RNA–Protein interactions for RNA: ENST00000471751.5

SNX4-203, Transcript of sorting nexin 4, humanhuman

TSL 2

Gene SNX4, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-203ENST00000471751 SSH2Q76I76 1423 aa25.9■■□□□ 1.74
SNX4-203ENST00000471751 RALBP1Q15311 655 aa25.89■■□□□ 1.74
SNX4-203ENST00000471751 NPHP3Q7Z494 1330 aa25.88■■□□□ 1.73
SNX4-203ENST00000471751 PSME1Q06323 249 aa25.88■■□□□ 1.73
SNX4-203ENST00000471751 BRINP3Q76B58 766 aa25.86■■□□□ 1.73
SNX4-203ENST00000471751 PRKRIP1Q9H875 184 aaPredicted RBP25.85■■□□□ 1.73
SNX4-203ENST00000471751 TTC21BQ7Z4L5 1316 aa25.84■■□□□ 1.73
SNX4-203ENST00000471751 NRKQ7Z2Y5 1582 aa25.83■■□□□ 1.73
SNX4-203ENST00000471751 FYB1O15117 783 aa25.83■■□□□ 1.73
SNX4-203ENST00000471751 FOXO3O43524 673 aa25.83■■□□□ 1.73
SNX4-203ENST00000471751 SBNO1A3KN83 1393 aa25.81■■□□□ 1.72
SNX4-203ENST00000471751 PARD3Q8TEW0 1356 aa25.81■■□□□ 1.72
SNX4-203ENST00000471751 USP31Q70CQ4 1352 aa25.8■■□□□ 1.72
SNX4-203ENST00000471751 KRT28Q7Z3Y7 464 aa25.8■■□□□ 1.72
SNX4-203ENST00000471751 KIF20BQ96Q89 1820 aa25.78■■□□□ 1.72
SNX4-203ENST00000471751 PHF23Q9BUL5 403 aaPredicted RBP25.78■■□□□ 1.72
SNX4-203ENST00000471751 SOS2Q07890 1332 aaPredicted RBP25.78■■□□□ 1.72
SNX4-203ENST00000471751 ANKRD26Q9UPS8 1709 aa25.78■■□□□ 1.72
SNX4-203ENST00000471751 CC2D1BQ5T0F9 858 aaKnown RBP25.75■■□□□ 1.71
SNX4-203ENST00000471751 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.75■■□□□ 1.71
SNX4-203ENST00000471751 USP54Q70EL1 1684 aa25.75■■□□□ 1.71
SNX4-203ENST00000471751 NHSL1Q5SYE7 1610 aa25.75■■□□□ 1.71
SNX4-203ENST00000471751 CCER2I3L3R5 266 aa25.74■■□□□ 1.71
SNX4-203ENST00000471751 MORC1Q86VD1 984 aa25.74■■□□□ 1.71
SNX4-203ENST00000471751 COG3Q96JB2 828 aa25.74■■□□□ 1.71
SNX4-203ENST00000471751 PXDNQ92626 1479 aa25.74■■□□□ 1.71
SNX4-203ENST00000471751 TRPM3Q9HCF6 1732 aaPredicted RBP25.73■■□□□ 1.71
SNX4-203ENST00000471751 AHDC1Q5TGY3 1603 aaPredicted RBP25.72■■□□□ 1.71
SNX4-203ENST00000471751 MYBBP1AQ9BQG0 1328 aaKnown RBP25.72■■□□□ 1.71
SNX4-203ENST00000471751 NLRP13Q86W25 1043 aa25.72■■□□□ 1.71
SNX4-203ENST00000471751 ABTB2Q8N961 1025 aa25.72■■□□□ 1.71
SNX4-203ENST00000471751 ROBO1Q9Y6N7 1651 aa25.72■■□□□ 1.71
SNX4-203ENST00000471751 ARHGEF10O15013 1369 aa25.71■■□□□ 1.71
SNX4-203ENST00000471751 MED1Q15648 1581 aaPredicted RBP25.71■■□□□ 1.71
SNX4-203ENST00000471751 NME9Q86XW9 330 aa25.7■■□□□ 1.71
SNX4-203ENST00000471751 GGNBP2Q9H3C7 697 aa25.7■■□□□ 1.71
SNX4-203ENST00000471751 OVOS2A0A0J9YW53 1432 aa25.7■■□□□ 1.7
SNX4-203ENST00000471751 OVOS2Q6IE36 1432 aa25.7■■□□□ 1.7
SNX4-203ENST00000471751 AATKQ6ZMQ8 1374 aa25.7■■□□□ 1.7
SNX4-203ENST00000471751 PAK3O75914 559 aaPredicted RBP25.69■■□□□ 1.7
SNX4-203ENST00000471751 SPATA31A3Q5VYP0 1347 aa25.69■■□□□ 1.7
SNX4-203ENST00000471751 MIER1Q8N108 512 aa25.68■■□□□ 1.7
SNX4-203ENST00000471751 TNS3Q68CZ2 1445 aa25.67■■□□□ 1.7
SNX4-203ENST00000471751 NLRP6P59044 892 aa25.67■■□□□ 1.7
SNX4-203ENST00000471751 LRRC59Q96AG4 307 aaKnown RBP25.67■■□□□ 1.7
SNX4-203ENST00000471751 ALS2Q96Q42 1657 aa25.67■■□□□ 1.7
SNX4-203ENST00000471751 PIK3C2AO00443 1686 aa25.67■■□□□ 1.7
SNX4-203ENST00000471751 KCNH5Q8NCM2 988 aa25.66■■□□□ 1.7
SNX4-203ENST00000471751 PPP2R1AP30153 589 aa25.63■■□□□ 1.69
SNX4-203ENST00000471751 USP19O94966 1318 aa25.61■■□□□ 1.69
SNX4-203ENST00000471751 KIF24Q5T7B8 1368 aa25.61■■□□□ 1.69
SNX4-203ENST00000471751 XPCQ01831 940 aaPredicted RBP25.61■■□□□ 1.69
SNX4-203ENST00000471751 DDX17Q92841 729 aaKnown RBP25.6■■□□□ 1.69
SNX4-203ENST00000471751 SLIT3O75094 1523 aa25.58■■□□□ 1.68
SNX4-203ENST00000471751 INSRP06213 1382 aa25.57■■□□□ 1.68
SNX4-203ENST00000471751 MARF1Q9Y4F3 1742 aaKnown RBP25.57■■□□□ 1.68
SNX4-203ENST00000471751 ZRANB1Q9UGI0 708 aa25.57■■□□□ 1.68
SNX4-203ENST00000471751 MAP2P11137 1827 aaKnown RBP25.57■■□□□ 1.68
SNX4-203ENST00000471751 JCADQ9P266 1359 aa25.55■■□□□ 1.68
SNX4-203ENST00000471751 PHLPP1O60346 1717 aa25.55■■□□□ 1.68
SNX4-203ENST00000471751 SMG6Q86US8 1419 aaKnown RBP25.55■■□□□ 1.68
SNX4-203ENST00000471751 RGS17Q9UGC6 210 aaPredicted RBP25.55■■□□□ 1.68
SNX4-203ENST00000471751 GCP02774 474 aa25.54■■□□□ 1.68
SNX4-203ENST00000471751 CNGB1Q14028 1251 aaPredicted RBP25.54■■□□□ 1.68
SNX4-203ENST00000471751 LMOD2Q6P5Q4 547 aa25.54■■□□□ 1.68
SNX4-203ENST00000471751 CFAP53Q96M91 514 aa25.54■■□□□ 1.68
SNX4-203ENST00000471751 POLKQ9UBT6 870 aa25.54■■□□□ 1.68
SNX4-203ENST00000471751 PNPLA6Q8IY17 1366 aa25.53■■□□□ 1.68
SNX4-203ENST00000471751 MTHFSP49914 203 aa25.52■■□□□ 1.68
SNX4-203ENST00000471751 COL16A1Q07092 1604 aaPredicted RBP25.52■■□□□ 1.68
SNX4-203ENST00000471751 COL22A1Q8NFW1 1626 aaPredicted RBP25.5■■□□□ 1.67
SNX4-203ENST00000471751 NUTM2BA6NNL0 878 aaPredicted RBP25.5■■□□□ 1.67
SNX4-203ENST00000471751 NUTM2EB1AL46 878 aaPredicted RBP25.5■■□□□ 1.67
SNX4-203ENST00000471751 TNNT2P45379 298 aaPredicted RBP25.5■■□□□ 1.67
SNX4-203ENST00000471751 NUTM2AQ8IVF1 878 aaPredicted RBP25.5■■□□□ 1.67
SNX4-203ENST00000471751 NUTM2GQ5VZR2 741 aa25.49■■□□□ 1.67
SNX4-203ENST00000471751 MRS2Q9HD23 443 aa25.49■■□□□ 1.67
SNX4-203ENST00000471751 PHRF1Q9P1Y6 1649 aaKnown RBP25.49■■□□□ 1.67
SNX4-203ENST00000471751 NFAT5O94916 1531 aa25.49■■□□□ 1.67
SNX4-203ENST00000471751 RTL1A6NKG5 1358 aa25.48■■□□□ 1.67
SNX4-203ENST00000471751 MEX3CQ5U5Q3 659 aaKnown RBP25.48■■□□□ 1.67
SNX4-203ENST00000471751 CDK12Q9NYV4 1490 aaPredicted RBP25.48■■□□□ 1.67
SNX4-203ENST00000471751 CRYBG1Q9Y4K1 1723 aa25.48■■□□□ 1.67
SNX4-203ENST00000471751 CPDO75976 1380 aa25.47■■□□□ 1.67
SNX4-203ENST00000471751 ABCC6O95255 1503 aa25.47■■□□□ 1.67
SNX4-203ENST00000471751 ARHGEF25Q86VW2 580 aa25.46■■□□□ 1.67
SNX4-203ENST00000471751 POTEAQ6S8J7 498 aa25.45■■□□□ 1.66
SNX4-203ENST00000471751 FLT4P35916 1363 aa25.45■■□□□ 1.66
SNX4-203ENST00000471751 MAP3K19Q56UN5 1328 aa25.45■■□□□ 1.66
SNX4-203ENST00000471751 PNISRQ8TF01 805 aaKnown RBP25.43■■□□□ 1.66
SNX4-203ENST00000471751 IP6K1Q92551 441 aa25.42■■□□□ 1.66
SNX4-203ENST00000471751 NUDCQ9Y266 331 aa25.42■■□□□ 1.66
SNX4-203ENST00000471751 SPATA31A6Q5VVP1 1343 aa25.42■■□□□ 1.66
SNX4-203ENST00000471751 SHPRHQ149N8 1683 aa25.42■■□□□ 1.66
SNX4-203ENST00000471751 AMPHP49418 695 aa25.41■■□□□ 1.66
SNX4-203ENST00000471751 RRS1Q15050 365 aaKnown RBP25.41■■□□□ 1.66
SNX4-203ENST00000471751 EMILIN1Q9Y6C2 1016 aa25.41■■□□□ 1.66
SNX4-203ENST00000471751 BLMP54132 1417 aaPredicted RBP25.4■■□□□ 1.66
SNX4-203ENST00000471751 LTN1O94822 1766 aa25.39■■□□□ 1.66
SNX4-203ENST00000471751 DIAPH1O60610 1272 aaKnown RBP25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 1227.6 ms