RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 GGNBP2Q9H3C7 697 aa24.26■■□□□ 1.47
COL20A1-205ENST00000471582 ANP32EQ9BTT0 268 aa24.25■■□□□ 1.47
COL20A1-205ENST00000471582 CABP1Q9NZU7 370 aa24.25■■□□□ 1.47
COL20A1-205ENST00000471582 KDM4FA0A1W2PPD8 638 aa24.23■■□□□ 1.47
COL20A1-205ENST00000471582 U2AF1L5P0DN76 240 aaPredicted RBP24.22■■□□□ 1.47
COL20A1-205ENST00000471582 MS4A1P11836 297 aa24.22■■□□□ 1.47
COL20A1-205ENST00000471582 U2AF1Q01081 240 aaKnown RBP eCLIP24.22■■□□□ 1.47
COL20A1-205ENST00000471582 TBX22Q9Y458 520 aa24.22■■□□□ 1.47
COL20A1-205ENST00000471582 PNPLA6Q8IY17 1366 aa24.22■■□□□ 1.47
COL20A1-205ENST00000471582 MSH5O43196 834 aa24.2■■□□□ 1.46
COL20A1-205ENST00000471582 CPSF1Q10570 1443 aaKnown RBP24.2■■□□□ 1.46
COL20A1-205ENST00000471582 WASLO00401 505 aaPredicted RBP24.2■■□□□ 1.46
COL20A1-205ENST00000471582 SLC26A8Q96RN1 970 aa24.2■■□□□ 1.46
COL20A1-205ENST00000471582 KDM2BQ8NHM5 1336 aa24.19■■□□□ 1.46
COL20A1-205ENST00000471582 CDC42BPGQ6DT37 1551 aa24.19■■□□□ 1.46
COL20A1-205ENST00000471582 ANKLE2Q86XL3 938 aa24.18■■□□□ 1.46
COL20A1-205ENST00000471582 RRP7AQ9Y3A4 280 aaKnown RBP24.18■■□□□ 1.46
COL20A1-205ENST00000471582 EDC4Q6P2E9 1401 aaKnown RBP24.18■■□□□ 1.46
COL20A1-205ENST00000471582 PDE3AQ14432 1141 aa24.17■■□□□ 1.46
COL20A1-205ENST00000471582 NEUROD2Q15784 382 aa24.17■■□□□ 1.46
COL20A1-205ENST00000471582 CENPQQ7L2Z9 268 aaPredicted RBP24.17■■□□□ 1.46
COL20A1-205ENST00000471582 BCAR3O75815 825 aa24.16■■□□□ 1.46
COL20A1-205ENST00000471582 PLEKHF1Q96S99 279 aa24.16■■□□□ 1.46
COL20A1-205ENST00000471582 PPIP5K1Q6PFW1 1433 aa24.16■■□□□ 1.46
COL20A1-205ENST00000471582 PTPRUQ92729 1446 aa24.15■■□□□ 1.46
COL20A1-205ENST00000471582 ROBO2Q9HCK4 1378 aa24.14■■□□□ 1.46
COL20A1-205ENST00000471582 MYH16Q9H6N6 1097 aa24.14■■□□□ 1.46
COL20A1-205ENST00000471582 PIK3R4Q99570 1358 aa24.14■■□□□ 1.45
COL20A1-205ENST00000471582 MON2Q7Z3U7 1717 aa24.13■■□□□ 1.45
COL20A1-205ENST00000471582 PNNQ9H307 717 aaKnown RBP24.13■■□□□ 1.45
COL20A1-205ENST00000471582 PTCH1Q13635 1447 aa24.13■■□□□ 1.45
COL20A1-205ENST00000471582 DIAPH1O60610 1272 aaKnown RBP24.12■■□□□ 1.45
COL20A1-205ENST00000471582 U2SURPO15042 1029 aaKnown RBP24.11■■□□□ 1.45
COL20A1-205ENST00000471582 XRN1Q8IZH2 1706 aaKnown RBP24.11■■□□□ 1.45
COL20A1-205ENST00000471582 MAPK8IP3Q9UPT6 1336 aa24.1■■□□□ 1.45
COL20A1-205ENST00000471582 AKAP12Q02952 1782 aa24.1■■□□□ 1.45
COL20A1-205ENST00000471582 RARSP54136 660 aaKnown RBP24.1■■□□□ 1.45
COL20A1-205ENST00000471582 AMOTL2Q9Y2J4 779 aa24.1■■□□□ 1.45
COL20A1-205ENST00000471582 CT47B1P0C2W7 299 aaPredicted RBP24.09■■□□□ 1.45
COL20A1-205ENST00000471582 TMPOP42166 694 aaKnown RBP24.08■■□□□ 1.45
COL20A1-205ENST00000471582 NUDT16Q96DE0 195 aaKnown RBP24.08■■□□□ 1.45
COL20A1-205ENST00000471582 CCDC61Q9Y6R9 512 aa24.08■■□□□ 1.45
COL20A1-205ENST00000471582 ITSN1Q15811 1721 aa24.08■■□□□ 1.45
COL20A1-205ENST00000471582 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.08■■□□□ 1.45
COL20A1-205ENST00000471582 IL16Q14005 1332 aa24.08■■□□□ 1.45
COL20A1-205ENST00000471582 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.08■■□□□ 1.44
COL20A1-205ENST00000471582 AATKQ6ZMQ8 1374 aa24.07■■□□□ 1.44
COL20A1-205ENST00000471582 ANP32AP39687 249 aaKnown RBP24.06■■□□□ 1.44
COL20A1-205ENST00000471582 AAMPQ13685 434 aa24.06■■□□□ 1.44
COL20A1-205ENST00000471582 PDE4AP27815 886 aa24.06■■□□□ 1.44
COL20A1-205ENST00000471582 BACH2Q9BYV9 841 aa24.06■■□□□ 1.44
COL20A1-205ENST00000471582 POLKQ9UBT6 870 aa24.06■■□□□ 1.44
COL20A1-205ENST00000471582 CDK12Q9NYV4 1490 aaPredicted RBP24.05■■□□□ 1.44
COL20A1-205ENST00000471582 FCHSD2O94868 740 aa24.05■■□□□ 1.44
COL20A1-205ENST00000471582 CANXP27824 592 aaKnown RBP24.05■■□□□ 1.44
COL20A1-205ENST00000471582 NPHP4O75161 1426 aaPredicted RBP24.05■■□□□ 1.44
COL20A1-205ENST00000471582 LRRC7Q96NW7 1537 aa24.04■■□□□ 1.44
COL20A1-205ENST00000471582 MAP2P11137 1827 aaKnown RBP24.04■■□□□ 1.44
COL20A1-205ENST00000471582 TOPAZ1Q8N9V7 1692 aa24.03■■□□□ 1.44
COL20A1-205ENST00000471582 TRIM35Q9UPQ4 493 aa24.03■■□□□ 1.44
COL20A1-205ENST00000471582 ZNF692Q9BU19 519 aaPredicted RBP24.02■■□□□ 1.44
COL20A1-205ENST00000471582 CHD2O14647 1828 aaKnown RBP24.02■■□□□ 1.44
COL20A1-205ENST00000471582 ERICH6Q7L0X2 663 aa24.01■■□□□ 1.43
COL20A1-205ENST00000471582 NRKQ7Z2Y5 1582 aa23.99■■□□□ 1.43
COL20A1-205ENST00000471582 CLUAP1Q96AJ1 413 aa23.99■■□□□ 1.43
COL20A1-205ENST00000471582 PRR36Q9H6K5 1346 aa23.99■■□□□ 1.43
COL20A1-205ENST00000471582 NME9Q86XW9 330 aa23.98■■□□□ 1.43
COL20A1-205ENST00000471582 RSPH6AQ9H0K4 717 aa23.98■■□□□ 1.43
COL20A1-205ENST00000471582 KCNA6P17658 529 aa23.98■■□□□ 1.43
COL20A1-205ENST00000471582 COG3Q96JB2 828 aa23.98■■□□□ 1.43
COL20A1-205ENST00000471582 IPO9Q96P70 1041 aaKnown RBP23.98■■□□□ 1.43
COL20A1-205ENST00000471582 RIPK4P57078 832 aa23.97■■□□□ 1.43
COL20A1-205ENST00000471582 PANK1Q8TE04 598 aa23.97■■□□□ 1.43
COL20A1-205ENST00000471582 FRAT1Q92837 279 aaPredicted RBP23.97■■□□□ 1.43
COL20A1-205ENST00000471582 COG6Q9Y2V7 657 aa23.96■■□□□ 1.43
COL20A1-205ENST00000471582 NCKAP5LQ9HCH0 1330 aa23.95■■□□□ 1.42
COL20A1-205ENST00000471582 NEFMP07197 916 aa23.95■■□□□ 1.42
COL20A1-205ENST00000471582 NOP58Q9Y2X3 529 aaKnown RBP23.95■■□□□ 1.42
COL20A1-205ENST00000471582 PPM1GO15355 546 aaPredicted RBP23.94■■□□□ 1.42
COL20A1-205ENST00000471582 PLEKHG3A1L390 1219 aa23.93■■□□□ 1.42
COL20A1-205ENST00000471582 IL13P35225 146 aa23.93■■□□□ 1.42
COL20A1-205ENST00000471582 TSR2Q969E8 191 aaKnown RBP23.93■■□□□ 1.42
COL20A1-205ENST00000471582 EMILIN1Q9Y6C2 1016 aa23.93■■□□□ 1.42
COL20A1-205ENST00000471582 LMTK3Q96Q04 1460 aa23.93■■□□□ 1.42
COL20A1-205ENST00000471582 PRKAR2BP31323 418 aa23.92■■□□□ 1.42
COL20A1-205ENST00000471582 SKAP1Q86WV1 359 aa23.91■■□□□ 1.42
COL20A1-205ENST00000471582 FBLN1P23142 703 aa23.9■■□□□ 1.42
COL20A1-205ENST00000471582 EXOSC9Q06265 439 aaKnown RBP23.9■■□□□ 1.42
COL20A1-205ENST00000471582 ZKSCAN2Q63HK3 967 aa23.9■■□□□ 1.42
COL20A1-205ENST00000471582 NWD1Q149M9 1564 aa23.9■■□□□ 1.42
COL20A1-205ENST00000471582 RLBP1P12271 317 aa23.89■■□□□ 1.42
COL20A1-205ENST00000471582 NFE2L2Q16236 605 aa23.89■■□□□ 1.42
COL20A1-205ENST00000471582 BCL2L13Q9BXK5 485 aa23.89■■□□□ 1.42
COL20A1-205ENST00000471582 ZRANB1Q9UGI0 708 aa23.89■■□□□ 1.42
COL20A1-205ENST00000471582 OVOS2A0A0J9YW53 1432 aa23.89■■□□□ 1.41
COL20A1-205ENST00000471582 USP6P35125 1406 aa23.89■■□□□ 1.41
COL20A1-205ENST00000471582 OVOS2Q6IE36 1432 aa23.89■■□□□ 1.41
COL20A1-205ENST00000471582 NALCNQ8IZF0 1738 aa23.89■■□□□ 1.41
COL20A1-205ENST00000471582 ACEP12821 1306 aa23.88■■□□□ 1.41
COL20A1-205ENST00000471582 NUTM2FA1L443 756 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms