RNA–Protein interactions for RNA: ENST00000474394.5

RNF220-210, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 810 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-210ENST00000474394 EVC2Q86UK5 1308 aa15.25■□□□□ 0.03
RNF220-210ENST00000474394 PSDA5PKW4 1024 aaPredicted RBP15.25■□□□□ 0.03
RNF220-210ENST00000474394 ITSN1Q15811 1721 aa15.25■□□□□ 0.03
RNF220-210ENST00000474394 SBNO1A3KN83 1393 aa15.24■□□□□ 0.03
RNF220-210ENST00000474394 BRWD3Q6RI45 1802 aa15.24■□□□□ 0.03
RNF220-210ENST00000474394 CABP2Q9NPB3 220 aa15.24■□□□□ 0.03
RNF220-210ENST00000474394 TNS3Q68CZ2 1445 aa15.23■□□□□ 0.03
RNF220-210ENST00000474394 YY1P25490 414 aa15.22■□□□□ 0.03
RNF220-210ENST00000474394 SBNO2Q9Y2G9 1366 aa15.22■□□□□ 0.03
RNF220-210ENST00000474394 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.21■□□□□ 0.03
RNF220-210ENST00000474394 PLEKHG3A1L390 1219 aa15.21■□□□□ 0.03
RNF220-210ENST00000474394 LMOD2Q6P5Q4 547 aa15.21■□□□□ 0.03
RNF220-210ENST00000474394 ARHGEF10O15013 1369 aa15.21■□□□□ 0.02
RNF220-210ENST00000474394 TOPAZ1Q8N9V7 1692 aa15.2■□□□□ 0.02
RNF220-210ENST00000474394 UNC5CLQ8IV45 518 aa15.2■□□□□ 0.02
RNF220-210ENST00000474394 GLI3P10071 1580 aa15.19■□□□□ 0.02
RNF220-210ENST00000474394 ACEP12821 1306 aa15.19■□□□□ 0.02
RNF220-210ENST00000474394 PPIP5K1Q6PFW1 1433 aa15.19■□□□□ 0.02
RNF220-210ENST00000474394 POLR3AO14802 1390 aaPredicted RBP15.19■□□□□ 0.02
RNF220-210ENST00000474394 PAK3O75914 559 aaPredicted RBP15.18■□□□□ 0.02
RNF220-210ENST00000474394 HAP1P54257 671 aaPredicted RBP15.18■□□□□ 0.02
RNF220-210ENST00000474394 TRPM3Q9HCF6 1732 aaPredicted RBP15.17■□□□□ 0.02
RNF220-210ENST00000474394 SLC24A1O60721 1099 aa15.17■□□□□ 0.02
RNF220-210ENST00000474394 BAG6P46379 1132 aa15.17■□□□□ 0.02
RNF220-210ENST00000474394 SEPT12Q8IYM1 358 aa15.17■□□□□ 0.02
RNF220-210ENST00000474394 CABP1Q9NZU7 370 aa15.17■□□□□ 0.02
RNF220-210ENST00000474394 ST20-MTHFSA0A0A6YYL1 179 aa15.16■□□□□ 0.02
RNF220-210ENST00000474394 USP47Q96K76 1375 aa15.15■□□□□ 0.02
RNF220-210ENST00000474394 KRT27Q7Z3Y8 459 aa15.15■□□□□ 0.02
RNF220-210ENST00000474394 ALS2Q96Q42 1657 aa15.14■□□□□ 0.01
RNF220-210ENST00000474394 PLEKHG5O94827 1062 aa15.14■□□□□ 0.01
RNF220-210ENST00000474394 CABLES1Q8TDN4 633 aa15.14■□□□□ 0.01
RNF220-210ENST00000474394 BRD4O60885 1362 aaPredicted RBP15.13■□□□□ 0.01
RNF220-210ENST00000474394 SLIT2O94813 1529 aa15.13■□□□□ 0.01
RNF220-210ENST00000474394 ONECUT3O60422 494 aaPredicted RBP15.13■□□□□ 0.01
RNF220-210ENST00000474394 TESK2Q96S53 571 aa15.13■□□□□ 0.01
RNF220-210ENST00000474394 R3HDM1Q15032 1099 aaKnown RBP15.12■□□□□ 0.01
RNF220-210ENST00000474394 PUS7Q96PZ0 661 aaKnown RBP15.12■□□□□ 0.01
RNF220-210ENST00000474394 ZNF692Q9BU19 519 aaPredicted RBP15.12■□□□□ 0.01
RNF220-210ENST00000474394 USP6P35125 1406 aa15.1■□□□□ 0.01
RNF220-210ENST00000474394 ABTB2Q8N961 1025 aa15.1■□□□□ 0.01
RNF220-210ENST00000474394 TMF1P82094 1093 aa15.09■□□□□ 0.01
RNF220-210ENST00000474394 EN1Q05925 392 aaPredicted RBP15.09■□□□□ 0.01
RNF220-210ENST00000474394 VPS72Q15906 364 aa15.09■□□□□ 0.01
RNF220-210ENST00000474394 NUTM2GQ5VZR2 741 aa15.09■□□□□ 0.01
RNF220-210ENST00000474394 TMC1Q8TDI8 760 aa15.09■□□□□ 0.01
RNF220-210ENST00000474394 ABCA3Q99758 1704 aa15.09■□□□□ 0.01
RNF220-210ENST00000474394 NLRP13Q86W25 1043 aa15.08■□□□□ 0
RNF220-210ENST00000474394 CCDC9Q9Y3X0 531 aaKnown RBP15.07■□□□□ 0
RNF220-210ENST00000474394 CPSF1Q10570 1443 aaKnown RBP15.07■□□□□ 0
RNF220-210ENST00000474394 CDCA8Q53HL2 280 aa15.06■□□□□ 0
RNF220-210ENST00000474394 IFFO2Q5TF58 517 aa15.06■□□□□ 0
RNF220-210ENST00000474394 HDGFL2Q7Z4V5 671 aaPredicted RBP15.06■□□□□ 0
RNF220-210ENST00000474394 SLC12A5Q9H2X9 1139 aa15.06■□□□□ 0
RNF220-210ENST00000474394 KTN1Q86UP2 1357 aaKnown RBP15.06■□□□□ 0
RNF220-210ENST00000474394 SSH2Q76I76 1423 aa15.06■□□□□ 0
RNF220-210ENST00000474394 AKAP12Q02952 1782 aa15.06■□□□□ 0
RNF220-210ENST00000474394 TERF2IPQ9NYB0 399 aa15.05■□□□□ -0
RNF220-210ENST00000474394 TTC21BQ7Z4L5 1316 aa15.05■□□□□ -0
RNF220-210ENST00000474394 TTC21AQ8NDW8 1320 aa15.05■□□□□ -0
RNF220-210ENST00000474394 NINLQ9Y2I6 1382 aa15.05■□□□□ -0
RNF220-210ENST00000474394 RGPD1P0DJD0 1748 aa15.05■□□□□ -0
RNF220-210ENST00000474394 CRYBG1Q9Y4K1 1723 aa15.05■□□□□ -0
RNF220-210ENST00000474394 USP19O94966 1318 aa15.04■□□□□ -0
RNF220-210ENST00000474394 A0A0G2JS52 829 aa15.04■□□□□ -0
RNF220-210ENST00000474394 FAM83GA6ND36 823 aa15.04■□□□□ -0
RNF220-210ENST00000474394 DCAF8L1A6NGE4 600 aa15.04■□□□□ -0
RNF220-210ENST00000474394 NLRP6P59044 892 aa15.04■□□□□ -0
RNF220-210ENST00000474394 EIF4G2P78344 907 aaKnown RBP eCLIP15.04■□□□□ -0
RNF220-210ENST00000474394 MYT1Q01538 1121 aa15.04■□□□□ -0
RNF220-210ENST00000474394 PRDM11Q9NQV5 511 aa15.04■□□□□ -0
RNF220-210ENST00000474394 NWD2Q9ULI1 1742 aa15.03■□□□□ -0
RNF220-210ENST00000474394 PHRF1Q9P1Y6 1649 aaKnown RBP15.03■□□□□ -0
RNF220-210ENST00000474394 CD163L1Q9NR16 1453 aa15.01□□□□□ -0.01
RNF220-210ENST00000474394 COL14A1Q05707 1796 aaKnown RBP15.01□□□□□ -0.01
RNF220-210ENST00000474394 KIAA0232Q92628 1395 aa15.01□□□□□ -0.01
RNF220-210ENST00000474394 MON2Q7Z3U7 1717 aa15.01□□□□□ -0.01
RNF220-210ENST00000474394 PLCH1Q4KWH8 1693 aa15.01□□□□□ -0.01
RNF220-210ENST00000474394 GCP02774 474 aa15.01□□□□□ -0.01
RNF220-210ENST00000474394 ZC3H6P61129 1189 aaKnown RBP15.01□□□□□ -0.01
RNF220-210ENST00000474394 A0A1W2PP64 1363 aa15□□□□□ -0.01
RNF220-210ENST00000474394 HSPA5P11021 654 aaKnown RBP15□□□□□ -0.01
RNF220-210ENST00000474394 EZH2Q15910 746 aaKnown RBP15□□□□□ -0.01
RNF220-210ENST00000474394 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15□□□□□ -0.01
RNF220-210ENST00000474394 BTG4Q9NY30 223 aa15□□□□□ -0.01
RNF220-210ENST00000474394 DISP2A7MBM2 1401 aa15□□□□□ -0.01
RNF220-210ENST00000474394 EDC4Q6P2E9 1401 aaKnown RBP15□□□□□ -0.01
RNF220-210ENST00000474394 PIK3C2AO00443 1686 aa15□□□□□ -0.01
RNF220-210ENST00000474394 NRKQ7Z2Y5 1582 aa14.99□□□□□ -0.01
RNF220-210ENST00000474394 CHRNA2Q15822 529 aa14.99□□□□□ -0.01
RNF220-210ENST00000474394 FAM98CQ17RN3 349 aaKnown RBP14.99□□□□□ -0.01
RNF220-210ENST00000474394 CPDO75976 1380 aa14.98□□□□□ -0.01
RNF220-210ENST00000474394 UTRNP46939 3433 aa14.98□□□□□ -0.01
RNF220-210ENST00000474394 ANKRD36BQ8N2N9 1353 aa14.98□□□□□ -0.01
RNF220-210ENST00000474394 SLIT3O75094 1523 aa14.97□□□□□ -0.01
RNF220-210ENST00000474394 FAM182BQ5T319 152 aa14.97□□□□□ -0.01
RNF220-210ENST00000474394 KCNH5Q8NCM2 988 aa14.97□□□□□ -0.01
RNF220-210ENST00000474394 CAMKK2Q96RR4 588 aa14.97□□□□□ -0.01
RNF220-210ENST00000474394 TNS1Q9HBL0 1735 aaKnown RBP14.97□□□□□ -0.01
RNF220-210ENST00000474394 NME9Q86XW9 330 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms