RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 CRBNQ96SW2 442 aa10.29□□□□□ -0.76
CCDC93-208ENST00000474546 KNSTRNQ9Y448 316 aa10.29□□□□□ -0.76
CCDC93-208ENST00000474546 A2MP01023 1474 aa10.29□□□□□ -0.76
CCDC93-208ENST00000474546 ASXL1Q8IXJ9 1541 aa10.28□□□□□ -0.76
CCDC93-208ENST00000474546 DUOX2Q9NRD8 1548 aa10.28□□□□□ -0.76
CCDC93-208ENST00000474546 ADAMTS2O95450 1211 aa10.28□□□□□ -0.76
CCDC93-208ENST00000474546 GJD4Q96KN9 370 aaPredicted RBP10.28□□□□□ -0.76
CCDC93-208ENST00000474546 ZNF644Q9H582 1327 aaPredicted RBP10.28□□□□□ -0.76
CCDC93-208ENST00000474546 CADPS2Q86UW7 1296 aa10.27□□□□□ -0.77
CCDC93-208ENST00000474546 IL27Q8NEV9 243 aa10.27□□□□□ -0.77
CCDC93-208ENST00000474546 PMFBP1Q8TBY8 1022 aa10.27□□□□□ -0.77
CCDC93-208ENST00000474546 EID1Q9Y6B2 187 aa10.27□□□□□ -0.77
CCDC93-208ENST00000474546 MROH1Q8NDA8 1641 aa10.26□□□□□ -0.77
CCDC93-208ENST00000474546 NCOA3Q9Y6Q9 1424 aa10.26□□□□□ -0.77
CCDC93-208ENST00000474546 LTKP29376 864 aa10.26□□□□□ -0.77
CCDC93-208ENST00000474546 SLIT1O75093 1534 aa10.26□□□□□ -0.77
CCDC93-208ENST00000474546 ZNF521Q96K83 1311 aa10.26□□□□□ -0.77
CCDC93-208ENST00000474546 PNPLA6Q8IY17 1366 aa10.26□□□□□ -0.77
CCDC93-208ENST00000474546 UBR1Q8IWV7 1749 aa10.25□□□□□ -0.77
CCDC93-208ENST00000474546 KCNQ2O43526 872 aa10.25□□□□□ -0.77
CCDC93-208ENST00000474546 SAMD9LQ8IVG5 1584 aa10.25□□□□□ -0.77
CCDC93-208ENST00000474546 PTCH1Q13635 1447 aa10.24□□□□□ -0.77
CCDC93-208ENST00000474546 CDC42BPBQ9Y5S2 1711 aa10.24□□□□□ -0.77
CCDC93-208ENST00000474546 FAM83GA6ND36 823 aa10.24□□□□□ -0.77
CCDC93-208ENST00000474546 EN1Q05925 392 aaPredicted RBP10.24□□□□□ -0.77
CCDC93-208ENST00000474546 C8orf34Q49A92 452 aa10.24□□□□□ -0.77
CCDC93-208ENST00000474546 DUSP27Q5VZP5 1158 aa10.24□□□□□ -0.77
CCDC93-208ENST00000474546 TRMT2AQ8IZ69 625 aaKnown RBP10.24□□□□□ -0.77
CCDC93-208ENST00000474546 FRAT1Q92837 279 aaPredicted RBP10.24□□□□□ -0.77
CCDC93-208ENST00000474546 ANO8Q9HCE9 1232 aaPredicted RBP10.24□□□□□ -0.77
CCDC93-208ENST00000474546 SALL2Q9Y467 1007 aaPredicted RBP10.24□□□□□ -0.77
CCDC93-208ENST00000474546 SPAG9O60271 1321 aaKnown RBP10.24□□□□□ -0.77
CCDC93-208ENST00000474546 AATKQ6ZMQ8 1374 aa10.24□□□□□ -0.77
CCDC93-208ENST00000474546 CT47B1P0C2W7 299 aaPredicted RBP10.23□□□□□ -0.77
CCDC93-208ENST00000474546 SLFN5Q08AF3 891 aa10.23□□□□□ -0.77
CCDC93-208ENST00000474546 BRINP3Q76B58 766 aa10.23□□□□□ -0.77
CCDC93-208ENST00000474546 TESK2Q96S53 571 aa10.23□□□□□ -0.77
CCDC93-208ENST00000474546 ZNF777Q9ULD5 760 aaPredicted RBP10.23□□□□□ -0.77
CCDC93-208ENST00000474546 RGPD1P0DJD0 1748 aa10.23□□□□□ -0.77
CCDC93-208ENST00000474546 ATF3P18847 181 aa10.22□□□□□ -0.77
CCDC93-208ENST00000474546 CFAP44Q96MT7 982 aa10.22□□□□□ -0.77
CCDC93-208ENST00000474546 PANK3Q9H999 370 aa10.22□□□□□ -0.77
CCDC93-208ENST00000474546 DDX11L8A8MPP1 907 aa10.21□□□□□ -0.77
CCDC93-208ENST00000474546 KDM2AQ9Y2K7 1162 aa10.21□□□□□ -0.77
CCDC93-208ENST00000474546 DISP2A7MBM2 1401 aa10.21□□□□□ -0.78
CCDC93-208ENST00000474546 PPP2R1AP30153 589 aa10.2□□□□□ -0.78
CCDC93-208ENST00000474546 WWC3Q9ULE0 1092 aa10.2□□□□□ -0.78
CCDC93-208ENST00000474546 SBNO2Q9Y2G9 1366 aa10.2□□□□□ -0.78
CCDC93-208ENST00000474546 CEP152O94986 1710 aa10.19□□□□□ -0.78
CCDC93-208ENST00000474546 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.19□□□□□ -0.78
CCDC93-208ENST00000474546 TRPM2O94759 1503 aa10.19□□□□□ -0.78
CCDC93-208ENST00000474546 KANK1Q14678 1352 aa10.19□□□□□ -0.78
CCDC93-208ENST00000474546 SKOR2Q2VWA4 1001 aaPredicted RBP10.19□□□□□ -0.78
CCDC93-208ENST00000474546 CDCA7LQ96GN5 454 aa10.19□□□□□ -0.78
CCDC93-208ENST00000474546 CHMP4BQ9H444 224 aaKnown RBP10.19□□□□□ -0.78
CCDC93-208ENST00000474546 C19orf44Q9H6X5 657 aa10.19□□□□□ -0.78
CCDC93-208ENST00000474546 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.19□□□□□ -0.78
CCDC93-208ENST00000474546 POLR3AO14802 1390 aaPredicted RBP10.18□□□□□ -0.78
CCDC93-208ENST00000474546 CENPJQ9HC77 1338 aaPredicted RBP10.18□□□□□ -0.78
CCDC93-208ENST00000474546 GOLGA6L3A6NEY3 463 aa10.18□□□□□ -0.78
CCDC93-208ENST00000474546 RRP9O43818 475 aaKnown RBP10.18□□□□□ -0.78
CCDC93-208ENST00000474546 MRE11P49959 708 aa10.18□□□□□ -0.78
CCDC93-208ENST00000474546 APLP1P51693 650 aa10.18□□□□□ -0.78
CCDC93-208ENST00000474546 KRT27Q7Z3Y8 459 aa10.18□□□□□ -0.78
CCDC93-208ENST00000474546 CLUAP1Q96AJ1 413 aa10.18□□□□□ -0.78
CCDC93-208ENST00000474546 RWDD1Q9H446 243 aaPredicted RBP10.18□□□□□ -0.78
CCDC93-208ENST00000474546 BRPF3Q9ULD4 1205 aa10.18□□□□□ -0.78
CCDC93-208ENST00000474546 ADAMTS8Q9UP79 889 aa10.18□□□□□ -0.78
CCDC93-208ENST00000474546 SHANK3Q9BYB0 1731 aa10.17□□□□□ -0.78
CCDC93-208ENST00000474546 CANXP27824 592 aaKnown RBP10.17□□□□□ -0.78
CCDC93-208ENST00000474546 CC2D1BQ5T0F9 858 aaKnown RBP10.17□□□□□ -0.78
CCDC93-208ENST00000474546 C14orf37Q86TY3 774 aa10.17□□□□□ -0.78
CCDC93-208ENST00000474546 DNAJC5GQ8N7S2 189 aa10.17□□□□□ -0.78
CCDC93-208ENST00000474546 CIZ1Q9ULV3 898 aaPredicted RBP10.17□□□□□ -0.78
CCDC93-208ENST00000474546 PCNTO95613 3336 aa10.17□□□□□ -0.78
CCDC93-208ENST00000474546 KIF16BQ96L93 1317 aa10.16□□□□□ -0.78
CCDC93-208ENST00000474546 FRAT2O75474 233 aaPredicted RBP10.16□□□□□ -0.78
CCDC93-208ENST00000474546 CLCN1P35523 988 aa10.16□□□□□ -0.78
CCDC93-208ENST00000474546 CCDC27Q2M243 656 aa10.16□□□□□ -0.78
CCDC93-208ENST00000474546 AMER1Q5JTC6 1135 aaPredicted RBP10.16□□□□□ -0.78
CCDC93-208ENST00000474546 NBPF14Q5TI25 921 aa10.16□□□□□ -0.78
CCDC93-208ENST00000474546 WDR63Q8IWG1 891 aa10.16□□□□□ -0.78
CCDC93-208ENST00000474546 SEPT12Q8IYM1 358 aa10.16□□□□□ -0.78
CCDC93-208ENST00000474546 GLI3P10071 1580 aa10.16□□□□□ -0.78
CCDC93-208ENST00000474546 INO80Q9ULG1 1556 aaPredicted RBP10.16□□□□□ -0.78
CCDC93-208ENST00000474546 MYOM2P54296 1465 aa10.16□□□□□ -0.78
CCDC93-208ENST00000474546 TET3O43151 1660 aa10.15□□□□□ -0.78
CCDC93-208ENST00000474546 PLEKHH1Q9ULM0 1364 aa10.15□□□□□ -0.78
CCDC93-208ENST00000474546 USP32Q8NFA0 1604 aa10.15□□□□□ -0.78
CCDC93-208ENST00000474546 CHD2O14647 1828 aaKnown RBP10.15□□□□□ -0.78
CCDC93-208ENST00000474546 PLIN1O60240 522 aa10.15□□□□□ -0.78
CCDC93-208ENST00000474546 PUS7Q96PZ0 661 aaKnown RBP10.15□□□□□ -0.78
CCDC93-208ENST00000474546 PNNQ9H307 717 aaKnown RBP10.15□□□□□ -0.78
CCDC93-208ENST00000474546 CHMP5Q9NZZ3 219 aa10.15□□□□□ -0.78
CCDC93-208ENST00000474546 HNRNPMP52272 730 aaKnown RBP eCLIP10.14□□□□□ -0.79
CCDC93-208ENST00000474546 EZH2Q15910 746 aaKnown RBP10.14□□□□□ -0.79
CCDC93-208ENST00000474546 ANP32BQ92688 251 aaKnown RBP10.14□□□□□ -0.79
CCDC93-208ENST00000474546 TBC1D32Q96NH3 1257 aa10.14□□□□□ -0.79
CCDC93-208ENST00000474546 SLC26A8Q96RN1 970 aa10.14□□□□□ -0.79
CCDC93-208ENST00000474546 MYH16Q9H6N6 1097 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms