RNA–Protein interactions for RNA: ENST00000472696.1

EPHA4-212, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 531 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-212ENST00000472696 NPHP3Q7Z494 1330 aa8□□□□□ -1.13
EPHA4-212ENST00000472696 CD163L1Q9NR16 1453 aa8□□□□□ -1.13
EPHA4-212ENST00000472696 A0A1W2PP64 1363 aa7.99□□□□□ -1.13
EPHA4-212ENST00000472696 ANP32CO43423 234 aa7.99□□□□□ -1.13
EPHA4-212ENST00000472696 RALBP1Q15311 655 aa7.99□□□□□ -1.13
EPHA4-212ENST00000472696 MON2Q7Z3U7 1717 aa7.99□□□□□ -1.13
EPHA4-212ENST00000472696 NGDNQ8NEJ9 315 aaKnown RBP7.99□□□□□ -1.13
EPHA4-212ENST00000472696 RGPD8O14715 1765 aaPredicted RBP7.99□□□□□ -1.13
EPHA4-212ENST00000472696 USP6P35125 1406 aa7.98□□□□□ -1.13
EPHA4-212ENST00000472696 SSH2Q76I76 1423 aa7.98□□□□□ -1.13
EPHA4-212ENST00000472696 CERKQ8TCT0 537 aa7.98□□□□□ -1.13
EPHA4-212ENST00000472696 RBM33Q96EV2 1170 aaKnown RBP7.98□□□□□ -1.13
EPHA4-212ENST00000472696 SCAF1Q9H7N4 1312 aaKnown RBP7.98□□□□□ -1.13
EPHA4-212ENST00000472696 SBNO1A3KN83 1393 aa7.97□□□□□ -1.13
EPHA4-212ENST00000472696 USP31Q70CQ4 1352 aa7.97□□□□□ -1.13
EPHA4-212ENST00000472696 NSD3Q9BZ95 1437 aa7.96□□□□□ -1.13
EPHA4-212ENST00000472696 BRINP3Q76B58 766 aa7.96□□□□□ -1.14
EPHA4-212ENST00000472696 PMFBP1Q8TBY8 1022 aa7.96□□□□□ -1.14
EPHA4-212ENST00000472696 CARD14Q9BXL6 1004 aa7.96□□□□□ -1.14
EPHA4-212ENST00000472696 TTC21BQ7Z4L5 1316 aa7.96□□□□□ -1.14
EPHA4-212ENST00000472696 NRKQ7Z2Y5 1582 aa7.96□□□□□ -1.14
EPHA4-212ENST00000472696 USP54Q70EL1 1684 aa7.95□□□□□ -1.14
EPHA4-212ENST00000472696 NUTM2FA1L443 756 aa7.95□□□□□ -1.14
EPHA4-212ENST00000472696 FYB1O15117 783 aa7.95□□□□□ -1.14
EPHA4-212ENST00000472696 NLRP13Q86W25 1043 aa7.95□□□□□ -1.14
EPHA4-212ENST00000472696 ORAI2Q96SN7 254 aa7.95□□□□□ -1.14
EPHA4-212ENST00000472696 PRKRIP1Q9H875 184 aaPredicted RBP7.95□□□□□ -1.14
EPHA4-212ENST00000472696 SOS2Q07890 1332 aaPredicted RBP7.95□□□□□ -1.14
EPHA4-212ENST00000472696 NHSL1Q5SYE7 1610 aa7.95□□□□□ -1.14
EPHA4-212ENST00000472696 ARHGEF10O15013 1369 aa7.95□□□□□ -1.14
EPHA4-212ENST00000472696 ANKRD26Q9UPS8 1709 aa7.95□□□□□ -1.14
EPHA4-212ENST00000472696 KIF20BQ96Q89 1820 aa7.94□□□□□ -1.14
EPHA4-212ENST00000472696 AHDC1Q5TGY3 1603 aaPredicted RBP7.94□□□□□ -1.14
EPHA4-212ENST00000472696 CCER2I3L3R5 266 aa7.94□□□□□ -1.14
EPHA4-212ENST00000472696 FOXO3O43524 673 aa7.94□□□□□ -1.14
EPHA4-212ENST00000472696 KRT28Q7Z3Y7 464 aa7.94□□□□□ -1.14
EPHA4-212ENST00000472696 VSIG10Q8N0Z9 540 aa7.94□□□□□ -1.14
EPHA4-212ENST00000472696 KCNH5Q8NCM2 988 aa7.94□□□□□ -1.14
EPHA4-212ENST00000472696 LRRC59Q96AG4 307 aaKnown RBP7.94□□□□□ -1.14
EPHA4-212ENST00000472696 COG3Q96JB2 828 aa7.94□□□□□ -1.14
EPHA4-212ENST00000472696 KIF24Q5T7B8 1368 aa7.94□□□□□ -1.14
EPHA4-212ENST00000472696 AATKQ6ZMQ8 1374 aa7.94□□□□□ -1.14
EPHA4-212ENST00000472696 PARD3Q8TEW0 1356 aa7.94□□□□□ -1.14
EPHA4-212ENST00000472696 TRPM3Q9HCF6 1732 aaPredicted RBP7.93□□□□□ -1.14
EPHA4-212ENST00000472696 PIAS4Q8N2W9 510 aaPredicted RBP7.93□□□□□ -1.14
EPHA4-212ENST00000472696 ABTB2Q8N961 1025 aa7.93□□□□□ -1.14
EPHA4-212ENST00000472696 PXDNQ92626 1479 aa7.93□□□□□ -1.14
EPHA4-212ENST00000472696 ROBO1Q9Y6N7 1651 aa7.92□□□□□ -1.14
EPHA4-212ENST00000472696 MORC1Q86VD1 984 aa7.92□□□□□ -1.14
EPHA4-212ENST00000472696 SPATA31A3Q5VYP0 1347 aa7.92□□□□□ -1.14
EPHA4-212ENST00000472696 MYBBP1AQ9BQG0 1328 aaKnown RBP7.92□□□□□ -1.14
EPHA4-212ENST00000472696 OVOS2A0A0J9YW53 1432 aa7.92□□□□□ -1.14
EPHA4-212ENST00000472696 TNS3Q68CZ2 1445 aa7.92□□□□□ -1.14
EPHA4-212ENST00000472696 OVOS2Q6IE36 1432 aa7.92□□□□□ -1.14
EPHA4-212ENST00000472696 UBAP1LF5GYI3 381 aa7.91□□□□□ -1.14
EPHA4-212ENST00000472696 NLRP6P59044 892 aa7.91□□□□□ -1.14
EPHA4-212ENST00000472696 PODXL2Q9NZ53 605 aa7.91□□□□□ -1.14
EPHA4-212ENST00000472696 ALS2Q96Q42 1657 aa7.91□□□□□ -1.14
EPHA4-212ENST00000472696 PAK3O75914 559 aaPredicted RBP7.9□□□□□ -1.14
EPHA4-212ENST00000472696 FKBP8Q14318 412 aa7.9□□□□□ -1.14
EPHA4-212ENST00000472696 CC2D1BQ5T0F9 858 aaKnown RBP7.9□□□□□ -1.14
EPHA4-212ENST00000472696 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.9□□□□□ -1.14
EPHA4-212ENST00000472696 PIK3C2AO00443 1686 aa7.89□□□□□ -1.15
EPHA4-212ENST00000472696 MED1Q15648 1581 aaPredicted RBP7.89□□□□□ -1.15
EPHA4-212ENST00000472696 ABCC6O95255 1503 aa7.89□□□□□ -1.15
EPHA4-212ENST00000472696 INSRP06213 1382 aa7.89□□□□□ -1.15
EPHA4-212ENST00000472696 USP19O94966 1318 aa7.89□□□□□ -1.15
EPHA4-212ENST00000472696 GGNBP2Q9H3C7 697 aa7.89□□□□□ -1.15
EPHA4-212ENST00000472696 PHRF1Q9P1Y6 1649 aaKnown RBP7.89□□□□□ -1.15
EPHA4-212ENST00000472696 SLIT3O75094 1523 aa7.88□□□□□ -1.15
EPHA4-212ENST00000472696 SMG6Q86US8 1419 aaKnown RBP7.88□□□□□ -1.15
EPHA4-212ENST00000472696 PPP2R1AP30153 589 aa7.88□□□□□ -1.15
EPHA4-212ENST00000472696 NME9Q86XW9 330 aa7.88□□□□□ -1.15
EPHA4-212ENST00000472696 CFAP53Q96M91 514 aa7.88□□□□□ -1.15
EPHA4-212ENST00000472696 PHLPP1O60346 1717 aa7.88□□□□□ -1.15
EPHA4-212ENST00000472696 COL22A1Q8NFW1 1626 aaPredicted RBP7.88□□□□□ -1.15
EPHA4-212ENST00000472696 RTL1A6NKG5 1358 aa7.87□□□□□ -1.15
EPHA4-212ENST00000472696 PNPLA6Q8IY17 1366 aa7.87□□□□□ -1.15
EPHA4-212ENST00000472696 GCP02774 474 aa7.87□□□□□ -1.15
EPHA4-212ENST00000472696 MAP2P11137 1827 aaKnown RBP7.87□□□□□ -1.15
EPHA4-212ENST00000472696 CPDO75976 1380 aa7.86□□□□□ -1.15
EPHA4-212ENST00000472696 JCADQ9P266 1359 aa7.86□□□□□ -1.15
EPHA4-212ENST00000472696 COL16A1Q07092 1604 aaPredicted RBP7.86□□□□□ -1.15
EPHA4-212ENST00000472696 PIP4K2BP78356 416 aa7.86□□□□□ -1.15
EPHA4-212ENST00000472696 PNNQ9H307 717 aaKnown RBP7.86□□□□□ -1.15
EPHA4-212ENST00000472696 CDK12Q9NYV4 1490 aaPredicted RBP7.86□□□□□ -1.15
EPHA4-212ENST00000472696 MARF1Q9Y4F3 1742 aaKnown RBP7.86□□□□□ -1.15
EPHA4-212ENST00000472696 FLT4P35916 1363 aa7.85□□□□□ -1.15
EPHA4-212ENST00000472696 SPATA31A6Q5VVP1 1343 aa7.85□□□□□ -1.15
EPHA4-212ENST00000472696 MTHFSP49914 203 aa7.85□□□□□ -1.15
EPHA4-212ENST00000472696 LMOD2Q6P5Q4 547 aa7.85□□□□□ -1.15
EPHA4-212ENST00000472696 ARHGEF25Q86VW2 580 aa7.85□□□□□ -1.15
EPHA4-212ENST00000472696 MIER1Q8N108 512 aa7.85□□□□□ -1.15
EPHA4-212ENST00000472696 POLKQ9UBT6 870 aa7.85□□□□□ -1.15
EPHA4-212ENST00000472696 NUDCQ9Y266 331 aa7.85□□□□□ -1.15
EPHA4-212ENST00000472696 SHPRHQ149N8 1683 aa7.85□□□□□ -1.15
EPHA4-212ENST00000472696 BLMP54132 1417 aaPredicted RBP7.85□□□□□ -1.15
EPHA4-212ENST00000472696 NFAT5O94916 1531 aa7.84□□□□□ -1.15
EPHA4-212ENST00000472696 CRYBG1Q9Y4K1 1723 aa7.84□□□□□ -1.15
EPHA4-212ENST00000472696 XPCQ01831 940 aaPredicted RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms