RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 ZNF692Q9BU19 519 aaPredicted RBP13.8□□□□□ -0.2
COL8A1-206ENST00000474648 TERF2IPQ9NYB0 399 aa13.8□□□□□ -0.2
COL8A1-206ENST00000474648 FOXO3O43524 673 aa13.79□□□□□ -0.2
COL8A1-206ENST00000474648 TOM1O60784 492 aa13.79□□□□□ -0.2
COL8A1-206ENST00000474648 HDGFL2Q7Z4V5 671 aaPredicted RBP13.79□□□□□ -0.2
COL8A1-206ENST00000474648 A0A1W2PP64 1363 aa13.79□□□□□ -0.2
COL8A1-206ENST00000474648 UBAP1LF5GYI3 381 aa13.78□□□□□ -0.2
COL8A1-206ENST00000474648 DDX17Q92841 729 aaKnown RBP13.78□□□□□ -0.2
COL8A1-206ENST00000474648 MYOM1P52179 1685 aa13.77□□□□□ -0.21
COL8A1-206ENST00000474648 TOPAZ1Q8N9V7 1692 aa13.76□□□□□ -0.21
COL8A1-206ENST00000474648 SSH2Q76I76 1423 aa13.76□□□□□ -0.21
COL8A1-206ENST00000474648 KTN1Q86UP2 1357 aaKnown RBP13.76□□□□□ -0.21
COL8A1-206ENST00000474648 PSME1Q06323 249 aa13.76□□□□□ -0.21
COL8A1-206ENST00000474648 TTC21BQ7Z4L5 1316 aa13.75□□□□□ -0.21
COL8A1-206ENST00000474648 AMER1Q5JTC6 1135 aaPredicted RBP13.75□□□□□ -0.21
COL8A1-206ENST00000474648 KRT28Q7Z3Y7 464 aa13.75□□□□□ -0.21
COL8A1-206ENST00000474648 RGPD8O14715 1765 aaPredicted RBP13.75□□□□□ -0.21
COL8A1-206ENST00000474648 USP6P35125 1406 aa13.74□□□□□ -0.21
COL8A1-206ENST00000474648 PIP4K2BP78356 416 aa13.74□□□□□ -0.21
COL8A1-206ENST00000474648 XPCQ01831 940 aaPredicted RBP13.74□□□□□ -0.21
COL8A1-206ENST00000474648 KNSTRNQ9Y448 316 aa13.74□□□□□ -0.21
COL8A1-206ENST00000474648 NSD3Q9BZ95 1437 aa13.73□□□□□ -0.21
COL8A1-206ENST00000474648 NPHP3Q7Z494 1330 aa13.73□□□□□ -0.21
COL8A1-206ENST00000474648 FYB1O15117 783 aa13.73□□□□□ -0.21
COL8A1-206ENST00000474648 EDC4Q6P2E9 1401 aaKnown RBP13.73□□□□□ -0.21
COL8A1-206ENST00000474648 SOS2Q07890 1332 aaPredicted RBP13.72□□□□□ -0.21
COL8A1-206ENST00000474648 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.72□□□□□ -0.21
COL8A1-206ENST00000474648 BRD4O60885 1362 aaPredicted RBP13.71□□□□□ -0.21
COL8A1-206ENST00000474648 DIEXFQ68CQ4 756 aaKnown RBP13.71□□□□□ -0.21
COL8A1-206ENST00000474648 NME9Q86XW9 330 aa13.71□□□□□ -0.21
COL8A1-206ENST00000474648 ZRANB1Q9UGI0 708 aa13.71□□□□□ -0.21
COL8A1-206ENST00000474648 ITSN1Q15811 1721 aa13.7□□□□□ -0.22
COL8A1-206ENST00000474648 SBNO1A3KN83 1393 aa13.7□□□□□ -0.22
COL8A1-206ENST00000474648 NPC1L1Q9UHC9 1359 aa13.7□□□□□ -0.22
COL8A1-206ENST00000474648 CGNL1Q0VF96 1302 aa13.69□□□□□ -0.22
COL8A1-206ENST00000474648 TTC21AQ8NDW8 1320 aa13.69□□□□□ -0.22
COL8A1-206ENST00000474648 PXDNQ92626 1479 aa13.69□□□□□ -0.22
COL8A1-206ENST00000474648 PAK3O75914 559 aaPredicted RBP13.69□□□□□ -0.22
COL8A1-206ENST00000474648 KIF1AQ12756 1690 aa13.69□□□□□ -0.22
COL8A1-206ENST00000474648 CC2D1BQ5T0F9 858 aaKnown RBP13.68□□□□□ -0.22
COL8A1-206ENST00000474648 GGNBP2Q9H3C7 697 aa13.68□□□□□ -0.22
COL8A1-206ENST00000474648 SPATA31A3Q5VYP0 1347 aa13.67□□□□□ -0.22
COL8A1-206ENST00000474648 ABTB2Q8N961 1025 aa13.67□□□□□ -0.22
COL8A1-206ENST00000474648 AKAP12Q02952 1782 aa13.67□□□□□ -0.22
COL8A1-206ENST00000474648 USP31Q70CQ4 1352 aa13.67□□□□□ -0.22
COL8A1-206ENST00000474648 ROBO1Q9Y6N7 1651 aa13.66□□□□□ -0.22
COL8A1-206ENST00000474648 CNGB1Q14028 1251 aaPredicted RBP13.66□□□□□ -0.22
COL8A1-206ENST00000474648 NUTM2GQ5VZR2 741 aa13.66□□□□□ -0.22
COL8A1-206ENST00000474648 MON2Q7Z3U7 1717 aa13.66□□□□□ -0.22
COL8A1-206ENST00000474648 NLRP6P59044 892 aa13.65□□□□□ -0.22
COL8A1-206ENST00000474648 PRKRIP1Q9H875 184 aaPredicted RBP13.65□□□□□ -0.22
COL8A1-206ENST00000474648 AHDC1Q5TGY3 1603 aaPredicted RBP13.64□□□□□ -0.23
COL8A1-206ENST00000474648 NRKQ7Z2Y5 1582 aa13.64□□□□□ -0.23
COL8A1-206ENST00000474648 NSD2O96028 1365 aa13.64□□□□□ -0.23
COL8A1-206ENST00000474648 MORC1Q86VD1 984 aa13.64□□□□□ -0.23
COL8A1-206ENST00000474648 LRRC59Q96AG4 307 aaKnown RBP13.64□□□□□ -0.23
COL8A1-206ENST00000474648 PARD3Q8TEW0 1356 aa13.63□□□□□ -0.23
COL8A1-206ENST00000474648 RALBP1Q15311 655 aa13.63□□□□□ -0.23
COL8A1-206ENST00000474648 LMOD2Q6P5Q4 547 aa13.63□□□□□ -0.23
COL8A1-206ENST00000474648 NLRP13Q86W25 1043 aa13.63□□□□□ -0.23
COL8A1-206ENST00000474648 COG3Q96JB2 828 aa13.63□□□□□ -0.23
COL8A1-206ENST00000474648 NHSL1Q5SYE7 1610 aa13.63□□□□□ -0.23
COL8A1-206ENST00000474648 TNS3Q68CZ2 1445 aa13.63□□□□□ -0.23
COL8A1-206ENST00000474648 TRPM3Q9HCF6 1732 aaPredicted RBP13.62□□□□□ -0.23
COL8A1-206ENST00000474648 ANP32CO43423 234 aa13.62□□□□□ -0.23
COL8A1-206ENST00000474648 FBLN1P23142 703 aa13.62□□□□□ -0.23
COL8A1-206ENST00000474648 HSPA1LP34931 641 aa13.62□□□□□ -0.23
COL8A1-206ENST00000474648 OVOS2A0A0J9YW53 1432 aa13.62□□□□□ -0.23
COL8A1-206ENST00000474648 OVOS2Q6IE36 1432 aa13.62□□□□□ -0.23
COL8A1-206ENST00000474648 USP19O94966 1318 aa13.61□□□□□ -0.23
COL8A1-206ENST00000474648 ARHGEF10O15013 1369 aa13.6□□□□□ -0.23
COL8A1-206ENST00000474648 TNNT2P45379 298 aaPredicted RBP13.6□□□□□ -0.23
COL8A1-206ENST00000474648 MIER1Q8N108 512 aa13.6□□□□□ -0.23
COL8A1-206ENST00000474648 CABLES1Q8TDN4 633 aa13.6□□□□□ -0.23
COL8A1-206ENST00000474648 GCP02774 474 aa13.59□□□□□ -0.23
COL8A1-206ENST00000474648 PPP2R1AP30153 589 aa13.59□□□□□ -0.23
COL8A1-206ENST00000474648 FBXO41Q8TF61 875 aa13.59□□□□□ -0.23
COL8A1-206ENST00000474648 PIK3C2AO00443 1686 aa13.59□□□□□ -0.23
COL8A1-206ENST00000474648 ALS2Q96Q42 1657 aa13.58□□□□□ -0.24
COL8A1-206ENST00000474648 AATKQ6ZMQ8 1374 aa13.58□□□□□ -0.24
COL8A1-206ENST00000474648 PNPLA6Q8IY17 1366 aa13.58□□□□□ -0.24
COL8A1-206ENST00000474648 COL16A1Q07092 1604 aaPredicted RBP13.57□□□□□ -0.24
COL8A1-206ENST00000474648 PLEKHG5O94827 1062 aa13.57□□□□□ -0.24
COL8A1-206ENST00000474648 KCNH5Q8NCM2 988 aa13.57□□□□□ -0.24
COL8A1-206ENST00000474648 POLKQ9UBT6 870 aa13.57□□□□□ -0.24
COL8A1-206ENST00000474648 ZBTB12Q9Y330 459 aaPredicted RBP13.57□□□□□ -0.24
COL8A1-206ENST00000474648 SOX12O15370 315 aa13.56□□□□□ -0.24
COL8A1-206ENST00000474648 MED1Q15648 1581 aaPredicted RBP13.56□□□□□ -0.24
COL8A1-206ENST00000474648 MYBBP1AQ9BQG0 1328 aaKnown RBP13.56□□□□□ -0.24
COL8A1-206ENST00000474648 MTHFSP49914 203 aa13.55□□□□□ -0.24
COL8A1-206ENST00000474648 RRS1Q15050 365 aaKnown RBP13.55□□□□□ -0.24
COL8A1-206ENST00000474648 ARHGEF25Q86VW2 580 aa13.55□□□□□ -0.24
COL8A1-206ENST00000474648 PHLPP1O60346 1717 aa13.55□□□□□ -0.24
COL8A1-206ENST00000474648 SLIT3O75094 1523 aa13.54□□□□□ -0.24
COL8A1-206ENST00000474648 CCDC184Q52MB2 194 aa13.54□□□□□ -0.24
COL8A1-206ENST00000474648 EMILIN1Q9Y6C2 1016 aa13.54□□□□□ -0.24
COL8A1-206ENST00000474648 MAP3K19Q56UN5 1328 aa13.54□□□□□ -0.24
COL8A1-206ENST00000474648 JCADQ9P266 1359 aa13.54□□□□□ -0.24
COL8A1-206ENST00000474648 USP54Q70EL1 1684 aa13.53□□□□□ -0.24
COL8A1-206ENST00000474648 MARF1Q9Y4F3 1742 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms