RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 ALS2Q96Q42 1657 aa27.73■■■□□ 2.03
SF1-213ENST00000472725 ANKRD36BQ8N2N9 1353 aa27.73■■■□□ 2.03
SF1-213ENST00000472725 SSH2Q76I76 1423 aa27.72■■■□□ 2.03
SF1-213ENST00000472725 KTN1Q86UP2 1357 aaKnown RBP27.72■■■□□ 2.03
SF1-213ENST00000472725 C11orf95C9JLR9 678 aaPredicted RBP27.7■■■□□ 2.02
SF1-213ENST00000472725 TTC21AQ8NDW8 1320 aa27.69■■■□□ 2.02
SF1-213ENST00000472725 A0A1W2PP64 1363 aa27.69■■■□□ 2.02
SF1-213ENST00000472725 NRKQ7Z2Y5 1582 aa27.69■■■□□ 2.02
SF1-213ENST00000472725 KIF7Q2M1P5 1343 aa27.68■■■□□ 2.02
SF1-213ENST00000472725 PAK3O75914 559 aaPredicted RBP27.68■■■□□ 2.02
SF1-213ENST00000472725 EDC4Q6P2E9 1401 aaKnown RBP27.67■■■□□ 2.02
SF1-213ENST00000472725 TTC21BQ7Z4L5 1316 aa27.65■■■□□ 2.02
SF1-213ENST00000472725 CCDC7Q96M83 1385 aa27.64■■■□□ 2.02
SF1-213ENST00000472725 POLR3GLQ9BT43 218 aa27.64■■■□□ 2.02
SF1-213ENST00000472725 MED1Q15648 1581 aaPredicted RBP27.64■■■□□ 2.01
SF1-213ENST00000472725 LMOD2Q6P5Q4 547 aa27.62■■■□□ 2.01
SF1-213ENST00000472725 ABTB2Q8N961 1025 aa27.62■■■□□ 2.01
SF1-213ENST00000472725 NLRP13Q86W25 1043 aa27.6■■■□□ 2.01
SF1-213ENST00000472725 WASHC2AQ641Q2 1341 aa27.6■■■□□ 2.01
SF1-213ENST00000472725 PIK3C2AO00443 1686 aa27.58■■■□□ 2.01
SF1-213ENST00000472725 USP54Q70EL1 1684 aa27.56■■■□□ 2
SF1-213ENST00000472725 CRYBG1Q9Y4K1 1723 aa27.56■■■□□ 2
SF1-213ENST00000472725 USP31Q70CQ4 1352 aa27.56■■■□□ 2
SF1-213ENST00000472725 ABCA3Q99758 1704 aa27.55■■■□□ 2
SF1-213ENST00000472725 USP19O94966 1318 aa27.55■■■□□ 2
SF1-213ENST00000472725 NLRP6P59044 892 aa27.54■■■□□ 2
SF1-213ENST00000472725 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.53■■■□□ 2
SF1-213ENST00000472725 PANK3Q9H999 370 aa27.53■■■□□ 2
SF1-213ENST00000472725 LRP6O75581 1613 aa27.52■■■□□ 2
SF1-213ENST00000472725 HAP1P54257 671 aaPredicted RBP27.52■■■□□ 2
SF1-213ENST00000472725 CARD14Q9BXL6 1004 aa27.52■■■□□ 2
SF1-213ENST00000472725 MARF1Q9Y4F3 1742 aaKnown RBP27.52■■■□□ 2
SF1-213ENST00000472725 NSD3Q9BZ95 1437 aa27.51■■□□□ 1.99
SF1-213ENST00000472725 NUTM2BA6NNL0 878 aaPredicted RBP27.51■■□□□ 1.99
SF1-213ENST00000472725 NUTM2EB1AL46 878 aaPredicted RBP27.51■■□□□ 1.99
SF1-213ENST00000472725 NUTM2AQ8IVF1 878 aaPredicted RBP27.51■■□□□ 1.99
SF1-213ENST00000472725 PHRF1Q9P1Y6 1649 aaKnown RBP27.51■■□□□ 1.99
SF1-213ENST00000472725 SLIT3O75094 1523 aa27.5■■□□□ 1.99
SF1-213ENST00000472725 KIF20BQ96Q89 1820 aa27.48■■□□□ 1.99
SF1-213ENST00000472725 CGNL1Q0VF96 1302 aa27.48■■□□□ 1.99
SF1-213ENST00000472725 NUTM2GQ5VZR2 741 aa27.48■■□□□ 1.99
SF1-213ENST00000472725 NME9Q86XW9 330 aa27.48■■□□□ 1.99
SF1-213ENST00000472725 KCNH5Q8NCM2 988 aa27.48■■□□□ 1.99
SF1-213ENST00000472725 CABLES1Q8TDN4 633 aa27.48■■□□□ 1.99
SF1-213ENST00000472725 MEX3CQ5U5Q3 659 aaKnown RBP27.47■■□□□ 1.99
SF1-213ENST00000472725 FYB1O15117 783 aa27.46■■□□□ 1.99
SF1-213ENST00000472725 OVOS2A0A0J9YW53 1432 aa27.46■■□□□ 1.99
SF1-213ENST00000472725 OVOS2Q6IE36 1432 aa27.46■■□□□ 1.99
SF1-213ENST00000472725 GCP02774 474 aa27.45■■□□□ 1.98
SF1-213ENST00000472725 COG3Q96JB2 828 aa27.44■■□□□ 1.98
SF1-213ENST00000472725 KNSTRNQ9Y448 316 aa27.44■■□□□ 1.98
SF1-213ENST00000472725 NSD2O96028 1365 aa27.44■■□□□ 1.98
SF1-213ENST00000472725 ADAMTS2O95450 1211 aa27.43■■□□□ 1.98
SF1-213ENST00000472725 CPDO75976 1380 aa27.43■■□□□ 1.98
SF1-213ENST00000472725 PER1O15534 1290 aaPredicted RBP27.4■■□□□ 1.98
SF1-213ENST00000472725 ANKRD26Q9UPS8 1709 aa27.39■■□□□ 1.98
SF1-213ENST00000472725 ZRANB1Q9UGI0 708 aa27.39■■□□□ 1.98
SF1-213ENST00000472725 COL14A1Q05707 1796 aaKnown RBP27.39■■□□□ 1.98
SF1-213ENST00000472725 PLEKHG5O94827 1062 aa27.38■■□□□ 1.97
SF1-213ENST00000472725 NGLY1Q96IV0 654 aa27.38■■□□□ 1.97
SF1-213ENST00000472725 C8orf37Q96NL8 207 aa27.38■■□□□ 1.97
SF1-213ENST00000472725 NFAT5O94916 1531 aa27.37■■□□□ 1.97
SF1-213ENST00000472725 FNBP4Q8N3X1 1017 aaPredicted RBP27.37■■□□□ 1.97
SF1-213ENST00000472725 GGNBP2Q9H3C7 697 aa27.37■■□□□ 1.97
SF1-213ENST00000472725 NPC1L1Q9UHC9 1359 aa27.36■■□□□ 1.97
SF1-213ENST00000472725 NWD2Q9ULI1 1742 aa27.36■■□□□ 1.97
SF1-213ENST00000472725 ZNF316A6NFI3 1004 aaPredicted RBP27.36■■□□□ 1.97
SF1-213ENST00000472725 PRDM11Q9NQV5 511 aa27.36■■□□□ 1.97
SF1-213ENST00000472725 KIAA0232Q92628 1395 aa27.35■■□□□ 1.97
SF1-213ENST00000472725 FAM83GA6ND36 823 aa27.34■■□□□ 1.97
SF1-213ENST00000472725 ZC3H6P61129 1189 aaKnown RBP27.34■■□□□ 1.97
SF1-213ENST00000472725 PHF23Q9BUL5 403 aaPredicted RBP27.34■■□□□ 1.97
SF1-213ENST00000472725 SLIT2O94813 1529 aa27.34■■□□□ 1.97
SF1-213ENST00000472725 ABCC6O95255 1503 aa27.34■■□□□ 1.97
SF1-213ENST00000472725 AMER1Q5JTC6 1135 aaPredicted RBP27.33■■□□□ 1.97
SF1-213ENST00000472725 ZNF772Q68DY9 489 aaPredicted RBP27.33■■□□□ 1.97
SF1-213ENST00000472725 ARHGEF25Q86VW2 580 aa27.33■■□□□ 1.97
SF1-213ENST00000472725 AATKQ6ZMQ8 1374 aa27.32■■□□□ 1.96
SF1-213ENST00000472725 PLCH1Q4KWH8 1693 aa27.31■■□□□ 1.96
SF1-213ENST00000472725 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.31■■□□□ 1.96
SF1-213ENST00000472725 AFF2P51816 1311 aa27.31■■□□□ 1.96
SF1-213ENST00000472725 LMO7Q8WWI1 1683 aa27.29■■□□□ 1.96
SF1-213ENST00000472725 LTN1O94822 1766 aa27.28■■□□□ 1.96
SF1-213ENST00000472725 USP21Q9UK80 565 aa27.28■■□□□ 1.96
SF1-213ENST00000472725 BCL9LQ86UU0 1499 aa27.27■■□□□ 1.96
SF1-213ENST00000472725 COL18A1P39060 1754 aa27.27■■□□□ 1.96
SF1-213ENST00000472725 KIF24Q5T7B8 1368 aa27.26■■□□□ 1.95
SF1-213ENST00000472725 SOX12O15370 315 aa27.26■■□□□ 1.95
SF1-213ENST00000472725 UNC5CLQ8IV45 518 aa27.26■■□□□ 1.95
SF1-213ENST00000472725 BTG4Q9NY30 223 aa27.25■■□□□ 1.95
SF1-213ENST00000472725 NRAPQ86VF7 1730 aa27.24■■□□□ 1.95
SF1-213ENST00000472725 DDX10Q13206 875 aaKnown RBP27.24■■□□□ 1.95
SF1-213ENST00000472725 CHRNA2Q15822 529 aa27.24■■□□□ 1.95
SF1-213ENST00000472725 MORC1Q86VD1 984 aa27.24■■□□□ 1.95
SF1-213ENST00000472725 RGS17Q9UGC6 210 aaPredicted RBP27.23■■□□□ 1.95
SF1-213ENST00000472725 TRPC5Q9UL62 973 aaPredicted RBP27.23■■□□□ 1.95
SF1-213ENST00000472725 RTL1A6NKG5 1358 aa27.22■■□□□ 1.95
SF1-213ENST00000472725 CAMTA1Q9Y6Y1 1673 aa27.22■■□□□ 1.95
SF1-213ENST00000472725 BLMP54132 1417 aaPredicted RBP27.21■■□□□ 1.95
SF1-213ENST00000472725 MAP2P11137 1827 aaKnown RBP27.2■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms