RNA–Protein interactions for RNA: ENST00000471812.5

GGPS1-204, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2

Gene GGPS1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-204ENST00000471812 ANKARQ7Z5J8 1434 aa13.63□□□□□ -0.23
GGPS1-204ENST00000471812 SPATA31A3Q5VYP0 1347 aa13.63□□□□□ -0.23
GGPS1-204ENST00000471812 ALS2Q96Q42 1657 aa13.63□□□□□ -0.23
GGPS1-204ENST00000471812 CHRDL2Q6WN34 429 aa13.62□□□□□ -0.23
GGPS1-204ENST00000471812 CABLES1Q8TDN4 633 aa13.62□□□□□ -0.23
GGPS1-204ENST00000471812 ITSN1Q15811 1721 aa13.61□□□□□ -0.23
GGPS1-204ENST00000471812 CRYBG1Q9Y4K1 1723 aa13.61□□□□□ -0.23
GGPS1-204ENST00000471812 CDK19Q9BWU1 502 aa13.61□□□□□ -0.23
GGPS1-204ENST00000471812 PCGF6Q9BYE7 350 aa13.61□□□□□ -0.23
GGPS1-204ENST00000471812 ZBTB12Q9Y330 459 aaPredicted RBP13.61□□□□□ -0.23
GGPS1-204ENST00000471812 TNS3Q68CZ2 1445 aa13.6□□□□□ -0.23
GGPS1-204ENST00000471812 NUDT16Q96DE0 195 aaKnown RBP13.59□□□□□ -0.23
GGPS1-204ENST00000471812 CABP2Q9NPB3 220 aa13.58□□□□□ -0.24
GGPS1-204ENST00000471812 CENPJQ9HC77 1338 aaPredicted RBP13.58□□□□□ -0.24
GGPS1-204ENST00000471812 ROCK2O75116 1388 aaKnown RBP13.58□□□□□ -0.24
GGPS1-204ENST00000471812 PLCH1Q4KWH8 1693 aa13.56□□□□□ -0.24
GGPS1-204ENST00000471812 RALGAPBQ86X10 1494 aa13.56□□□□□ -0.24
GGPS1-204ENST00000471812 PSME1Q06323 249 aa13.56□□□□□ -0.24
GGPS1-204ENST00000471812 LMOD2Q6P5Q4 547 aa13.56□□□□□ -0.24
GGPS1-204ENST00000471812 NGLY1Q96IV0 654 aa13.56□□□□□ -0.24
GGPS1-204ENST00000471812 SBNO1A3KN83 1393 aa13.56□□□□□ -0.24
GGPS1-204ENST00000471812 GPRASP1Q5JY77 1395 aa13.56□□□□□ -0.24
GGPS1-204ENST00000471812 TONSLQ96HA7 1378 aa13.56□□□□□ -0.24
GGPS1-204ENST00000471812 BCL9LQ86UU0 1499 aa13.55□□□□□ -0.24
GGPS1-204ENST00000471812 RGS12O14924 1447 aa13.54□□□□□ -0.24
GGPS1-204ENST00000471812 PHRF1Q9P1Y6 1649 aaKnown RBP13.53□□□□□ -0.24
GGPS1-204ENST00000471812 NUTM2GQ5VZR2 741 aa13.53□□□□□ -0.24
GGPS1-204ENST00000471812 ZNF772Q68DY9 489 aaPredicted RBP13.53□□□□□ -0.24
GGPS1-204ENST00000471812 NGDNQ8NEJ9 315 aaKnown RBP13.53□□□□□ -0.24
GGPS1-204ENST00000471812 QTRT2Q9H974 415 aaKnown RBP13.53□□□□□ -0.24
GGPS1-204ENST00000471812 ACEP12821 1306 aa13.53□□□□□ -0.24
GGPS1-204ENST00000471812 PPIP5K1Q6PFW1 1433 aa13.53□□□□□ -0.24
GGPS1-204ENST00000471812 NRAPQ86VF7 1730 aa13.53□□□□□ -0.24
GGPS1-204ENST00000471812 SRPK2P78362 688 aaKnown RBP13.52□□□□□ -0.25
GGPS1-204ENST00000471812 FNBP4Q8N3X1 1017 aaPredicted RBP13.52□□□□□ -0.25
GGPS1-204ENST00000471812 AKT1S1Q96B36 256 aa13.52□□□□□ -0.25
GGPS1-204ENST00000471812 USP21Q9UK80 565 aa13.52□□□□□ -0.25
GGPS1-204ENST00000471812 POLR3AO14802 1390 aaPredicted RBP13.52□□□□□ -0.25
GGPS1-204ENST00000471812 ATRNO75882 1429 aa13.52□□□□□ -0.25
GGPS1-204ENST00000471812 SLIT2O94813 1529 aa13.52□□□□□ -0.25
GGPS1-204ENST00000471812 GLI3P10071 1580 aa13.52□□□□□ -0.25
GGPS1-204ENST00000471812 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.52□□□□□ -0.25
GGPS1-204ENST00000471812 EIF3AQ14152 1382 aaKnown RBP13.51□□□□□ -0.25
GGPS1-204ENST00000471812 AKAP12Q02952 1782 aa13.5□□□□□ -0.25
GGPS1-204ENST00000471812 PLEKHG3A1L390 1219 aa13.5□□□□□ -0.25
GGPS1-204ENST00000471812 PAK3O75914 559 aaPredicted RBP13.5□□□□□ -0.25
GGPS1-204ENST00000471812 CCDC61Q9Y6R9 512 aa13.5□□□□□ -0.25
GGPS1-204ENST00000471812 BRWD3Q6RI45 1802 aa13.49□□□□□ -0.25
GGPS1-204ENST00000471812 RXRBP28702 533 aa13.49□□□□□ -0.25
GGPS1-204ENST00000471812 CARD11Q9BXL7 1154 aa13.49□□□□□ -0.25
GGPS1-204ENST00000471812 CABP1Q9NZU7 370 aa13.49□□□□□ -0.25
GGPS1-204ENST00000471812 PIK3C2AO00443 1686 aa13.49□□□□□ -0.25
GGPS1-204ENST00000471812 ARHGEF10O15013 1369 aa13.48□□□□□ -0.25
GGPS1-204ENST00000471812 FAM83GA6ND36 823 aa13.48□□□□□ -0.25
GGPS1-204ENST00000471812 NRKQ7Z2Y5 1582 aa13.48□□□□□ -0.25
GGPS1-204ENST00000471812 NWD2Q9ULI1 1742 aa13.47□□□□□ -0.25
GGPS1-204ENST00000471812 FBXO3Q9UK99 471 aa13.47□□□□□ -0.25
GGPS1-204ENST00000471812 RBM6P78332 1123 aaKnown RBP13.46□□□□□ -0.25
GGPS1-204ENST00000471812 CD163L1Q9NR16 1453 aa13.46□□□□□ -0.25
GGPS1-204ENST00000471812 CDK12Q9NYV4 1490 aaPredicted RBP13.46□□□□□ -0.25
GGPS1-204ENST00000471812 SSH2Q76I76 1423 aa13.46□□□□□ -0.26
GGPS1-204ENST00000471812 COL14A1Q05707 1796 aaKnown RBP13.45□□□□□ -0.26
GGPS1-204ENST00000471812 MON2Q7Z3U7 1717 aa13.45□□□□□ -0.26
GGPS1-204ENST00000471812 CHRNA2Q15822 529 aa13.45□□□□□ -0.26
GGPS1-204ENST00000471812 USP6P35125 1406 aa13.45□□□□□ -0.26
GGPS1-204ENST00000471812 EVC2Q86UK5 1308 aa13.44□□□□□ -0.26
GGPS1-204ENST00000471812 HAP1P54257 671 aaPredicted RBP13.44□□□□□ -0.26
GGPS1-204ENST00000471812 TESK2Q96S53 571 aa13.44□□□□□ -0.26
GGPS1-204ENST00000471812 TRPC5Q9UL62 973 aaPredicted RBP13.44□□□□□ -0.26
GGPS1-204ENST00000471812 KIAA0232Q92628 1395 aa13.44□□□□□ -0.26
GGPS1-204ENST00000471812 ST20-MTHFSA0A0A6YYL1 179 aa13.43□□□□□ -0.26
GGPS1-204ENST00000471812 ZC3H6P61129 1189 aaKnown RBP13.43□□□□□ -0.26
GGPS1-204ENST00000471812 UNC5CLQ8IV45 518 aa13.43□□□□□ -0.26
GGPS1-204ENST00000471812 ZRANB1Q9UGI0 708 aa13.43□□□□□ -0.26
GGPS1-204ENST00000471812 SBNO2Q9Y2G9 1366 aa13.43□□□□□ -0.26
GGPS1-204ENST00000471812 UPF1Q92900 1129 aaKnown RBP eCLIP13.42□□□□□ -0.26
GGPS1-204ENST00000471812 GJD4Q96KN9 370 aaPredicted RBP13.42□□□□□ -0.26
GGPS1-204ENST00000471812 LMO7Q8WWI1 1683 aa13.42□□□□□ -0.26
GGPS1-204ENST00000471812 RGPD5Q99666 1765 aa13.42□□□□□ -0.26
GGPS1-204ENST00000471812 USP19O94966 1318 aa13.41□□□□□ -0.26
GGPS1-204ENST00000471812 EP400Q96L91 3159 aa13.41□□□□□ -0.26
GGPS1-204ENST00000471812 CPSF1Q10570 1443 aaKnown RBP13.41□□□□□ -0.26
GGPS1-204ENST00000471812 ABTB2Q8N961 1025 aa13.41□□□□□ -0.26
GGPS1-204ENST00000471812 BTG4Q9NY30 223 aa13.41□□□□□ -0.26
GGPS1-204ENST00000471812 CAMTA1Q9Y6Y1 1673 aa13.4□□□□□ -0.26
GGPS1-204ENST00000471812 COL18A1P39060 1754 aa13.4□□□□□ -0.26
GGPS1-204ENST00000471812 REM2Q8IYK8 340 aaPredicted RBP13.4□□□□□ -0.26
GGPS1-204ENST00000471812 SLC12A5Q9H2X9 1139 aa13.4□□□□□ -0.26
GGPS1-204ENST00000471812 SLIT3O75094 1523 aa13.39□□□□□ -0.27
GGPS1-204ENST00000471812 PRDM11Q9NQV5 511 aa13.39□□□□□ -0.27
GGPS1-204ENST00000471812 USP47Q96K76 1375 aa13.39□□□□□ -0.27
GGPS1-204ENST00000471812 TTC21BQ7Z4L5 1316 aa13.39□□□□□ -0.27
GGPS1-204ENST00000471812 VPS72Q15906 364 aa13.38□□□□□ -0.27
GGPS1-204ENST00000471812 ATAD2Q6PL18 1390 aa13.37□□□□□ -0.27
GGPS1-204ENST00000471812 VASPP50552 380 aaPredicted RBP13.37□□□□□ -0.27
GGPS1-204ENST00000471812 CCER1Q8TC90 406 aaPredicted RBP13.37□□□□□ -0.27
GGPS1-204ENST00000471812 MYOM1P52179 1685 aa13.37□□□□□ -0.27
GGPS1-204ENST00000471812 A0A1W2PP64 1363 aa13.36□□□□□ -0.27
GGPS1-204ENST00000471812 TMC1Q8TDI8 760 aa13.36□□□□□ -0.27
GGPS1-204ENST00000471812 CCDC9Q9Y3X0 531 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms