RNA–Protein interactions for RNA: ENST00000474986.2

YIF1A-206, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 1 (best)

Gene YIF1A, Length 860 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-206ENST00000474986 TERF2IPQ9NYB0 399 aa31.81■■■□□ 2.68
YIF1A-206ENST00000474986 LRP6O75581 1613 aa31.81■■■□□ 2.68
YIF1A-206ENST00000474986 CD163L1Q9NR16 1453 aa31.8■■■□□ 2.68
YIF1A-206ENST00000474986 HDGFL2Q7Z4V5 671 aaPredicted RBP31.8■■■□□ 2.68
YIF1A-206ENST00000474986 SOCS7O14512 581 aa31.79■■■□□ 2.68
YIF1A-206ENST00000474986 KTN1Q86UP2 1357 aaKnown RBP31.79■■■□□ 2.68
YIF1A-206ENST00000474986 NUTM2BA6NNL0 878 aaPredicted RBP31.78■■■□□ 2.68
YIF1A-206ENST00000474986 NUTM2EB1AL46 878 aaPredicted RBP31.78■■■□□ 2.68
YIF1A-206ENST00000474986 NUTM2AQ8IVF1 878 aaPredicted RBP31.78■■■□□ 2.68
YIF1A-206ENST00000474986 AKAP12Q02952 1782 aa31.76■■■□□ 2.68
YIF1A-206ENST00000474986 TTC21AQ8NDW8 1320 aa31.75■■■□□ 2.67
YIF1A-206ENST00000474986 A0A1W2PP64 1363 aa31.74■■■□□ 2.67
YIF1A-206ENST00000474986 ANKRD36BQ8N2N9 1353 aa31.74■■■□□ 2.67
YIF1A-206ENST00000474986 TTC21BQ7Z4L5 1316 aa31.74■■■□□ 2.67
YIF1A-206ENST00000474986 MEX3CQ5U5Q3 659 aaKnown RBP31.73■■■□□ 2.67
YIF1A-206ENST00000474986 ABTB2Q8N961 1025 aa31.73■■■□□ 2.67
YIF1A-206ENST00000474986 EDC4Q6P2E9 1401 aaKnown RBP31.71■■■□□ 2.67
YIF1A-206ENST00000474986 MON2Q7Z3U7 1717 aa31.71■■■□□ 2.67
YIF1A-206ENST00000474986 NRKQ7Z2Y5 1582 aa31.69■■■□□ 2.66
YIF1A-206ENST00000474986 HAP1P54257 671 aaPredicted RBP31.68■■■□□ 2.66
YIF1A-206ENST00000474986 NLRP13Q86W25 1043 aa31.68■■■□□ 2.66
YIF1A-206ENST00000474986 CABLES1Q8TDN4 633 aa31.68■■■□□ 2.66
YIF1A-206ENST00000474986 PHF23Q9BUL5 403 aaPredicted RBP31.68■■■□□ 2.66
YIF1A-206ENST00000474986 C11orf95C9JLR9 678 aaPredicted RBP31.67■■■□□ 2.66
YIF1A-206ENST00000474986 ADAMTS2O95450 1211 aa31.67■■■□□ 2.66
YIF1A-206ENST00000474986 USP19O94966 1318 aa31.66■■■□□ 2.66
YIF1A-206ENST00000474986 MYOM1P52179 1685 aa31.64■■■□□ 2.66
YIF1A-206ENST00000474986 NLRP6P59044 892 aa31.64■■■□□ 2.66
YIF1A-206ENST00000474986 NUTM2GQ5VZR2 741 aa31.63■■■□□ 2.65
YIF1A-206ENST00000474986 POLR3GLQ9BT43 218 aa31.63■■■□□ 2.65
YIF1A-206ENST00000474986 ABCA3Q99758 1704 aa31.63■■■□□ 2.65
YIF1A-206ENST00000474986 PIK3C2AO00443 1686 aa31.61■■■□□ 2.65
YIF1A-206ENST00000474986 KIF7Q2M1P5 1343 aa31.61■■■□□ 2.65
YIF1A-206ENST00000474986 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.61■■■□□ 2.65
YIF1A-206ENST00000474986 C8orf37Q96NL8 207 aa31.61■■■□□ 2.65
YIF1A-206ENST00000474986 CRYBG1Q9Y4K1 1723 aa31.61■■■□□ 2.65
YIF1A-206ENST00000474986 USP31Q70CQ4 1352 aa31.6■■■□□ 2.65
YIF1A-206ENST00000474986 PLEKHG5O94827 1062 aa31.59■■■□□ 2.65
YIF1A-206ENST00000474986 NGLY1Q96IV0 654 aa31.59■■■□□ 2.65
YIF1A-206ENST00000474986 FNBP4Q8N3X1 1017 aaPredicted RBP31.57■■■□□ 2.64
YIF1A-206ENST00000474986 AFF2P51816 1311 aa31.56■■■□□ 2.64
YIF1A-206ENST00000474986 GCP02774 474 aa31.56■■■□□ 2.64
YIF1A-206ENST00000474986 ZNF772Q68DY9 489 aaPredicted RBP31.56■■■□□ 2.64
YIF1A-206ENST00000474986 RGS17Q9UGC6 210 aaPredicted RBP31.56■■■□□ 2.64
YIF1A-206ENST00000474986 PHRF1Q9P1Y6 1649 aaKnown RBP31.56■■■□□ 2.64
YIF1A-206ENST00000474986 MARF1Q9Y4F3 1742 aaKnown RBP31.55■■■□□ 2.64
YIF1A-206ENST00000474986 SLIT3O75094 1523 aa31.55■■■□□ 2.64
YIF1A-206ENST00000474986 NME9Q86XW9 330 aa31.55■■■□□ 2.64
YIF1A-206ENST00000474986 CCDC7Q96M83 1385 aa31.54■■■□□ 2.64
YIF1A-206ENST00000474986 KCNH5Q8NCM2 988 aa31.53■■■□□ 2.64
YIF1A-206ENST00000474986 CARD14Q9BXL6 1004 aa31.53■■■□□ 2.64
YIF1A-206ENST00000474986 USP54Q70EL1 1684 aa31.52■■■□□ 2.64
YIF1A-206ENST00000474986 CPDO75976 1380 aa31.52■■■□□ 2.64
YIF1A-206ENST00000474986 NSD3Q9BZ95 1437 aa31.51■■■□□ 2.64
YIF1A-206ENST00000474986 WASHC2AQ641Q2 1341 aa31.5■■■□□ 2.63
YIF1A-206ENST00000474986 OVOS2A0A0J9YW53 1432 aa31.5■■■□□ 2.63
YIF1A-206ENST00000474986 OVOS2Q6IE36 1432 aa31.5■■■□□ 2.63
YIF1A-206ENST00000474986 SLIT2O94813 1529 aa31.5■■■□□ 2.63
YIF1A-206ENST00000474986 KIAA0232Q92628 1395 aa31.49■■■□□ 2.63
YIF1A-206ENST00000474986 FAM83GA6ND36 823 aa31.49■■■□□ 2.63
YIF1A-206ENST00000474986 PRDM11Q9NQV5 511 aa31.49■■■□□ 2.63
YIF1A-206ENST00000474986 PANK3Q9H999 370 aa31.48■■■□□ 2.63
YIF1A-206ENST00000474986 ZRANB1Q9UGI0 708 aa31.48■■■□□ 2.63
YIF1A-206ENST00000474986 FYB1O15117 783 aa31.47■■■□□ 2.63
YIF1A-206ENST00000474986 ZC3H6P61129 1189 aaKnown RBP31.47■■■□□ 2.63
YIF1A-206ENST00000474986 USP21Q9UK80 565 aa31.47■■■□□ 2.63
YIF1A-206ENST00000474986 COG3Q96JB2 828 aa31.46■■■□□ 2.63
YIF1A-206ENST00000474986 BCL9LQ86UU0 1499 aa31.45■■■□□ 2.62
YIF1A-206ENST00000474986 CGNL1Q0VF96 1302 aa31.45■■■□□ 2.62
YIF1A-206ENST00000474986 COL14A1Q05707 1796 aaKnown RBP31.44■■■□□ 2.62
YIF1A-206ENST00000474986 POTEAQ6S8J7 498 aa31.43■■■□□ 2.62
YIF1A-206ENST00000474986 UNC5CLQ8IV45 518 aa31.42■■■□□ 2.62
YIF1A-206ENST00000474986 NFAT5O94916 1531 aa31.41■■■□□ 2.62
YIF1A-206ENST00000474986 NWD2Q9ULI1 1742 aa31.41■■■□□ 2.62
YIF1A-206ENST00000474986 ARHGEF25Q86VW2 580 aa31.4■■■□□ 2.62
YIF1A-206ENST00000474986 TRPC5Q9UL62 973 aaPredicted RBP31.4■■■□□ 2.62
YIF1A-206ENST00000474986 GGNBP2Q9H3C7 697 aa31.39■■■□□ 2.62
YIF1A-206ENST00000474986 QTRT2Q9H974 415 aaKnown RBP31.39■■■□□ 2.62
YIF1A-206ENST00000474986 AATKQ6ZMQ8 1374 aa31.39■■■□□ 2.62
YIF1A-206ENST00000474986 CHRNA2Q15822 529 aa31.38■■■□□ 2.61
YIF1A-206ENST00000474986 BTG4Q9NY30 223 aa31.38■■■□□ 2.61
YIF1A-206ENST00000474986 ATRNO75882 1429 aa31.38■■■□□ 2.61
YIF1A-206ENST00000474986 PLCH1Q4KWH8 1693 aa31.38■■■□□ 2.61
YIF1A-206ENST00000474986 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.38■■■□□ 2.61
YIF1A-206ENST00000474986 SOX12O15370 315 aa31.36■■■□□ 2.61
YIF1A-206ENST00000474986 KNSTRNQ9Y448 316 aa31.36■■■□□ 2.61
YIF1A-206ENST00000474986 KIF20BQ96Q89 1820 aa31.35■■■□□ 2.61
YIF1A-206ENST00000474986 NSD2O96028 1365 aa31.34■■■□□ 2.61
YIF1A-206ENST00000474986 LMO7Q8WWI1 1683 aa31.33■■■□□ 2.61
YIF1A-206ENST00000474986 VPS72Q15906 364 aa31.33■■■□□ 2.61
YIF1A-206ENST00000474986 ABCC6O95255 1503 aa31.33■■■□□ 2.61
YIF1A-206ENST00000474986 RBM6P78332 1123 aaKnown RBP31.32■■■□□ 2.6
YIF1A-206ENST00000474986 RXRBP28702 533 aa31.31■■■□□ 2.6
YIF1A-206ENST00000474986 CAMTA1Q9Y6Y1 1673 aa31.3■■■□□ 2.6
YIF1A-206ENST00000474986 PER1O15534 1290 aaPredicted RBP31.3■■■□□ 2.6
YIF1A-206ENST00000474986 NRAPQ86VF7 1730 aa31.29■■■□□ 2.6
YIF1A-206ENST00000474986 ZBTB7CA1YPR0 619 aa31.29■■■□□ 2.6
YIF1A-206ENST00000474986 GJD4Q96KN9 370 aaPredicted RBP31.28■■■□□ 2.6
YIF1A-206ENST00000474986 COL18A1P39060 1754 aa31.26■■■□□ 2.59
YIF1A-206ENST00000474986 AMER1Q5JTC6 1135 aaPredicted RBP31.26■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms