RNA–Protein interactions for RNA: ENST00000472947.5

NMD3-206, Transcript of NMD3 ribosome export adaptor, humanhuman

TSL 1 (best) BASIC

Gene NMD3, Length 2,378 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3-206ENST00000472947 RRS1Q15050 365 aaKnown RBP14.33□□□□□ -0.11
NMD3-206ENST00000472947 PLEKHG1Q9ULL1 1385 aa14.33□□□□□ -0.12
NMD3-206ENST00000472947 CPS1P31327 1500 aa14.33□□□□□ -0.12
NMD3-206ENST00000472947 COL3A1P02461 1466 aaPredicted RBP14.33□□□□□ -0.12
NMD3-206ENST00000472947 NKTRP30414 1462 aaKnown RBP14.33□□□□□ -0.12
NMD3-206ENST00000472947 RBM33Q96EV2 1170 aaKnown RBP14.33□□□□□ -0.12
NMD3-206ENST00000472947 ANKRD26Q9UPS8 1709 aa14.33□□□□□ -0.12
NMD3-206ENST00000472947 BCL2L13Q9BXK5 485 aa14.32□□□□□ -0.12
NMD3-206ENST00000472947 MAP2P11137 1827 aaKnown RBP14.32□□□□□ -0.12
NMD3-206ENST00000472947 TECPR2O15040 1411 aa14.32□□□□□ -0.12
NMD3-206ENST00000472947 CPSF1Q10570 1443 aaKnown RBP14.32□□□□□ -0.12
NMD3-206ENST00000472947 FAM135BQ49AJ0 1406 aa14.32□□□□□ -0.12
NMD3-206ENST00000472947 DIAPH1O60610 1272 aaKnown RBP14.32□□□□□ -0.12
NMD3-206ENST00000472947 PLEKHF1Q96S99 279 aa14.32□□□□□ -0.12
NMD3-206ENST00000472947 SOX12O15370 315 aa14.31□□□□□ -0.12
NMD3-206ENST00000472947 HMOX1P09601 288 aa14.31□□□□□ -0.12
NMD3-206ENST00000472947 ATP7BP35670 1465 aa14.31□□□□□ -0.12
NMD3-206ENST00000472947 KNDC1Q76NI1 1749 aa14.31□□□□□ -0.12
NMD3-206ENST00000472947 PMFBP1Q8TBY8 1022 aa14.31□□□□□ -0.12
NMD3-206ENST00000472947 TSR2Q969E8 191 aaKnown RBP14.31□□□□□ -0.12
NMD3-206ENST00000472947 TNNQ9UQP3 1299 aa14.3□□□□□ -0.12
NMD3-206ENST00000472947 THEMISQ8N1K5 641 aaPredicted RBP14.29□□□□□ -0.12
NMD3-206ENST00000472947 ACEP12821 1306 aa14.29□□□□□ -0.12
NMD3-206ENST00000472947 MED14O60244 1454 aa14.29□□□□□ -0.12
NMD3-206ENST00000472947 TMPOP42166 694 aaKnown RBP14.29□□□□□ -0.12
NMD3-206ENST00000472947 FRAT1Q92837 279 aaPredicted RBP14.29□□□□□ -0.12
NMD3-206ENST00000472947 SIRT1Q96EB6 747 aa14.29□□□□□ -0.12
NMD3-206ENST00000472947 EDC4Q6P2E9 1401 aaKnown RBP14.28□□□□□ -0.12
NMD3-206ENST00000472947 TRIM35Q9UPQ4 493 aa14.28□□□□□ -0.12
NMD3-206ENST00000472947 PANK1Q8TE04 598 aa14.27□□□□□ -0.13
NMD3-206ENST00000472947 PHACTR3Q96KR7 559 aa14.27□□□□□ -0.13
NMD3-206ENST00000472947 MAPK8IP3Q9UPT6 1336 aa14.27□□□□□ -0.13
NMD3-206ENST00000472947 CDC42BPGQ6DT37 1551 aa14.27□□□□□ -0.13
NMD3-206ENST00000472947 PNPLA6Q8IY17 1366 aa14.27□□□□□ -0.13
NMD3-206ENST00000472947 RIMS1Q86UR5 1692 aaKnown RBP14.27□□□□□ -0.13
NMD3-206ENST00000472947 ARHGAP23Q9P227 1491 aa14.26□□□□□ -0.13
NMD3-206ENST00000472947 KCNA6P17658 529 aa14.26□□□□□ -0.13
NMD3-206ENST00000472947 PRKAR2BP31323 418 aa14.26□□□□□ -0.13
NMD3-206ENST00000472947 COG3Q96JB2 828 aa14.26□□□□□ -0.13
NMD3-206ENST00000472947 SLIT1O75093 1534 aa14.26□□□□□ -0.13
NMD3-206ENST00000472947 RIPK4P57078 832 aa14.26□□□□□ -0.13
NMD3-206ENST00000472947 WDR63Q8IWG1 891 aa14.25□□□□□ -0.13
NMD3-206ENST00000472947 THUMPD2Q9BTF0 503 aaKnown RBP14.25□□□□□ -0.13
NMD3-206ENST00000472947 TBX22Q9Y458 520 aa14.25□□□□□ -0.13
NMD3-206ENST00000472947 RGPD8O14715 1765 aaPredicted RBP14.25□□□□□ -0.13
NMD3-206ENST00000472947 NGEFQ8N5V2 710 aa14.25□□□□□ -0.13
NMD3-206ENST00000472947 RARSP54136 660 aaKnown RBP14.24□□□□□ -0.13
NMD3-206ENST00000472947 ADGRB2O60241 1585 aa14.24□□□□□ -0.13
NMD3-206ENST00000472947 AKAP12Q02952 1782 aa14.24□□□□□ -0.13
NMD3-206ENST00000472947 ITSN1Q15811 1721 aa14.24□□□□□ -0.13
NMD3-206ENST00000472947 MON2Q7Z3U7 1717 aa14.24□□□□□ -0.13
NMD3-206ENST00000472947 TTC21BQ7Z4L5 1316 aa14.24□□□□□ -0.13
NMD3-206ENST00000472947 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.24□□□□□ -0.13
NMD3-206ENST00000472947 RSPH6AQ9H0K4 717 aa14.24□□□□□ -0.13
NMD3-206ENST00000472947 COG6Q9Y2V7 657 aa14.24□□□□□ -0.13
NMD3-206ENST00000472947 CANXP27824 592 aaKnown RBP14.23□□□□□ -0.13
NMD3-206ENST00000472947 CCDC27Q2M243 656 aa14.23□□□□□ -0.13
NMD3-206ENST00000472947 CLUAP1Q96AJ1 413 aa14.23□□□□□ -0.13
NMD3-206ENST00000472947 MSH5O43196 834 aa14.23□□□□□ -0.13
NMD3-206ENST00000472947 IL13P35225 146 aa14.23□□□□□ -0.13
NMD3-206ENST00000472947 LRRC7Q96NW7 1537 aa14.22□□□□□ -0.13
NMD3-206ENST00000472947 FANCIQ9NVI1 1328 aa14.22□□□□□ -0.13
NMD3-206ENST00000472947 EXOSC9Q06265 439 aaKnown RBP14.22□□□□□ -0.13
NMD3-206ENST00000472947 NUTM2GQ5VZR2 741 aa14.22□□□□□ -0.13
NMD3-206ENST00000472947 LAS1LQ9Y4W2 734 aaKnown RBP14.22□□□□□ -0.13
NMD3-206ENST00000472947 RLBP1P12271 317 aa14.22□□□□□ -0.13
NMD3-206ENST00000472947 ZNF692Q9BU19 519 aaPredicted RBP14.22□□□□□ -0.13
NMD3-206ENST00000472947 CEP170BQ9Y4F5 1589 aaPredicted RBP14.21□□□□□ -0.14
NMD3-206ENST00000472947 AEBP1Q8IUX7 1158 aa14.2□□□□□ -0.14
NMD3-206ENST00000472947 PLEKHG3A1L390 1219 aa14.2□□□□□ -0.14
NMD3-206ENST00000472947 FCHSD2O94868 740 aa14.2□□□□□ -0.14
NMD3-206ENST00000472947 NGDNQ8NEJ9 315 aaKnown RBP14.2□□□□□ -0.14
NMD3-206ENST00000472947 MYH16Q9H6N6 1097 aa14.19□□□□□ -0.14
NMD3-206ENST00000472947 USP6P35125 1406 aa14.19□□□□□ -0.14
NMD3-206ENST00000472947 HSP90AB2PQ58FF8 381 aa14.19□□□□□ -0.14
NMD3-206ENST00000472947 FAM83GA6ND36 823 aa14.18□□□□□ -0.14
NMD3-206ENST00000472947 KDM2BQ8NHM5 1336 aa14.18□□□□□ -0.14
NMD3-206ENST00000472947 TOPAZ1Q8N9V7 1692 aa14.18□□□□□ -0.14
NMD3-206ENST00000472947 DCTN1Q14203 1278 aa14.18□□□□□ -0.14
NMD3-206ENST00000472947 DIP2AQ14689 1571 aa14.18□□□□□ -0.14
NMD3-206ENST00000472947 IGHDP01880 384 aa14.17□□□□□ -0.14
NMD3-206ENST00000472947 PLEKHG5O94827 1062 aa14.17□□□□□ -0.14
NMD3-206ENST00000472947 EIF4A2Q14240 407 aaKnown RBP14.17□□□□□ -0.14
NMD3-206ENST00000472947 ANKLE2Q86XL3 938 aa14.16□□□□□ -0.14
NMD3-206ENST00000472947 AATKQ6ZMQ8 1374 aa14.16□□□□□ -0.14
NMD3-206ENST00000472947 NRKQ7Z2Y5 1582 aa14.15□□□□□ -0.14
NMD3-206ENST00000472947 CDK12Q9NYV4 1490 aaPredicted RBP14.15□□□□□ -0.14
NMD3-206ENST00000472947 ELL2O00472 640 aaPredicted RBP14.15□□□□□ -0.14
NMD3-206ENST00000472947 TCERG1O14776 1098 aaKnown RBP14.15□□□□□ -0.14
NMD3-206ENST00000472947 SSH1Q8WYL5 1049 aa14.15□□□□□ -0.14
NMD3-206ENST00000472947 PTCH1Q13635 1447 aa14.15□□□□□ -0.14
NMD3-206ENST00000472947 NFE2L2Q16236 605 aa14.15□□□□□ -0.14
NMD3-206ENST00000472947 SULT6B1Q6IMI4 303 aa14.15□□□□□ -0.14
NMD3-206ENST00000472947 XRN1Q8IZH2 1706 aaKnown RBP14.14□□□□□ -0.15
NMD3-206ENST00000472947 OVOS2A0A0J9YW53 1432 aa14.14□□□□□ -0.15
NMD3-206ENST00000472947 OVOS2Q6IE36 1432 aa14.14□□□□□ -0.15
NMD3-206ENST00000472947 PAK3O75914 559 aaPredicted RBP14.14□□□□□ -0.15
NMD3-206ENST00000472947 SMC4Q9NTJ3 1288 aa14.14□□□□□ -0.15
NMD3-206ENST00000472947 NEFMP07197 916 aa14.14□□□□□ -0.15
NMD3-206ENST00000472947 PDE3AQ14432 1141 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms