RNA–Protein interactions for RNA: ENST00000472888.1

RFXAP-202, Transcript of regulatory factor X associated protein, humanhuman

TSL 3

Gene RFXAP, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAP-202ENST00000472888 CSPP1Q1MSJ5 1256 aa11.48□□□□□ -0.57
RFXAP-202ENST00000472888 TUSC1Q2TAM9 212 aa11.48□□□□□ -0.57
RFXAP-202ENST00000472888 NUTM2DQ5VT03 806 aaPredicted RBP11.48□□□□□ -0.57
RFXAP-202ENST00000472888 NUTM2AQ8IVF1 878 aaPredicted RBP11.48□□□□□ -0.57
RFXAP-202ENST00000472888 POLR3EQ9NVU0 708 aa11.47□□□□□ -0.57
RFXAP-202ENST00000472888 PCDHB15Q9Y5E8 787 aa11.47□□□□□ -0.57
RFXAP-202ENST00000472888 SKIV2LQ15477 1246 aaKnown RBP11.46□□□□□ -0.57
RFXAP-202ENST00000472888 CCDC24Q8N4L8 307 aa11.46□□□□□ -0.57
RFXAP-202ENST00000472888 PRR7Q8TB68 274 aa11.46□□□□□ -0.57
RFXAP-202ENST00000472888 HRCP23327 699 aa11.45□□□□□ -0.58
RFXAP-202ENST00000472888 SH3D19Q5HYK7 790 aa11.45□□□□□ -0.58
RFXAP-202ENST00000472888 DESI1Q6ICB0 168 aa11.45□□□□□ -0.58
RFXAP-202ENST00000472888 SIAH2O43255 324 aa11.44□□□□□ -0.58
RFXAP-202ENST00000472888 BRPF1P55201 1214 aaPredicted RBP11.44□□□□□ -0.58
RFXAP-202ENST00000472888 TRIM46Q7Z4K8 759 aa11.44□□□□□ -0.58
RFXAP-202ENST00000472888 LIMD1Q9UGP4 676 aa11.44□□□□□ -0.58
RFXAP-202ENST00000472888 ALDH1A1P00352 501 aa11.42□□□□□ -0.58
RFXAP-202ENST00000472888 PRKCSHP14314 528 aaPredicted RBP11.42□□□□□ -0.58
RFXAP-202ENST00000472888 GMPRP36959 345 aa11.42□□□□□ -0.58
RFXAP-202ENST00000472888 NUDT12Q9BQG2 462 aa11.42□□□□□ -0.58
RFXAP-202ENST00000472888 NXF1Q9UBU9 619 aaKnown RBP11.42□□□□□ -0.58
RFXAP-202ENST00000472888 BMP1P13497 986 aa11.41□□□□□ -0.58
RFXAP-202ENST00000472888 PTCRAQ6ISU1 281 aaPredicted RBP11.41□□□□□ -0.58
RFXAP-202ENST00000472888 IL27Q8NEV9 243 aa11.41□□□□□ -0.58
RFXAP-202ENST00000472888 PLEKHG3A1L390 1219 aa11.4□□□□□ -0.58
RFXAP-202ENST00000472888 LILRB3O75022 631 aa11.4□□□□□ -0.58
RFXAP-202ENST00000472888 PTPRNQ16849 979 aa11.4□□□□□ -0.58
RFXAP-202ENST00000472888 CABLES1Q8TDN4 633 aa11.4□□□□□ -0.58
RFXAP-202ENST00000472888 CCNYL3P0C7X3 344 aa11.39□□□□□ -0.59
RFXAP-202ENST00000472888 HELBQ8NG08 1087 aaPredicted RBP11.39□□□□□ -0.59
RFXAP-202ENST00000472888 TSC1Q92574 1164 aa11.39□□□□□ -0.59
RFXAP-202ENST00000472888 QPCTQ16769 361 aa11.38□□□□□ -0.59
RFXAP-202ENST00000472888 GOPCQ9HD26 462 aa11.38□□□□□ -0.59
RFXAP-202ENST00000472888 SLC16A10Q8TF71 515 aa11.37□□□□□ -0.59
RFXAP-202ENST00000472888 CFAP99D6REC4 459 aa11.36□□□□□ -0.59
RFXAP-202ENST00000472888 PCMTD1Q96MG8 357 aaPredicted RBP11.36□□□□□ -0.59
RFXAP-202ENST00000472888 ERBB4Q15303 1308 aa11.35□□□□□ -0.59
RFXAP-202ENST00000472888 H3BM21 787 aa11.35□□□□□ -0.59
RFXAP-202ENST00000472888 VEGFBP49765 207 aa11.35□□□□□ -0.59
RFXAP-202ENST00000472888 LYPD8Q6UX82 237 aa11.35□□□□□ -0.59
RFXAP-202ENST00000472888 NPAS3Q8IXF0 933 aa11.35□□□□□ -0.59
RFXAP-202ENST00000472888 EVA1BQ9NVM1 165 aa11.35□□□□□ -0.59
RFXAP-202ENST00000472888 LOC100996750A0A140TA64 210 aa11.34□□□□□ -0.59
RFXAP-202ENST00000472888 ZSCAN1Q8NBB4 408 aa11.34□□□□□ -0.59
RFXAP-202ENST00000472888 KRTAP4-6Q9BYQ5 205 aa11.34□□□□□ -0.59
RFXAP-202ENST00000472888 CAPN5O15484 640 aaPredicted RBP11.33□□□□□ -0.6
RFXAP-202ENST00000472888 CTHP32929 405 aa11.33□□□□□ -0.6
RFXAP-202ENST00000472888 RTL5Q5HYW3 569 aaPredicted RBP11.33□□□□□ -0.6
RFXAP-202ENST00000472888 PROCA1Q8NCQ7 364 aaPredicted RBP11.33□□□□□ -0.6
RFXAP-202ENST00000472888 SH3BP2P78314 561 aa11.32□□□□□ -0.6
RFXAP-202ENST00000472888 KCNH2Q12809 1159 aa11.32□□□□□ -0.6
RFXAP-202ENST00000472888 EHBP1Q8NDI1 1231 aa11.32□□□□□ -0.6
RFXAP-202ENST00000472888 IRF7Q92985 503 aa11.32□□□□□ -0.6
RFXAP-202ENST00000472888 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.32□□□□□ -0.6
RFXAP-202ENST00000472888 FAM181BA6NEQ2 426 aa11.29□□□□□ -0.6
RFXAP-202ENST00000472888 PPP2R2DQ66LE6 453 aa11.29□□□□□ -0.6
RFXAP-202ENST00000472888 UNC93B1Q9H1C4 597 aa11.29□□□□□ -0.6
RFXAP-202ENST00000472888 WASF2Q9Y6W5 498 aa11.28□□□□□ -0.6
RFXAP-202ENST00000472888 ZFP42Q96MM3 310 aa11.27□□□□□ -0.61
RFXAP-202ENST00000472888 TLL2Q9Y6L7 1015 aa11.26□□□□□ -0.61
RFXAP-202ENST00000472888 ARMC2Q8NEN0 867 aa11.25□□□□□ -0.61
RFXAP-202ENST00000472888 PER1O15534 1290 aaPredicted RBP11.24□□□□□ -0.61
RFXAP-202ENST00000472888 AP1G2O75843 785 aa11.24□□□□□ -0.61
RFXAP-202ENST00000472888 F12P00748 615 aaPredicted RBP11.23□□□□□ -0.61
RFXAP-202ENST00000472888 CTDSPL2Q05D32 466 aa11.23□□□□□ -0.61
RFXAP-202ENST00000472888 TMEM259Q4ZIN3 620 aa11.23□□□□□ -0.61
RFXAP-202ENST00000472888 BAP1Q92560 729 aa11.22□□□□□ -0.61
RFXAP-202ENST00000472888 MAP10Q9P2G4 905 aa11.22□□□□□ -0.61
RFXAP-202ENST00000472888 RFC5P40937 340 aa11.21□□□□□ -0.61
RFXAP-202ENST00000472888 VSIG8P0DPA2 414 aa11.2□□□□□ -0.62
RFXAP-202ENST00000472888 LINC01559Q495D7 138 aa11.2□□□□□ -0.62
RFXAP-202ENST00000472888 ZNF511Q8NB15 262 aa11.2□□□□□ -0.62
RFXAP-202ENST00000472888 MPNDQ8N594 471 aa11.19□□□□□ -0.62
RFXAP-202ENST00000472888 PNMA1Q8ND90 353 aa11.19□□□□□ -0.62
RFXAP-202ENST00000472888 KLF16Q9BXK1 252 aaPredicted RBP11.19□□□□□ -0.62
RFXAP-202ENST00000472888 SOBPA7XYQ1 873 aa11.18□□□□□ -0.62
RFXAP-202ENST00000472888 TIMP2P16035 220 aa11.18□□□□□ -0.62
RFXAP-202ENST00000472888 NNTQ13423 1086 aa11.18□□□□□ -0.62
RFXAP-202ENST00000472888 NBPF14Q5TI25 921 aa11.18□□□□□ -0.62
RFXAP-202ENST00000472888 MRPL14Q6P1L8 145 aaKnown RBP11.18□□□□□ -0.62
RFXAP-202ENST00000472888 AGERQ15109 404 aa11.17□□□□□ -0.62
RFXAP-202ENST00000472888 VARSP26640 1264 aaKnown RBP11.16□□□□□ -0.62
RFXAP-202ENST00000472888 LRRN4Q8WUT4 740 aa11.16□□□□□ -0.62
RFXAP-202ENST00000472888 FBXO31Q5XUX0 539 aaPredicted RBP11.15□□□□□ -0.62
RFXAP-202ENST00000472888 BPHLQ86WA6 291 aaPredicted RBP11.15□□□□□ -0.62
RFXAP-202ENST00000472888 GPKOWQ92917 476 aaPredicted RBP eCLIP11.15□□□□□ -0.62
RFXAP-202ENST00000472888 PURBQ96QR8 312 aaKnown RBP11.15□□□□□ -0.62
RFXAP-202ENST00000472888 USP17L8P0C7I0 530 aa11.14□□□□□ -0.63
RFXAP-202ENST00000472888 GSK3AP49840 483 aa11.14□□□□□ -0.63
RFXAP-202ENST00000472888 WDR4P57081 412 aaKnown RBP11.12□□□□□ -0.63
RFXAP-202ENST00000472888 FAM174AQ8TBP5 190 aa11.12□□□□□ -0.63
RFXAP-202ENST00000472888 ADH1CP00326 375 aa11.11□□□□□ -0.63
RFXAP-202ENST00000472888 NR6A1Q15406 480 aa11.11□□□□□ -0.63
RFXAP-202ENST00000472888 BANK1Q8NDB2 785 aa11.11□□□□□ -0.63
RFXAP-202ENST00000472888 FKBPLQ9UIM3 349 aa11.11□□□□□ -0.63
RFXAP-202ENST00000472888 ZC3H4Q9UPT8 1303 aaKnown RBP11.1□□□□□ -0.63
RFXAP-202ENST00000472888 APBB1O00213 710 aa11.1□□□□□ -0.63
RFXAP-202ENST00000472888 SCARF1Q14162 830 aa11.09□□□□□ -0.63
RFXAP-202ENST00000472888 SUZ12Q15022 739 aaKnown RBP11.08□□□□□ -0.64
RFXAP-202ENST00000472888 PDXDC2PQ6P474 469 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms