RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 MARF1Q9Y4F3 1742 aaKnown RBP9.82□□□□□ -0.84
SHQ1-207ENST00000475558 SPATA31E1Q6ZUB1 1445 aa9.82□□□□□ -0.84
SHQ1-207ENST00000475558 CDC42BPGQ6DT37 1551 aa9.81□□□□□ -0.84
SHQ1-207ENST00000475558 PXDNQ92626 1479 aa9.81□□□□□ -0.84
SHQ1-207ENST00000475558 XPCQ01831 940 aaPredicted RBP9.81□□□□□ -0.84
SHQ1-207ENST00000475558 BLMP54132 1417 aaPredicted RBP9.81□□□□□ -0.84
SHQ1-207ENST00000475558 SF3B2Q13435 895 aaKnown RBP9.8□□□□□ -0.84
SHQ1-207ENST00000475558 NBPF8Q3BBV2 869 aa9.8□□□□□ -0.84
SHQ1-207ENST00000475558 CARD11Q9BXL7 1154 aa9.8□□□□□ -0.84
SHQ1-207ENST00000475558 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.79□□□□□ -0.84
SHQ1-207ENST00000475558 SPATA31A3Q5VYP0 1347 aa9.79□□□□□ -0.84
SHQ1-207ENST00000475558 RALGAPBQ86X10 1494 aa9.79□□□□□ -0.84
SHQ1-207ENST00000475558 SLIT2O94813 1529 aa9.78□□□□□ -0.84
SHQ1-207ENST00000475558 NUTM2FA1L443 756 aa9.78□□□□□ -0.84
SHQ1-207ENST00000475558 KRT28Q7Z3Y7 464 aa9.78□□□□□ -0.84
SHQ1-207ENST00000475558 WAPLQ7Z5K2 1190 aa9.78□□□□□ -0.84
SHQ1-207ENST00000475558 ZNF579Q8NAF0 562 aaKnown RBP9.78□□□□□ -0.84
SHQ1-207ENST00000475558 C14orf93Q9H972 538 aaKnown RBP9.78□□□□□ -0.84
SHQ1-207ENST00000475558 CREBZFQ9NS37 354 aa9.78□□□□□ -0.84
SHQ1-207ENST00000475558 STK26Q9P289 416 aa9.78□□□□□ -0.84
SHQ1-207ENST00000475558 PPLO60437 1756 aa9.78□□□□□ -0.84
SHQ1-207ENST00000475558 HAP1P54257 671 aaPredicted RBP9.77□□□□□ -0.85
SHQ1-207ENST00000475558 PSME1Q06323 249 aa9.77□□□□□ -0.85
SHQ1-207ENST00000475558 VPS72Q15906 364 aa9.77□□□□□ -0.85
SHQ1-207ENST00000475558 CDCA8Q53HL2 280 aa9.77□□□□□ -0.85
SHQ1-207ENST00000475558 DEFB132Q7Z7B7 95 aa9.77□□□□□ -0.85
SHQ1-207ENST00000475558 SEPT12Q8IYM1 358 aa9.77□□□□□ -0.85
SHQ1-207ENST00000475558 ABCC11Q96J66 1382 aa9.76□□□□□ -0.85
SHQ1-207ENST00000475558 GLI3P10071 1580 aa9.76□□□□□ -0.85
SHQ1-207ENST00000475558 TECPR2O15040 1411 aa9.76□□□□□ -0.85
SHQ1-207ENST00000475558 SPDYE4A6NLX3 237 aa9.76□□□□□ -0.85
SHQ1-207ENST00000475558 ONECUT3O60422 494 aaPredicted RBP9.76□□□□□ -0.85
SHQ1-207ENST00000475558 ADGRF5Q8IZF2 1346 aa9.76□□□□□ -0.85
SHQ1-207ENST00000475558 ROCK2O75116 1388 aaKnown RBP9.75□□□□□ -0.85
SHQ1-207ENST00000475558 HSPA5P11021 654 aaKnown RBP9.75□□□□□ -0.85
SHQ1-207ENST00000475558 KRT27Q7Z3Y8 459 aa9.75□□□□□ -0.85
SHQ1-207ENST00000475558 SIRT1Q96EB6 747 aa9.75□□□□□ -0.85
SHQ1-207ENST00000475558 CCDC9Q9Y3X0 531 aaKnown RBP9.75□□□□□ -0.85
SHQ1-207ENST00000475558 BRWD3Q6RI45 1802 aa9.75□□□□□ -0.85
SHQ1-207ENST00000475558 GPRASP1Q5JY77 1395 aa9.75□□□□□ -0.85
SHQ1-207ENST00000475558 KIF1AQ12756 1690 aa9.74□□□□□ -0.85
SHQ1-207ENST00000475558 PAK3O75914 559 aaPredicted RBP9.74□□□□□ -0.85
SHQ1-207ENST00000475558 TMEM132EQ6IEE7 984 aa9.74□□□□□ -0.85
SHQ1-207ENST00000475558 USP32Q8NFA0 1604 aa9.74□□□□□ -0.85
SHQ1-207ENST00000475558 BAG6P46379 1132 aa9.73□□□□□ -0.85
SHQ1-207ENST00000475558 DIEXFQ68CQ4 756 aaKnown RBP9.73□□□□□ -0.85
SHQ1-207ENST00000475558 PHF8Q9UPP1 1060 aa9.73□□□□□ -0.85
SHQ1-207ENST00000475558 FMN2Q9NZ56 1722 aa9.73□□□□□ -0.85
SHQ1-207ENST00000475558 LMOD2Q6P5Q4 547 aa9.72□□□□□ -0.85
SHQ1-207ENST00000475558 CABLES1Q8TDN4 633 aa9.72□□□□□ -0.85
SHQ1-207ENST00000475558 PUS7Q96PZ0 661 aaKnown RBP9.72□□□□□ -0.85
SHQ1-207ENST00000475558 KNDC1Q76NI1 1749 aa9.72□□□□□ -0.85
SHQ1-207ENST00000475558 NWD2Q9ULI1 1742 aa9.72□□□□□ -0.85
SHQ1-207ENST00000475558 SBNO1A3KN83 1393 aa9.72□□□□□ -0.85
SHQ1-207ENST00000475558 ARHGEF10O15013 1369 aa9.72□□□□□ -0.85
SHQ1-207ENST00000475558 EIF3AQ14152 1382 aaKnown RBP9.72□□□□□ -0.85
SHQ1-207ENST00000475558 PLEKHH1Q9ULM0 1364 aa9.72□□□□□ -0.85
SHQ1-207ENST00000475558 TNS3Q68CZ2 1445 aa9.72□□□□□ -0.85
SHQ1-207ENST00000475558 LRP5O75197 1615 aa9.71□□□□□ -0.85
SHQ1-207ENST00000475558 A0A0G2JS52 829 aa9.71□□□□□ -0.86
SHQ1-207ENST00000475558 TMF1P82094 1093 aa9.71□□□□□ -0.86
SHQ1-207ENST00000475558 MYT1Q01538 1121 aa9.71□□□□□ -0.86
SHQ1-207ENST00000475558 YTHDC2Q9H6S0 1430 aaKnown RBP9.71□□□□□ -0.86
SHQ1-207ENST00000475558 FAM83GA6ND36 823 aa9.7□□□□□ -0.86
SHQ1-207ENST00000475558 PLEKHG5O94827 1062 aa9.7□□□□□ -0.86
SHQ1-207ENST00000475558 NBPF1Q3BBV0 1214 aa9.7□□□□□ -0.86
SHQ1-207ENST00000475558 CFAP70Q5T0N1 1121 aa9.7□□□□□ -0.86
SHQ1-207ENST00000475558 USP47Q96K76 1375 aa9.7□□□□□ -0.86
SHQ1-207ENST00000475558 ST20-MTHFSA0A0A6YYL1 179 aa9.69□□□□□ -0.86
SHQ1-207ENST00000475558 PSDA5PKW4 1024 aaPredicted RBP9.69□□□□□ -0.86
SHQ1-207ENST00000475558 RGPD8O14715 1765 aaPredicted RBP9.69□□□□□ -0.86
SHQ1-207ENST00000475558 PIK3C2GO75747 1445 aa9.69□□□□□ -0.86
SHQ1-207ENST00000475558 PLCH1Q4KWH8 1693 aa9.69□□□□□ -0.86
SHQ1-207ENST00000475558 IFT172Q9UG01 1749 aa9.68□□□□□ -0.86
SHQ1-207ENST00000475558 NRXN1Q9ULB1 1477 aa9.68□□□□□ -0.86
SHQ1-207ENST00000475558 GALR2O43603 387 aaPredicted RBP9.68□□□□□ -0.86
SHQ1-207ENST00000475558 FAM98CQ17RN3 349 aaKnown RBP9.68□□□□□ -0.86
SHQ1-207ENST00000475558 EN1Q05925 392 aaPredicted RBP9.67□□□□□ -0.86
SHQ1-207ENST00000475558 PMFBP1Q8TBY8 1022 aa9.67□□□□□ -0.86
SHQ1-207ENST00000475558 BTG4Q9NY30 223 aa9.67□□□□□ -0.86
SHQ1-207ENST00000475558 ANKARQ7Z5J8 1434 aa9.66□□□□□ -0.86
SHQ1-207ENST00000475558 SAFB2Q14151 953 aaKnown RBP eCLIP9.66□□□□□ -0.86
SHQ1-207ENST00000475558 PRAM1Q96QH2 718 aa9.66□□□□□ -0.86
SHQ1-207ENST00000475558 POGKQ9P215 609 aa9.66□□□□□ -0.86
SHQ1-207ENST00000475558 ABCA3Q99758 1704 aa9.65□□□□□ -0.86
SHQ1-207ENST00000475558 SPATA31A5Q5VU36 1347 aa9.65□□□□□ -0.86
SHQ1-207ENST00000475558 SPATA31A7Q8IWB4 1347 aa9.65□□□□□ -0.86
SHQ1-207ENST00000475558 R3HDM1Q15032 1099 aaKnown RBP9.65□□□□□ -0.86
SHQ1-207ENST00000475558 RGPD1P0DJD0 1748 aa9.65□□□□□ -0.87
SHQ1-207ENST00000475558 WASHC2AQ641Q2 1341 aa9.64□□□□□ -0.87
SHQ1-207ENST00000475558 DDX10Q13206 875 aaKnown RBP9.64□□□□□ -0.87
SHQ1-207ENST00000475558 DISP2A7MBM2 1401 aa9.64□□□□□ -0.87
SHQ1-207ENST00000475558 COL14A1Q05707 1796 aaKnown RBP9.63□□□□□ -0.87
SHQ1-207ENST00000475558 CENPJQ9HC77 1338 aaPredicted RBP9.63□□□□□ -0.87
SHQ1-207ENST00000475558 NRAPQ86VF7 1730 aa9.63□□□□□ -0.87
SHQ1-207ENST00000475558 ANP32CO43423 234 aa9.63□□□□□ -0.87
SHQ1-207ENST00000475558 FAM182BQ5T319 152 aa9.63□□□□□ -0.87
SHQ1-207ENST00000475558 PHF12Q96QT6 1004 aa9.63□□□□□ -0.87
SHQ1-207ENST00000475558 TESK2Q96S53 571 aa9.63□□□□□ -0.87
SHQ1-207ENST00000475558 HIRIP3Q9BW71 556 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms