RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 TRPM3Q9HCF6 1732 aaPredicted RBP12.93□□□□□ -0.34
SYN3-211ENST00000472027 TOPAZ1Q8N9V7 1692 aa12.93□□□□□ -0.34
SYN3-211ENST00000472027 NUTM2GQ5VZR2 741 aa12.91□□□□□ -0.34
SYN3-211ENST00000472027 ABTB2Q8N961 1025 aa12.91□□□□□ -0.34
SYN3-211ENST00000472027 TESK2Q96S53 571 aa12.91□□□□□ -0.34
SYN3-211ENST00000472027 TRPC5Q9UL62 973 aaPredicted RBP12.91□□□□□ -0.34
SYN3-211ENST00000472027 ATAD2Q6PL18 1390 aa12.91□□□□□ -0.34
SYN3-211ENST00000472027 FAM83GA6ND36 823 aa12.9□□□□□ -0.34
SYN3-211ENST00000472027 SLC24A1O60721 1099 aa12.9□□□□□ -0.34
SYN3-211ENST00000472027 RBM6P78332 1123 aaKnown RBP12.9□□□□□ -0.34
SYN3-211ENST00000472027 ZNF692Q9BU19 519 aaPredicted RBP12.9□□□□□ -0.34
SYN3-211ENST00000472027 BCL9LQ86UU0 1499 aa12.9□□□□□ -0.34
SYN3-211ENST00000472027 ALS2Q96Q42 1657 aa12.89□□□□□ -0.35
SYN3-211ENST00000472027 UNC5CLQ8IV45 518 aa12.89□□□□□ -0.35
SYN3-211ENST00000472027 PUS7Q96PZ0 661 aaKnown RBP12.89□□□□□ -0.35
SYN3-211ENST00000472027 NLRP13Q86W25 1043 aa12.88□□□□□ -0.35
SYN3-211ENST00000472027 TMC1Q8TDI8 760 aa12.88□□□□□ -0.35
SYN3-211ENST00000472027 BRD4O60885 1362 aaPredicted RBP12.88□□□□□ -0.35
SYN3-211ENST00000472027 SLIT2O94813 1529 aa12.88□□□□□ -0.35
SYN3-211ENST00000472027 USP6P35125 1406 aa12.88□□□□□ -0.35
SYN3-211ENST00000472027 USP47Q96K76 1375 aa12.87□□□□□ -0.35
SYN3-211ENST00000472027 SLC12A5Q9H2X9 1139 aa12.87□□□□□ -0.35
SYN3-211ENST00000472027 MARF1Q9Y4F3 1742 aaKnown RBP12.87□□□□□ -0.35
SYN3-211ENST00000472027 ATRNO75882 1429 aa12.87□□□□□ -0.35
SYN3-211ENST00000472027 NLRP6P59044 892 aa12.86□□□□□ -0.35
SYN3-211ENST00000472027 ZC3H6P61129 1189 aaKnown RBP12.86□□□□□ -0.35
SYN3-211ENST00000472027 GJD4Q96KN9 370 aaPredicted RBP12.86□□□□□ -0.35
SYN3-211ENST00000472027 CPSF1Q10570 1443 aaKnown RBP12.86□□□□□ -0.35
SYN3-211ENST00000472027 SSH2Q76I76 1423 aa12.86□□□□□ -0.35
SYN3-211ENST00000472027 TTC21BQ7Z4L5 1316 aa12.86□□□□□ -0.35
SYN3-211ENST00000472027 TMF1P82094 1093 aa12.85□□□□□ -0.35
SYN3-211ENST00000472027 BTG4Q9NY30 223 aa12.85□□□□□ -0.35
SYN3-211ENST00000472027 KTN1Q86UP2 1357 aaKnown RBP12.84□□□□□ -0.35
SYN3-211ENST00000472027 GCP02774 474 aa12.84□□□□□ -0.35
SYN3-211ENST00000472027 HDGFL2Q7Z4V5 671 aaPredicted RBP12.84□□□□□ -0.35
SYN3-211ENST00000472027 PRDM11Q9NQV5 511 aa12.84□□□□□ -0.35
SYN3-211ENST00000472027 ABCA3Q99758 1704 aa12.84□□□□□ -0.35
SYN3-211ENST00000472027 USP19O94966 1318 aa12.84□□□□□ -0.35
SYN3-211ENST00000472027 CDK12Q9NYV4 1490 aaPredicted RBP12.84□□□□□ -0.35
SYN3-211ENST00000472027 KIAA0232Q92628 1395 aa12.83□□□□□ -0.36
SYN3-211ENST00000472027 CHRNA2Q15822 529 aa12.83□□□□□ -0.36
SYN3-211ENST00000472027 VPS72Q15906 364 aa12.83□□□□□ -0.36
SYN3-211ENST00000472027 TTC21AQ8NDW8 1320 aa12.83□□□□□ -0.36
SYN3-211ENST00000472027 RGS12O14924 1447 aa12.82□□□□□ -0.36
SYN3-211ENST00000472027 TERF2IPQ9NYB0 399 aa12.82□□□□□ -0.36
SYN3-211ENST00000472027 CCDC9Q9Y3X0 531 aaKnown RBP12.82□□□□□ -0.36
SYN3-211ENST00000472027 CD163L1Q9NR16 1453 aa12.82□□□□□ -0.36
SYN3-211ENST00000472027 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.81□□□□□ -0.36
SYN3-211ENST00000472027 CRYBG1Q9Y4K1 1723 aa12.81□□□□□ -0.36
SYN3-211ENST00000472027 CDCA8Q53HL2 280 aa12.8□□□□□ -0.36
SYN3-211ENST00000472027 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.79□□□□□ -0.36
SYN3-211ENST00000472027 COL14A1Q05707 1796 aaKnown RBP12.79□□□□□ -0.36
SYN3-211ENST00000472027 EIF4G2P78344 907 aaKnown RBP eCLIP12.79□□□□□ -0.36
SYN3-211ENST00000472027 ZRANB1Q9UGI0 708 aa12.79□□□□□ -0.36
SYN3-211ENST00000472027 PHRF1Q9P1Y6 1649 aaKnown RBP12.79□□□□□ -0.36
SYN3-211ENST00000472027 PLCH1Q4KWH8 1693 aa12.79□□□□□ -0.36
SYN3-211ENST00000472027 A0A1W2PP64 1363 aa12.79□□□□□ -0.36
SYN3-211ENST00000472027 CPDO75976 1380 aa12.79□□□□□ -0.36
SYN3-211ENST00000472027 NINLQ9Y2I6 1382 aa12.79□□□□□ -0.36
SYN3-211ENST00000472027 AKAP12Q02952 1782 aa12.79□□□□□ -0.36
SYN3-211ENST00000472027 ZBTB7CA1YPR0 619 aa12.78□□□□□ -0.36
SYN3-211ENST00000472027 ONECUT3O60422 494 aaPredicted RBP12.78□□□□□ -0.36
SYN3-211ENST00000472027 HSPA5P11021 654 aaKnown RBP12.78□□□□□ -0.36
SYN3-211ENST00000472027 EVA1CP58658 441 aa12.78□□□□□ -0.36
SYN3-211ENST00000472027 NME9Q86XW9 330 aa12.78□□□□□ -0.36
SYN3-211ENST00000472027 KCNH5Q8NCM2 988 aa12.78□□□□□ -0.36
SYN3-211ENST00000472027 STRN4Q9NRL3 753 aa12.78□□□□□ -0.36
SYN3-211ENST00000472027 NWD2Q9ULI1 1742 aa12.78□□□□□ -0.36
SYN3-211ENST00000472027 NRKQ7Z2Y5 1582 aa12.77□□□□□ -0.36
SYN3-211ENST00000472027 SOX12O15370 315 aa12.77□□□□□ -0.37
SYN3-211ENST00000472027 UPF1Q92900 1129 aaKnown RBP eCLIP12.77□□□□□ -0.37
SYN3-211ENST00000472027 USP31Q70CQ4 1352 aa12.77□□□□□ -0.37
SYN3-211ENST00000472027 EDC4Q6P2E9 1401 aaKnown RBP12.77□□□□□ -0.37
SYN3-211ENST00000472027 SLIT3O75094 1523 aa12.77□□□□□ -0.37
SYN3-211ENST00000472027 GLI3P10071 1580 aa12.77□□□□□ -0.37
SYN3-211ENST00000472027 PIK3C2AO00443 1686 aa12.77□□□□□ -0.37
SYN3-211ENST00000472027 ARHGEF25Q86VW2 580 aa12.76□□□□□ -0.37
SYN3-211ENST00000472027 SEPT12Q8IYM1 358 aa12.76□□□□□ -0.37
SYN3-211ENST00000472027 SPATA31A5Q5VU36 1347 aa12.76□□□□□ -0.37
SYN3-211ENST00000472027 SPATA31A7Q8IWB4 1347 aa12.76□□□□□ -0.37
SYN3-211ENST00000472027 FAM98CQ17RN3 349 aaKnown RBP12.75□□□□□ -0.37
SYN3-211ENST00000472027 MON2Q7Z3U7 1717 aa12.75□□□□□ -0.37
SYN3-211ENST00000472027 ANKRD36BQ8N2N9 1353 aa12.75□□□□□ -0.37
SYN3-211ENST00000472027 NRAPQ86VF7 1730 aa12.74□□□□□ -0.37
SYN3-211ENST00000472027 CAMTA1Q9Y6Y1 1673 aa12.74□□□□□ -0.37
SYN3-211ENST00000472027 AATKQ6ZMQ8 1374 aa12.74□□□□□ -0.37
SYN3-211ENST00000472027 LARP1Q6PKG0 1096 aaKnown RBP12.74□□□□□ -0.37
SYN3-211ENST00000472027 AXIN2Q9Y2T1 843 aa12.74□□□□□ -0.37
SYN3-211ENST00000472027 SPATA31A1Q5TZJ5 1347 aa12.73□□□□□ -0.37
SYN3-211ENST00000472027 A0A0G2JS52 829 aa12.73□□□□□ -0.37
SYN3-211ENST00000472027 MYT1Q01538 1121 aa12.73□□□□□ -0.37
SYN3-211ENST00000472027 POLR3GLQ9BT43 218 aa12.73□□□□□ -0.37
SYN3-211ENST00000472027 USP35Q9P2H5 1018 aa12.73□□□□□ -0.37
SYN3-211ENST00000472027 LMO7Q8WWI1 1683 aa12.71□□□□□ -0.37
SYN3-211ENST00000472027 FYB1O15117 783 aa12.71□□□□□ -0.37
SYN3-211ENST00000472027 KRT27Q7Z3Y8 459 aa12.71□□□□□ -0.37
SYN3-211ENST00000472027 COG3Q96JB2 828 aa12.71□□□□□ -0.37
SYN3-211ENST00000472027 CARD14Q9BXL6 1004 aa12.71□□□□□ -0.37
SYN3-211ENST00000472027 COL5A2P05997 1499 aaPredicted RBP12.71□□□□□ -0.38
SYN3-211ENST00000472027 C11orf95C9JLR9 678 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms