RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 CCDC9Q9Y3X0 531 aaKnown RBP13.53□□□□□ -0.24
APTX-216ENST00000472896 PPLO60437 1756 aa13.53□□□□□ -0.24
APTX-216ENST00000472896 ZBED9Q6R2W3 1325 aa13.52□□□□□ -0.25
APTX-216ENST00000472896 CCDC136Q96JN2 1154 aa13.52□□□□□ -0.25
APTX-216ENST00000472896 USP32Q8NFA0 1604 aa13.52□□□□□ -0.25
APTX-216ENST00000472896 HAP1P54257 671 aaPredicted RBP13.51□□□□□ -0.25
APTX-216ENST00000472896 B4GALNT3Q6L9W6 998 aa13.51□□□□□ -0.25
APTX-216ENST00000472896 ABCC11Q96J66 1382 aa13.51□□□□□ -0.25
APTX-216ENST00000472896 BAG6P46379 1132 aa13.5□□□□□ -0.25
APTX-216ENST00000472896 EN1Q05925 392 aaPredicted RBP13.5□□□□□ -0.25
APTX-216ENST00000472896 FAM182BQ5T319 152 aa13.5□□□□□ -0.25
APTX-216ENST00000472896 IL27Q8NEV9 243 aa13.5□□□□□ -0.25
APTX-216ENST00000472896 TECPR2O15040 1411 aa13.5□□□□□ -0.25
APTX-216ENST00000472896 TONSLQ96HA7 1378 aa13.5□□□□□ -0.25
APTX-216ENST00000472896 RGL3Q3MIN7 710 aa13.5□□□□□ -0.25
APTX-216ENST00000472896 PHF8Q9UPP1 1060 aa13.5□□□□□ -0.25
APTX-216ENST00000472896 CCDC144AA2RUR9 1427 aa13.5□□□□□ -0.25
APTX-216ENST00000472896 FAM98CQ17RN3 349 aaKnown RBP13.49□□□□□ -0.25
APTX-216ENST00000472896 SLC4A1APQ9BWU0 796 aaKnown RBP13.49□□□□□ -0.25
APTX-216ENST00000472896 PSME1Q06323 249 aa13.48□□□□□ -0.25
APTX-216ENST00000472896 R3HDM1Q15032 1099 aaKnown RBP13.48□□□□□ -0.25
APTX-216ENST00000472896 LMOD2Q6P5Q4 547 aa13.48□□□□□ -0.25
APTX-216ENST00000472896 FMN2Q9NZ56 1722 aa13.48□□□□□ -0.25
APTX-216ENST00000472896 TNS3Q68CZ2 1445 aa13.48□□□□□ -0.25
APTX-216ENST00000472896 A0A0G2JS52 829 aa13.48□□□□□ -0.25
APTX-216ENST00000472896 RGPD8O14715 1765 aaPredicted RBP13.47□□□□□ -0.25
APTX-216ENST00000472896 PPM1GO15355 546 aaPredicted RBP13.47□□□□□ -0.25
APTX-216ENST00000472896 PLCH1Q4KWH8 1693 aa13.47□□□□□ -0.25
APTX-216ENST00000472896 SBNO1A3KN83 1393 aa13.45□□□□□ -0.26
APTX-216ENST00000472896 NWD2Q9ULI1 1742 aa13.45□□□□□ -0.26
APTX-216ENST00000472896 KIF1AQ12756 1690 aa13.45□□□□□ -0.26
APTX-216ENST00000472896 SIRT1Q96EB6 747 aa13.45□□□□□ -0.26
APTX-216ENST00000472896 HIRIP3Q9BW71 556 aaPredicted RBP13.45□□□□□ -0.26
APTX-216ENST00000472896 BTG4Q9NY30 223 aa13.45□□□□□ -0.26
APTX-216ENST00000472896 SMG6Q86US8 1419 aaKnown RBP13.45□□□□□ -0.26
APTX-216ENST00000472896 EZH2Q15910 746 aaKnown RBP13.44□□□□□ -0.26
APTX-216ENST00000472896 PMFBP1Q8TBY8 1022 aa13.44□□□□□ -0.26
APTX-216ENST00000472896 YTHDC2Q9H6S0 1430 aaKnown RBP13.44□□□□□ -0.26
APTX-216ENST00000472896 RNF123Q5XPI4 1314 aa13.44□□□□□ -0.26
APTX-216ENST00000472896 SPATA31E1Q6ZUB1 1445 aa13.43□□□□□ -0.26
APTX-216ENST00000472896 SAFB2Q14151 953 aaKnown RBP eCLIP13.43□□□□□ -0.26
APTX-216ENST00000472896 ABCA3Q99758 1704 aa13.42□□□□□ -0.26
APTX-216ENST00000472896 CAMKK2Q96RR4 588 aa13.42□□□□□ -0.26
APTX-216ENST00000472896 NRXN1Q9ULB1 1477 aa13.42□□□□□ -0.26
APTX-216ENST00000472896 KNDC1Q76NI1 1749 aa13.42□□□□□ -0.26
APTX-216ENST00000472896 ARHGEF10O15013 1369 aa13.41□□□□□ -0.26
APTX-216ENST00000472896 ANKRD30BQ9BXX2 1392 aa13.41□□□□□ -0.26
APTX-216ENST00000472896 C14orf93Q9H972 538 aaKnown RBP13.41□□□□□ -0.26
APTX-216ENST00000472896 SPATA31A5Q5VU36 1347 aa13.41□□□□□ -0.26
APTX-216ENST00000472896 SPATA31A7Q8IWB4 1347 aa13.41□□□□□ -0.26
APTX-216ENST00000472896 PIK3C2GO75747 1445 aa13.41□□□□□ -0.26
APTX-216ENST00000472896 NRAPQ86VF7 1730 aa13.41□□□□□ -0.26
APTX-216ENST00000472896 CFAP70Q5T0N1 1121 aa13.4□□□□□ -0.26
APTX-216ENST00000472896 PRAM1Q96QH2 718 aa13.4□□□□□ -0.26
APTX-216ENST00000472896 IFT172Q9UG01 1749 aa13.4□□□□□ -0.27
APTX-216ENST00000472896 TRIM37O94972 964 aa13.39□□□□□ -0.27
APTX-216ENST00000472896 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.39□□□□□ -0.27
APTX-216ENST00000472896 DISP2A7MBM2 1401 aa13.39□□□□□ -0.27
APTX-216ENST00000472896 NEFMP07197 916 aa13.38□□□□□ -0.27
APTX-216ENST00000472896 RTN4Q9NQC3 1192 aaKnown RBP13.38□□□□□ -0.27
APTX-216ENST00000472896 RGPD1P0DJD0 1748 aa13.38□□□□□ -0.27
APTX-216ENST00000472896 YY1P25490 414 aa13.37□□□□□ -0.27
APTX-216ENST00000472896 RSPH6AQ9H0K4 717 aa13.37□□□□□ -0.27
APTX-216ENST00000472896 TCERG1O14776 1098 aaKnown RBP13.36□□□□□ -0.27
APTX-216ENST00000472896 TNS1Q9HBL0 1735 aaKnown RBP13.36□□□□□ -0.27
APTX-216ENST00000472896 PRR36Q9H6K5 1346 aa13.35□□□□□ -0.27
APTX-216ENST00000472896 APBA3O96018 575 aa13.35□□□□□ -0.27
APTX-216ENST00000472896 MPHOSPH9Q99550 1183 aa13.35□□□□□ -0.27
APTX-216ENST00000472896 NUDCQ9Y266 331 aa13.35□□□□□ -0.27
APTX-216ENST00000472896 TRPM3Q9HCF6 1732 aaPredicted RBP13.35□□□□□ -0.27
APTX-216ENST00000472896 COL14A1Q05707 1796 aaKnown RBP13.35□□□□□ -0.27
APTX-216ENST00000472896 THSD7AQ9UPZ6 1657 aa13.35□□□□□ -0.27
APTX-216ENST00000472896 PRKRIP1Q9H875 184 aaPredicted RBP13.35□□□□□ -0.27
APTX-216ENST00000472896 POGKQ9P215 609 aa13.35□□□□□ -0.27
APTX-216ENST00000472896 SPATA31A1Q5TZJ5 1347 aa13.34□□□□□ -0.27
APTX-216ENST00000472896 MS4A1P11836 297 aa13.34□□□□□ -0.27
APTX-216ENST00000472896 FAM196AQ6ZSG2 479 aa13.34□□□□□ -0.27
APTX-216ENST00000472896 CHRNA2Q15822 529 aa13.33□□□□□ -0.28
APTX-216ENST00000472896 DDRGK1Q96HY6 314 aa13.33□□□□□ -0.28
APTX-216ENST00000472896 MRS2Q9HD23 443 aa13.33□□□□□ -0.28
APTX-216ENST00000472896 PRDM11Q9NQV5 511 aa13.33□□□□□ -0.28
APTX-216ENST00000472896 ALS2Q96Q42 1657 aa13.33□□□□□ -0.28
APTX-216ENST00000472896 ANKARQ7Z5J8 1434 aa13.33□□□□□ -0.28
APTX-216ENST00000472896 GSE1Q14687 1217 aa13.32□□□□□ -0.28
APTX-216ENST00000472896 GPRASP1Q5JY77 1395 aa13.32□□□□□ -0.28
APTX-216ENST00000472896 HSPA5P11021 654 aaKnown RBP13.32□□□□□ -0.28
APTX-216ENST00000472896 EIF4G2P78344 907 aaKnown RBP eCLIP13.32□□□□□ -0.28
APTX-216ENST00000472896 STRN4Q9NRL3 753 aa13.32□□□□□ -0.28
APTX-216ENST00000472896 MINK1Q8N4C8 1332 aaPredicted RBP13.31□□□□□ -0.28
APTX-216ENST00000472896 FAM9BQ8IZU0 186 aa13.3□□□□□ -0.28
APTX-216ENST00000472896 TRAK1Q9UPV9 953 aa13.3□□□□□ -0.28
APTX-216ENST00000472896 KIAA0232Q92628 1395 aa13.3□□□□□ -0.28
APTX-216ENST00000472896 ZC3H6P61129 1189 aaKnown RBP13.3□□□□□ -0.28
APTX-216ENST00000472896 NGDNQ8NEJ9 315 aaKnown RBP13.3□□□□□ -0.28
APTX-216ENST00000472896 CRYBG1Q9Y4K1 1723 aa13.29□□□□□ -0.28
APTX-216ENST00000472896 CCDC184Q52MB2 194 aa13.29□□□□□ -0.28
APTX-216ENST00000472896 WASLO00401 505 aaPredicted RBP13.28□□□□□ -0.28
APTX-216ENST00000472896 NUTM2GQ5VZR2 741 aa13.28□□□□□ -0.28
APTX-216ENST00000472896 FAM43AQ8N2R8 423 aa13.28□□□□□ -0.28
APTX-216ENST00000472896 PARD3Q8TEW0 1356 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms