RNA–Protein interactions for RNA: ENST00000474273.5

SSB-210, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-210ENST00000474273 AMHR2Q16671 573 aa11.03□□□□□ -0.64
SSB-210ENST00000474273 LORP23490 312 aaPredicted RBP11.02□□□□□ -0.65
SSB-210ENST00000474273 VEGFBP49765 207 aa11.02□□□□□ -0.65
SSB-210ENST00000474273 ZSCAN1Q8NBB4 408 aa11.02□□□□□ -0.65
SSB-210ENST00000474273 GJA5P36382 358 aa11□□□□□ -0.65
SSB-210ENST00000474273 MRPL14Q6P1L8 145 aaKnown RBP11□□□□□ -0.65
SSB-210ENST00000474273 GIGYF2Q6Y7W6 1299 aaKnown RBP11□□□□□ -0.65
SSB-210ENST00000474273 BARGINQ6ZT62 677 aa11□□□□□ -0.65
SSB-210ENST00000474273 ADH1CP00326 375 aa10.99□□□□□ -0.65
SSB-210ENST00000474273 TIMP2P16035 220 aa10.99□□□□□ -0.65
SSB-210ENST00000474273 ERBB4Q15303 1308 aa10.99□□□□□ -0.65
SSB-210ENST00000474273 WDR4P57081 412 aaKnown RBP10.98□□□□□ -0.65
SSB-210ENST00000474273 LYPD8Q6UX82 237 aa10.98□□□□□ -0.65
SSB-210ENST00000474273 BEGAINQ9BUH8 593 aa10.98□□□□□ -0.65
SSB-210ENST00000474273 ZMYND10O75800 440 aa10.97□□□□□ -0.65
SSB-210ENST00000474273 CTHP32929 405 aa10.97□□□□□ -0.65
SSB-210ENST00000474273 SCARF1Q14162 830 aa10.97□□□□□ -0.65
SSB-210ENST00000474273 FAM174AQ8TBP5 190 aa10.97□□□□□ -0.65
SSB-210ENST00000474273 DIXDC1Q155Q3 683 aa10.96□□□□□ -0.65
SSB-210ENST00000474273 RSBN1LQ6PCB5 846 aaPredicted RBP10.96□□□□□ -0.65
SSB-210ENST00000474273 KLF16Q9BXK1 252 aaPredicted RBP10.96□□□□□ -0.65
SSB-210ENST00000474273 TBC1D2Q9BYX2 928 aa10.96□□□□□ -0.65
SSB-210ENST00000474273 PURBQ96QR8 312 aaKnown RBP10.95□□□□□ -0.66
SSB-210ENST00000474273 CDK15Q96Q40 435 aa10.94□□□□□ -0.66
SSB-210ENST00000474273 CFAP99D6REC4 459 aa10.93□□□□□ -0.66
SSB-210ENST00000474273 F12P00748 615 aaPredicted RBP10.93□□□□□ -0.66
SSB-210ENST00000474273 PCDHB15Q9Y5E8 787 aa10.93□□□□□ -0.66
SSB-210ENST00000474273 SPTLC1O15269 473 aa10.92□□□□□ -0.66
SSB-210ENST00000474273 FOXJ1Q92949 421 aa10.92□□□□□ -0.66
SSB-210ENST00000474273 VSIG8P0DPA2 414 aa10.91□□□□□ -0.66
SSB-210ENST00000474273 ZBTB3Q9H5J0 574 aa10.91□□□□□ -0.66
SSB-210ENST00000474273 MAP10Q9P2G4 905 aa10.91□□□□□ -0.66
SSB-210ENST00000474273 SOBPA7XYQ1 873 aa10.9□□□□□ -0.66
SSB-210ENST00000474273 HRCP23327 699 aa10.9□□□□□ -0.66
SSB-210ENST00000474273 ZC3H15Q8WU90 426 aaKnown RBP10.9□□□□□ -0.66
SSB-210ENST00000474273 ZIC2O95409 532 aaPredicted RBP10.89□□□□□ -0.67
SSB-210ENST00000474273 NR5A1Q13285 461 aa10.89□□□□□ -0.67
SSB-210ENST00000474273 ARID5BQ14865 1188 aa10.89□□□□□ -0.67
SSB-210ENST00000474273 PRPF38BQ5VTL8 546 aaKnown RBP10.89□□□□□ -0.67
SSB-210ENST00000474273 PARP9Q8IXQ6 854 aa10.89□□□□□ -0.67
SSB-210ENST00000474273 ZFAND3Q9H8U3 227 aa10.89□□□□□ -0.67
SSB-210ENST00000474273 ITPKCQ96DU7 683 aa10.87□□□□□ -0.67
SSB-210ENST00000474273 NR3C2P08235 984 aa10.86□□□□□ -0.67
SSB-210ENST00000474273 C4orf48Q5BLP8 95 aa10.86□□□□□ -0.67
SSB-210ENST00000474273 RIC3Q7Z5B4 369 aa10.86□□□□□ -0.67
SSB-210ENST00000474273 BPHLQ86WA6 291 aaPredicted RBP10.86□□□□□ -0.67
SSB-210ENST00000474273 GRM5P41594 1212 aa10.85□□□□□ -0.67
SSB-210ENST00000474273 AGERQ15109 404 aa10.85□□□□□ -0.67
SSB-210ENST00000474273 MAN1A2O60476 641 aa10.84□□□□□ -0.67
SSB-210ENST00000474273 C6orf118Q5T5N4 469 aa10.84□□□□□ -0.67
SSB-210ENST00000474273 CABLES1Q8TDN4 633 aa10.84□□□□□ -0.67
SSB-210ENST00000474273 PER1O15534 1290 aaPredicted RBP10.83□□□□□ -0.68
SSB-210ENST00000474273 TRIM66O15016 1216 aa10.82□□□□□ -0.68
SSB-210ENST00000474273 MEIOBQ8N635 442 aa10.82□□□□□ -0.68
SSB-210ENST00000474273 UPP2O95045 317 aa10.81□□□□□ -0.68
SSB-210ENST00000474273 CSPP1Q1MSJ5 1256 aa10.81□□□□□ -0.68
SSB-210ENST00000474273 LINC00528Q8N1L1 170 aa10.81□□□□□ -0.68
SSB-210ENST00000474273 ARMC2Q8NEN0 867 aa10.81□□□□□ -0.68
SSB-210ENST00000474273 C1QTNF2Q9BXJ5 285 aa10.81□□□□□ -0.68
SSB-210ENST00000474273 BMP2P12643 396 aa10.8□□□□□ -0.68
SSB-210ENST00000474273 PPFIA3O75145 1194 aa10.79□□□□□ -0.68
SSB-210ENST00000474273 TUSC1Q2TAM9 212 aa10.79□□□□□ -0.68
SSB-210ENST00000474273 SH3RF1Q7Z6J0 888 aa10.79□□□□□ -0.68
SSB-210ENST00000474273 MAP4K5Q9Y4K4 846 aa10.79□□□□□ -0.68
SSB-210ENST00000474273 TSC1Q92574 1164 aa10.78□□□□□ -0.68
SSB-210ENST00000474273 SOS2Q07890 1332 aaPredicted RBP10.78□□□□□ -0.68
SSB-210ENST00000474273 NBPF14Q5TI25 921 aa10.77□□□□□ -0.69
SSB-210ENST00000474273 AK7Q96M32 723 aa10.77□□□□□ -0.69
SSB-210ENST00000474273 LIMD1Q9UGP4 676 aa10.77□□□□□ -0.69
SSB-210ENST00000474273 NUTM2BA6NNL0 878 aaPredicted RBP10.76□□□□□ -0.69
SSB-210ENST00000474273 NUTM2EB1AL46 878 aaPredicted RBP10.76□□□□□ -0.69
SSB-210ENST00000474273 FSHRP23945 695 aa10.76□□□□□ -0.69
SSB-210ENST00000474273 QPCTQ16769 361 aa10.76□□□□□ -0.69
SSB-210ENST00000474273 NUTM2DQ5VT03 806 aaPredicted RBP10.76□□□□□ -0.69
SSB-210ENST00000474273 MYSM1Q5VVJ2 828 aa10.76□□□□□ -0.69
SSB-210ENST00000474273 NUTM2AQ8IVF1 878 aaPredicted RBP10.76□□□□□ -0.69
SSB-210ENST00000474273 TRMT44Q8IYL2 757 aaKnown RBP10.76□□□□□ -0.69
SSB-210ENST00000474273 DNMT3LQ9UJW3 386 aa10.76□□□□□ -0.69
SSB-210ENST00000474273 LILRB3O75022 631 aa10.75□□□□□ -0.69
SSB-210ENST00000474273 SH3BP5LQ7L8J4 393 aa10.75□□□□□ -0.69
SSB-210ENST00000474273 VASH1Q7L8A9 365 aaPredicted RBP10.74□□□□□ -0.69
SSB-210ENST00000474273 TSEN34Q9BSV6 310 aaKnown RBP10.74□□□□□ -0.69
SSB-210ENST00000474273 EMILIN1Q9Y6C2 1016 aa10.74□□□□□ -0.69
SSB-210ENST00000474273 HELBQ8NG08 1087 aaPredicted RBP10.73□□□□□ -0.69
SSB-210ENST00000474273 CCDC116Q8IYX3 515 aa10.72□□□□□ -0.69
SSB-210ENST00000474273 MAGEB6P1A0A0J9YX57 407 aa10.71□□□□□ -0.69
SSB-210ENST00000474273 GPKOWQ92917 476 aaPredicted RBP eCLIP10.71□□□□□ -0.692e-20■□□□□ 8.1
SSB-210ENST00000474273 KCNMA1Q12791 1236 aa10.7□□□□□ -0.7
SSB-210ENST00000474273 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.7□□□□□ -0.71e-6■□□□□ 10.6
SSB-210ENST00000474273 RTL5Q5HYW3 569 aaPredicted RBP10.69□□□□□ -0.7
SSB-210ENST00000474273 LOC100996750A0A140TA64 210 aa10.68□□□□□ -0.7
SSB-210ENST00000474273 TTLL8A6PVC2 850 aa10.68□□□□□ -0.7
SSB-210ENST00000474273 PDE4DQ08499 809 aa10.68□□□□□ -0.7
SSB-210ENST00000474273 KRTAP4-6Q9BYQ5 205 aa10.68□□□□□ -0.7
SSB-210ENST00000474273 SLC24A1O60721 1099 aa10.67□□□□□ -0.7
SSB-210ENST00000474273 KRT76Q01546 638 aa10.67□□□□□ -0.7
SSB-210ENST00000474273 ERFEQ4G0M1 354 aa10.67□□□□□ -0.7
SSB-210ENST00000474273 CARD14Q9BXL6 1004 aa10.67□□□□□ -0.7
SSB-210ENST00000474273 CLK2P49760 499 aaKnown RBP10.66□□□□□ -0.7
SSB-210ENST00000474273 GSK3AP49840 483 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms