
UBXN11-214ENST00000475591 RIPK4P57078 832 aa18.17■□□□□ 0.5
UBXN11-214ENST00000475591 EXOSC9Q06265 439 aaKnown RBP18.17■□□□□ 0.5
UBXN11-214ENST00000475591 C8orf34Q49A92 452 aa18.16■□□□□ 0.5
UBXN11-214ENST00000475591 EMILIN1Q9Y6C2 1016 aa18.16■□□□□ 0.5
UBXN11-214ENST00000475591 NCBP3Q53F19 620 aaKnown RBP18.16■□□□□ 0.5
UBXN11-214ENST00000475591 NUDT16Q96DE0 195 aaKnown RBP18.15■□□□□ 0.5
UBXN11-214ENST00000475591 CPSF1Q10570 1443 aaKnown RBP18.15■□□□□ 0.5
UBXN11-214ENST00000475591 LRRC7Q96NW7 1537 aa18.14■□□□□ 0.49
UBXN11-214ENST00000475591 CEBPAP49715 358 aaPredicted RBP18.14■□□□□ 0.49
UBXN11-214ENST00000475591 PCDHB15Q9Y5E8 787 aa18.14■□□□□ 0.49
UBXN11-214ENST00000475591 HMOX1P09601 288 aa18.13■□□□□ 0.49
UBXN11-214ENST00000475591 PRKAR2BP31323 418 aa18.13■□□□□ 0.49
UBXN11-214ENST00000475591 FAM161AQ3B820 660 aa18.13■□□□□ 0.49
UBXN11-214ENST00000475591 TMEM2Q9UHN6 1383 aa18.13■□□□□ 0.49
UBXN11-214ENST00000475591 PLPPR3Q6T4P5 718 aa18.12■□□□□ 0.49
UBXN11-214ENST00000475591 RSPH6AQ9H0K4 717 aa18.12■□□□□ 0.49
UBXN11-214ENST00000475591 EDC4Q6P2E9 1401 aaKnown RBP18.12■□□□□ 0.49
UBXN11-214ENST00000475591 CPS1P31327 1500 aa18.12■□□□□ 0.49
UBXN11-214ENST00000475591 PRR36Q9H6K5 1346 aa18.12■□□□□ 0.49
UBXN11-214ENST00000475591 UBR1Q8IWV7 1749 aa18.12■□□□□ 0.49
UBXN11-214ENST00000475591 ROBO2Q9HCK4 1378 aa18.12■□□□□ 0.49
UBXN11-214ENST00000475591 SMC4Q9NTJ3 1288 aa18.11■□□□□ 0.49
UBXN11-214ENST00000475591 MAP2P11137 1827 aaKnown RBP18.11■□□□□ 0.49
UBXN11-214ENST00000475591 NUTM2FA1L443 756 aa18.11■□□□□ 0.49
UBXN11-214ENST00000475591 LTKP29376 864 aa18.11■□□□□ 0.49
UBXN11-214ENST00000475591 PHACTR3Q96KR7 559 aa18.11■□□□□ 0.49
UBXN11-214ENST00000475591 RRS1Q15050 365 aaKnown RBP18.1■□□□□ 0.49
UBXN11-214ENST00000475591 SSH1Q8WYL5 1049 aa18.1■□□□□ 0.49
UBXN11-214ENST00000475591 TECPR2O15040 1411 aa18.1■□□□□ 0.49
UBXN11-214ENST00000475591 FCHSD2O94868 740 aa18.1■□□□□ 0.49
UBXN11-214ENST00000475591 CCDC61Q9Y6R9 512 aa18.1■□□□□ 0.49
UBXN11-214ENST00000475591 FAM135BQ49AJ0 1406 aa18.09■□□□□ 0.49
UBXN11-214ENST00000475591 HDGFP51858 240 aaKnown RBP18.09■□□□□ 0.49
UBXN11-214ENST00000475591 CDC42BPGQ6DT37 1551 aa18.09■□□□□ 0.49
UBXN11-214ENST00000475591 KNDC1Q76NI1 1749 aa18.09■□□□□ 0.49
UBXN11-214ENST00000475591 ADAMTS13Q76LX8 1427 aa18.09■□□□□ 0.49
UBXN11-214ENST00000475591 ZKSCAN2Q63HK3 967 aa18.09■□□□□ 0.49
UBXN11-214ENST00000475591 THUMPD2Q9BTF0 503 aaKnown RBP18.08■□□□□ 0.49
UBXN11-214ENST00000475591 TRIM27P14373 513 aa18.07■□□□□ 0.48
UBXN11-214ENST00000475591 MVPQ14764 893 aaKnown RBP18.07■□□□□ 0.48
UBXN11-214ENST00000475591 DZIP1LQ8IYY4 767 aaKnown RBP18.07■□□□□ 0.48
UBXN11-214ENST00000475591 LAS1LQ9Y4W2 734 aaKnown RBP18.07■□□□□ 0.48
UBXN11-214ENST00000475591 FTSJ3Q8IY81 847 aaKnown RBP18.07■□□□□ 0.48
UBXN11-214ENST00000475591 IL16Q14005 1332 aa18.07■□□□□ 0.48
UBXN11-214ENST00000475591 IL13P35225 146 aa18.06■□□□□ 0.48
UBXN11-214ENST00000475591 SLC26A8Q96RN1 970 aa18.06■□□□□ 0.48
UBXN11-214ENST00000475591 COG3Q96JB2 828 aa18.06■□□□□ 0.48
UBXN11-214ENST00000475591 PNNQ9H307 717 aaKnown RBP18.06■□□□□ 0.48
UBXN11-214ENST00000475591 CT47B1P0C2W7 299 aaPredicted RBP18.05■□□□□ 0.48
UBXN11-214ENST00000475591 SIRT1Q96EB6 747 aa18.05■□□□□ 0.48
UBXN11-214ENST00000475591 MON2Q7Z3U7 1717 aa18.05■□□□□ 0.48
UBXN11-214ENST00000475591 SLC4A3P48751 1232 aa18.05■□□□□ 0.48
UBXN11-214ENST00000475591 NOB1Q9ULX3 412 aaKnown RBP18.05■□□□□ 0.48
UBXN11-214ENST00000475591 PMFBP1Q8TBY8 1022 aa18.04■□□□□ 0.48
UBXN11-214ENST00000475591 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.04■□□□□ 0.48
UBXN11-214ENST00000475591 NFE2L2Q16236 605 aa18.03■□□□□ 0.48
UBXN11-214ENST00000475591 CDK12Q9NYV4 1490 aaPredicted RBP18.03■□□□□ 0.48
UBXN11-214ENST00000475591 NEFMP07197 916 aa18.02■□□□□ 0.48
UBXN11-214ENST00000475591 C3P01024 1663 aa18.02■□□□□ 0.48
UBXN11-214ENST00000475591 PTPRUQ92729 1446 aa18.02■□□□□ 0.47
UBXN11-214ENST00000475591 AATKQ6ZMQ8 1374 aa18.02■□□□□ 0.47
UBXN11-214ENST00000475591 ATF7IPQ6VMQ6 1270 aa18.02■□□□□ 0.47
UBXN11-214ENST00000475591 ITPRIPQ8IWB1 547 aa18.02■□□□□ 0.47
UBXN11-214ENST00000475591 PDZRN3Q9UPQ7 1066 aa18.02■□□□□ 0.47
UBXN11-214ENST00000475591 AKAP12Q02952 1782 aa18.02■□□□□ 0.47
UBXN11-214ENST00000475591 ITSN1Q15811 1721 aa18.01■□□□□ 0.47
UBXN11-214ENST00000475591 PLEKHG1Q9ULL1 1385 aa18.01■□□□□ 0.47
UBXN11-214ENST00000475591 ACEP12821 1306 aa18■□□□□ 0.47
UBXN11-214ENST00000475591 SEC24BO95487 1268 aa18■□□□□ 0.47
UBXN11-214ENST00000475591 AAMPQ13685 434 aa18■□□□□ 0.47
UBXN11-214ENST00000475591 TMEM57Q8N5G2 664 aa18■□□□□ 0.47
UBXN11-214ENST00000475591 DDRGK1Q96HY6 314 aa18■□□□□ 0.47
UBXN11-214ENST00000475591 ZNF692Q9BU19 519 aaPredicted RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms