RNA–Protein interactions for RNA: ENST00000475255.5

SEMA4D-217, Transcript of semaphorin 4D, humanhuman

TSL 1 (best)

Gene SEMA4D, Length 3,053 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-217ENST00000475255 DDIT3P35638 169 aa17.15■□□□□ 0.34
SEMA4D-217ENST00000475255 PKNOX2Q96KN3 472 aa17.15■□□□□ 0.34
SEMA4D-217ENST00000475255 MROH2AA6NES4 1674 aa17.15■□□□□ 0.34
SEMA4D-217ENST00000475255 GAS2L2Q8NHY3 880 aa17.15■□□□□ 0.34
SEMA4D-217ENST00000475255 CHD1O14646 1710 aa17.14■□□□□ 0.34
SEMA4D-217ENST00000475255 RBM25P49756 843 aaKnown RBP17.14■□□□□ 0.33
SEMA4D-217ENST00000475255 NCLP19338 710 aaKnown RBP17.13■□□□□ 0.33
SEMA4D-217ENST00000475255 ZMYM3Q14202 1370 aa17.13■□□□□ 0.33
SEMA4D-217ENST00000475255 MYOM2P54296 1465 aa17.13■□□□□ 0.33
SEMA4D-217ENST00000475255 TBC1D9Q6ZT07 1266 aa17.13■□□□□ 0.33
SEMA4D-217ENST00000475255 MINK1Q8N4C8 1332 aaPredicted RBP17.13■□□□□ 0.33
SEMA4D-217ENST00000475255 ARID3AQ99856 593 aa17.13■□□□□ 0.33
SEMA4D-217ENST00000475255 ZCCHC11Q5TAX3 1644 aaKnown RBP17.13■□□□□ 0.33
SEMA4D-217ENST00000475255 EVC2Q86UK5 1308 aa17.12■□□□□ 0.33
SEMA4D-217ENST00000475255 GBP4Q96PP9 640 aa17.12■□□□□ 0.33
SEMA4D-217ENST00000475255 SBNO2Q9Y2G9 1366 aa17.12■□□□□ 0.33
SEMA4D-217ENST00000475255 HMOX1P09601 288 aa17.12■□□□□ 0.33
SEMA4D-217ENST00000475255 RAB3GAP1Q15042 981 aa17.12■□□□□ 0.33
SEMA4D-217ENST00000475255 TSPYL6Q8N831 410 aa17.12■□□□□ 0.33
SEMA4D-217ENST00000475255 ZMYND15Q9H091 742 aa17.12■□□□□ 0.33
SEMA4D-217ENST00000475255 ATAD2Q6PL18 1390 aa17.12■□□□□ 0.33
SEMA4D-217ENST00000475255 CHAMP1Q96JM3 812 aa17.12■□□□□ 0.33
SEMA4D-217ENST00000475255 ATP7AQ04656 1500 aa17.11■□□□□ 0.33
SEMA4D-217ENST00000475255 APBB1O00213 710 aa17.11■□□□□ 0.33
SEMA4D-217ENST00000475255 KIAA1210Q9ULL0 1709 aa17.11■□□□□ 0.33
SEMA4D-217ENST00000475255 AK9Q5TCS8 1911 aa17.1■□□□□ 0.33
SEMA4D-217ENST00000475255 SHROOM2Q13796 1616 aa17.1■□□□□ 0.33
SEMA4D-217ENST00000475255 FANCAO15360 1455 aa17.1■□□□□ 0.33
SEMA4D-217ENST00000475255 ZBTB7CA1YPR0 619 aa17.1■□□□□ 0.33
SEMA4D-217ENST00000475255 IPO8O15397 1037 aaKnown RBP17.1■□□□□ 0.33
SEMA4D-217ENST00000475255 SNX21Q969T3 373 aa17.1■□□□□ 0.33
SEMA4D-217ENST00000475255 A0A1W2PP64 1363 aa17.09■□□□□ 0.33
SEMA4D-217ENST00000475255 KIF1BO60333 1816 aa17.09■□□□□ 0.33
SEMA4D-217ENST00000475255 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.09■□□□□ 0.33
SEMA4D-217ENST00000475255 DDX49Q9Y6V7 483 aaKnown RBP17.09■□□□□ 0.33
SEMA4D-217ENST00000475255 QRICH2Q9H0J4 1663 aa17.09■□□□□ 0.33
SEMA4D-217ENST00000475255 FYB1O15117 783 aa17.09■□□□□ 0.33
SEMA4D-217ENST00000475255 NCOA3Q9Y6Q9 1424 aa17.08■□□□□ 0.33
SEMA4D-217ENST00000475255 K7ELQ4 463 aaPredicted RBP17.08■□□□□ 0.33
SEMA4D-217ENST00000475255 PRKAR2BP31323 418 aa17.08■□□□□ 0.33
SEMA4D-217ENST00000475255 PKP1Q13835 747 aa17.08■□□□□ 0.33
SEMA4D-217ENST00000475255 SIRT2Q8IXJ6 389 aa17.08■□□□□ 0.33
SEMA4D-217ENST00000475255 ANKRD36BQ8N2N9 1353 aa17.08■□□□□ 0.32
SEMA4D-217ENST00000475255 KIF16BQ96L93 1317 aa17.07■□□□□ 0.32
SEMA4D-217ENST00000475255 DIAPH1O60610 1272 aaKnown RBP17.07■□□□□ 0.32
SEMA4D-217ENST00000475255 BMP2KLQ5H9B9 411 aa17.07■□□□□ 0.32
SEMA4D-217ENST00000475255 FOXD4L5Q5VV16 416 aaPredicted RBP17.07■□□□□ 0.32
SEMA4D-217ENST00000475255 C16orf71Q8IYS4 520 aaPredicted RBP17.07■□□□□ 0.32
SEMA4D-217ENST00000475255 FOXD4L4Q8WXT5 416 aaPredicted RBP17.07■□□□□ 0.32
SEMA4D-217ENST00000475255 PHACTR3Q96KR7 559 aa17.07■□□□□ 0.32
SEMA4D-217ENST00000475255 DEPDC5O75140 1603 aa17.07■□□□□ 0.32
SEMA4D-217ENST00000475255 NASPP49321 788 aaPredicted RBP17.07■□□□□ 0.32
SEMA4D-217ENST00000475255 PPIP5K1Q6PFW1 1433 aa17.07■□□□□ 0.32
SEMA4D-217ENST00000475255 ADGRL1O94910 1474 aa17.06■□□□□ 0.32
SEMA4D-217ENST00000475255 CT47B1P0C2W7 299 aaPredicted RBP17.06■□□□□ 0.32
SEMA4D-217ENST00000475255 MCTP1Q6DN14 999 aa17.06■□□□□ 0.32
SEMA4D-217ENST00000475255 ZBTB7BO15156 539 aaPredicted RBP17.06■□□□□ 0.32
SEMA4D-217ENST00000475255 MROH1Q8NDA8 1641 aa17.05■□□□□ 0.32
SEMA4D-217ENST00000475255 CAVIN1Q6NZI2 390 aaKnown RBP17.05■□□□□ 0.32
SEMA4D-217ENST00000475255 PPRC1Q5VV67 1664 aaKnown RBP17.04■□□□□ 0.32
SEMA4D-217ENST00000475255 BAG4O95429 457 aaKnown RBP17.04■□□□□ 0.32
SEMA4D-217ENST00000475255 RBM10P98175 930 aaKnown RBP17.04■□□□□ 0.32
SEMA4D-217ENST00000475255 OTUD7AQ8TE49 926 aaPredicted RBP17.04■□□□□ 0.32
SEMA4D-217ENST00000475255 VWDEQ8N2E2 1590 aa17.04■□□□□ 0.32
SEMA4D-217ENST00000475255 KIAA1211Q6ZU35 1233 aa17.04■□□□□ 0.32
SEMA4D-217ENST00000475255 TULP4Q9NRJ4 1543 aa17.03■□□□□ 0.32
SEMA4D-217ENST00000475255 NRXN1Q9ULB1 1477 aa17.03■□□□□ 0.32
SEMA4D-217ENST00000475255 GSPT1P15170 499 aaKnown RBP17.03■□□□□ 0.32
SEMA4D-217ENST00000475255 CIZ1Q9ULV3 898 aaPredicted RBP17.03■□□□□ 0.32
SEMA4D-217ENST00000475255 NPATQ14207 1427 aa17.03■□□□□ 0.32
SEMA4D-217ENST00000475255 ADGRB1O14514 1584 aa17.03■□□□□ 0.32
SEMA4D-217ENST00000475255 RBM27Q9P2N5 1060 aaKnown RBP17.02■□□□□ 0.32
SEMA4D-217ENST00000475255 ABCC11Q96J66 1382 aa17.02■□□□□ 0.32
SEMA4D-217ENST00000475255 EFCAB6Q5THR3 1501 aa17.02■□□□□ 0.32
SEMA4D-217ENST00000475255 RRP9O43818 475 aaKnown RBP17.02■□□□□ 0.31
SEMA4D-217ENST00000475255 DCTN1Q14203 1278 aa17.02■□□□□ 0.31
SEMA4D-217ENST00000475255 MYO3AQ8NEV4 1616 aa17.01■□□□□ 0.31
SEMA4D-217ENST00000475255 VAMP4O75379 141 aa17.01■□□□□ 0.31
SEMA4D-217ENST00000475255 PRAM1Q96QH2 718 aa17.01■□□□□ 0.31
SEMA4D-217ENST00000475255 ADGRB2O60241 1585 aa17.01■□□□□ 0.31
SEMA4D-217ENST00000475255 FAM83GA6ND36 823 aa17.01■□□□□ 0.31
SEMA4D-217ENST00000475255 SKOR2Q2VWA4 1001 aaPredicted RBP17.01■□□□□ 0.31
SEMA4D-217ENST00000475255 MRPL50Q8N5N7 158 aaKnown RBP17■□□□□ 0.31
SEMA4D-217ENST00000475255 CABP1Q9NZU7 370 aa17■□□□□ 0.31
SEMA4D-217ENST00000475255 GOLGA6L22H0YM25 854 aa17■□□□□ 0.31
SEMA4D-217ENST00000475255 SMARCA5O60264 1052 aaPredicted RBP17■□□□□ 0.31
SEMA4D-217ENST00000475255 ZGPATQ8N5A5 531 aaKnown RBP17■□□□□ 0.31
SEMA4D-217ENST00000475255 IFT172Q9UG01 1749 aa17■□□□□ 0.31
SEMA4D-217ENST00000475255 TPRNQ4KMQ1 711 aa17■□□□□ 0.31
SEMA4D-217ENST00000475255 C8orf58Q8NAV2 365 aa16.99■□□□□ 0.31
SEMA4D-217ENST00000475255 ANP32BQ92688 251 aaKnown RBP16.99■□□□□ 0.31
SEMA4D-217ENST00000475255 INO80Q9ULG1 1556 aaPredicted RBP16.98■□□□□ 0.31
SEMA4D-217ENST00000475255 CDC45O75419 566 aa16.98■□□□□ 0.31
SEMA4D-217ENST00000475255 KRT24Q2M2I5 525 aa16.98■□□□□ 0.31
SEMA4D-217ENST00000475255 ADGRB3O60242 1522 aa16.98■□□□□ 0.31
SEMA4D-217ENST00000475255 GCC1Q96CN9 775 aa16.98■□□□□ 0.31
SEMA4D-217ENST00000475255 IL16Q14005 1332 aa16.98■□□□□ 0.31
SEMA4D-217ENST00000475255 ALDH1L2Q3SY69 923 aa16.98■□□□□ 0.31
SEMA4D-217ENST00000475255 MBIPQ9NS73 344 aa16.98■□□□□ 0.31
SEMA4D-217ENST00000475255 ISY1Q9ULR0 285 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms