RNA–Protein interactions for RNA: ENST00000474627.7

ATPAF2-206, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF2, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-206ENST00000474627 RGS17Q9UGC6 210 aaPredicted RBP27.19■■□□□ 1.94
ATPAF2-206ENST00000474627 HSPA5P11021 654 aaKnown RBP27.18■■□□□ 1.94
ATPAF2-206ENST00000474627 C8orf37Q96NL8 207 aa27.18■■□□□ 1.94
ATPAF2-206ENST00000474627 SLC12A5Q9H2X9 1139 aa27.18■■□□□ 1.94
ATPAF2-206ENST00000474627 HAP1P54257 671 aaPredicted RBP27.17■■□□□ 1.94
ATPAF2-206ENST00000474627 ZNF692Q9BU19 519 aaPredicted RBP27.17■■□□□ 1.94
ATPAF2-206ENST00000474627 USP6P35125 1406 aa27.16■■□□□ 1.94
ATPAF2-206ENST00000474627 ALS2Q96Q42 1657 aa27.16■■□□□ 1.94
ATPAF2-206ENST00000474627 NUTM2GQ5VZR2 741 aa27.14■■□□□ 1.94
ATPAF2-206ENST00000474627 ABTB2Q8N961 1025 aa27.14■■□□□ 1.93
ATPAF2-206ENST00000474627 NGLY1Q96IV0 654 aa27.14■■□□□ 1.93
ATPAF2-206ENST00000474627 BRD4O60885 1362 aaPredicted RBP27.13■■□□□ 1.93
ATPAF2-206ENST00000474627 CDCA8Q53HL2 280 aa27.13■■□□□ 1.93
ATPAF2-206ENST00000474627 CPSF1Q10570 1443 aaKnown RBP27.13■■□□□ 1.93
ATPAF2-206ENST00000474627 KTN1Q86UP2 1357 aaKnown RBP27.11■■□□□ 1.93
ATPAF2-206ENST00000474627 AFF2P51816 1311 aa27.11■■□□□ 1.93
ATPAF2-206ENST00000474627 HDGFL2Q7Z4V5 671 aaPredicted RBP27.09■■□□□ 1.93
ATPAF2-206ENST00000474627 TERF2IPQ9NYB0 399 aa27.09■■□□□ 1.93
ATPAF2-206ENST00000474627 SSH2Q76I76 1423 aa27.09■■□□□ 1.93
ATPAF2-206ENST00000474627 CD163L1Q9NR16 1453 aa27.09■■□□□ 1.93
ATPAF2-206ENST00000474627 NINLQ9Y2I6 1382 aa27.08■■□□□ 1.93
ATPAF2-206ENST00000474627 ZNF772Q68DY9 489 aaPredicted RBP27.08■■□□□ 1.93
ATPAF2-206ENST00000474627 POTEAQ6S8J7 498 aa27.08■■□□□ 1.93
ATPAF2-206ENST00000474627 TTC21BQ7Z4L5 1316 aa27.08■■□□□ 1.93
ATPAF2-206ENST00000474627 ILDR2Q71H61 639 aa27.07■■□□□ 1.92
ATPAF2-206ENST00000474627 AKAP12Q02952 1782 aa27.07■■□□□ 1.92
ATPAF2-206ENST00000474627 NLRP13Q86W25 1043 aa27.05■■□□□ 1.92
ATPAF2-206ENST00000474627 A0A1W2PP64 1363 aa27.05■■□□□ 1.92
ATPAF2-206ENST00000474627 ABCA3Q99758 1704 aa27.04■■□□□ 1.92
ATPAF2-206ENST00000474627 NLRP6P59044 892 aa27.04■■□□□ 1.92
ATPAF2-206ENST00000474627 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.04■■□□□ 1.92
ATPAF2-206ENST00000474627 FNBP4Q8N3X1 1017 aaPredicted RBP27.04■■□□□ 1.92
ATPAF2-206ENST00000474627 TTC21AQ8NDW8 1320 aa27.03■■□□□ 1.92
ATPAF2-206ENST00000474627 POLR3GLQ9BT43 218 aa27.02■■□□□ 1.92
ATPAF2-206ENST00000474627 USP21Q9UK80 565 aa27.02■■□□□ 1.92
ATPAF2-206ENST00000474627 MARF1Q9Y4F3 1742 aaKnown RBP27.01■■□□□ 1.91
ATPAF2-206ENST00000474627 MON2Q7Z3U7 1717 aa27■■□□□ 1.91
ATPAF2-206ENST00000474627 USP19O94966 1318 aa27■■□□□ 1.91
ATPAF2-206ENST00000474627 FAM83GA6ND36 823 aa27■■□□□ 1.91
ATPAF2-206ENST00000474627 CRYBG1Q9Y4K1 1723 aa26.99■■□□□ 1.91
ATPAF2-206ENST00000474627 NRKQ7Z2Y5 1582 aa26.99■■□□□ 1.91
ATPAF2-206ENST00000474627 ANKRD36BQ8N2N9 1353 aa26.99■■□□□ 1.91
ATPAF2-206ENST00000474627 QTRT2Q9H974 415 aaKnown RBP26.98■■□□□ 1.91
ATPAF2-206ENST00000474627 EDC4Q6P2E9 1401 aaKnown RBP26.98■■□□□ 1.91
ATPAF2-206ENST00000474627 ZC3H6P61129 1189 aaKnown RBP26.97■■□□□ 1.91
ATPAF2-206ENST00000474627 PIK3C2AO00443 1686 aa26.97■■□□□ 1.91
ATPAF2-206ENST00000474627 GCP02774 474 aa26.97■■□□□ 1.91
ATPAF2-206ENST00000474627 C11orf95C9JLR9 678 aaPredicted RBP26.96■■□□□ 1.91
ATPAF2-206ENST00000474627 NME9Q86XW9 330 aa26.96■■□□□ 1.91
ATPAF2-206ENST00000474627 PRDM11Q9NQV5 511 aa26.96■■□□□ 1.91
ATPAF2-206ENST00000474627 PHRF1Q9P1Y6 1649 aaKnown RBP26.96■■□□□ 1.91
ATPAF2-206ENST00000474627 BCL9LQ86UU0 1499 aa26.95■■□□□ 1.91
ATPAF2-206ENST00000474627 ZRANB1Q9UGI0 708 aa26.95■■□□□ 1.9
ATPAF2-206ENST00000474627 KIAA0232Q92628 1395 aa26.95■■□□□ 1.9
ATPAF2-206ENST00000474627 SLIT2O94813 1529 aa26.94■■□□□ 1.9
ATPAF2-206ENST00000474627 MIER1Q8N108 512 aa26.94■■□□□ 1.9
ATPAF2-206ENST00000474627 UNC5CLQ8IV45 518 aa26.92■■□□□ 1.9
ATPAF2-206ENST00000474627 TRPC5Q9UL62 973 aaPredicted RBP26.92■■□□□ 1.9
ATPAF2-206ENST00000474627 RXRBP28702 533 aa26.92■■□□□ 1.9
ATPAF2-206ENST00000474627 CHRNA2Q15822 529 aa26.92■■□□□ 1.9
ATPAF2-206ENST00000474627 MYOM1P52179 1685 aa26.9■■□□□ 1.9
ATPAF2-206ENST00000474627 BTG4Q9NY30 223 aa26.9■■□□□ 1.9
ATPAF2-206ENST00000474627 USP31Q70CQ4 1352 aa26.9■■□□□ 1.9
ATPAF2-206ENST00000474627 SOX12O15370 315 aa26.89■■□□□ 1.9
ATPAF2-206ENST00000474627 SLIT3O75094 1523 aa26.89■■□□□ 1.9
ATPAF2-206ENST00000474627 KCNH5Q8NCM2 988 aa26.88■■□□□ 1.89
ATPAF2-206ENST00000474627 CPDO75976 1380 aa26.88■■□□□ 1.89
ATPAF2-206ENST00000474627 ATRNO75882 1429 aa26.88■■□□□ 1.89
ATPAF2-206ENST00000474627 COL14A1Q05707 1796 aaKnown RBP26.88■■□□□ 1.89
ATPAF2-206ENST00000474627 ZBTB7CA1YPR0 619 aa26.88■■□□□ 1.89
ATPAF2-206ENST00000474627 RBM6P78332 1123 aaKnown RBP26.88■■□□□ 1.89
ATPAF2-206ENST00000474627 CARD14Q9BXL6 1004 aa26.88■■□□□ 1.89
ATPAF2-206ENST00000474627 PLCH1Q4KWH8 1693 aa26.87■■□□□ 1.89
ATPAF2-206ENST00000474627 KIF7Q2M1P5 1343 aa26.85■■□□□ 1.89
ATPAF2-206ENST00000474627 NWD2Q9ULI1 1742 aa26.84■■□□□ 1.89
ATPAF2-206ENST00000474627 GJD4Q96KN9 370 aaPredicted RBP26.83■■□□□ 1.89
ATPAF2-206ENST00000474627 NSD3Q9BZ95 1437 aa26.82■■□□□ 1.88
ATPAF2-206ENST00000474627 FYB1O15117 783 aa26.82■■□□□ 1.88
ATPAF2-206ENST00000474627 VPS72Q15906 364 aa26.82■■□□□ 1.88
ATPAF2-206ENST00000474627 COG3Q96JB2 828 aa26.82■■□□□ 1.88
ATPAF2-206ENST00000474627 CCDC9Q9Y3X0 531 aaKnown RBP26.82■■□□□ 1.88
ATPAF2-206ENST00000474627 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.82■■□□□ 1.88
ATPAF2-206ENST00000474627 OVOS2A0A0J9YW53 1432 aa26.81■■□□□ 1.88
ATPAF2-206ENST00000474627 OVOS2Q6IE36 1432 aa26.81■■□□□ 1.88
ATPAF2-206ENST00000474627 GGNBP2Q9H3C7 697 aa26.81■■□□□ 1.88
ATPAF2-206ENST00000474627 PANK3Q9H999 370 aa26.81■■□□□ 1.88
ATPAF2-206ENST00000474627 ARHGEF25Q86VW2 580 aa26.8■■□□□ 1.88
ATPAF2-206ENST00000474627 STRN4Q9NRL3 753 aa26.8■■□□□ 1.88
ATPAF2-206ENST00000474627 USP54Q70EL1 1684 aa26.79■■□□□ 1.88
ATPAF2-206ENST00000474627 NFAT5O94916 1531 aa26.78■■□□□ 1.88
ATPAF2-206ENST00000474627 EVA1CP58658 441 aa26.78■■□□□ 1.88
ATPAF2-206ENST00000474627 DDX10Q13206 875 aaKnown RBP26.78■■□□□ 1.88
ATPAF2-206ENST00000474627 AATKQ6ZMQ8 1374 aa26.78■■□□□ 1.88
ATPAF2-206ENST00000474627 NRAPQ86VF7 1730 aa26.77■■□□□ 1.88
ATPAF2-206ENST00000474627 CAMTA1Q9Y6Y1 1673 aa26.77■■□□□ 1.88
ATPAF2-206ENST00000474627 CDK12Q9NYV4 1490 aaPredicted RBP26.75■■□□□ 1.87
ATPAF2-206ENST00000474627 CCDC7Q96M83 1385 aa26.75■■□□□ 1.87
ATPAF2-206ENST00000474627 LMO7Q8WWI1 1683 aa26.74■■□□□ 1.87
ATPAF2-206ENST00000474627 CGNL1Q0VF96 1302 aa26.74■■□□□ 1.87
ATPAF2-206ENST00000474627 WASHC2AQ641Q2 1341 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms