RNA–Protein interactions for RNA: ENST00000471572.6

NF1-208, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 2,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-208ENST00000471572 NR1H3Q13133 447 aa9.1□□□□□ -0.95
NF1-208ENST00000471572 TSNAXIP1Q2TAA8 658 aa9.1□□□□□ -0.95
NF1-208ENST00000471572 FAM200AQ8TCP9 573 aa9.1□□□□□ -0.95
NF1-208ENST00000471572 PPP1R3GB7ZBB8 358 aa9.09□□□□□ -0.95
NF1-208ENST00000471572 SYMPKQ92797 1274 aaKnown RBP9.09□□□□□ -0.95
NF1-208ENST00000471572 SLC10A3P09131 477 aa9.09□□□□□ -0.95
NF1-208ENST00000471572 RASA1P20936 1047 aa9.09□□□□□ -0.95
NF1-208ENST00000471572 SF3A1Q15459 793 aaKnown RBP9.09□□□□□ -0.95
NF1-208ENST00000471572 C6orf229H3BNL8 230 aa9.08□□□□□ -0.96
NF1-208ENST00000471572 ZNF211Q13398 564 aaPredicted RBP9.08□□□□□ -0.96
NF1-208ENST00000471572 NCOA4Q13772 614 aa9.08□□□□□ -0.96
NF1-208ENST00000471572 PNMA1Q8ND90 353 aa9.08□□□□□ -0.96
NF1-208ENST00000471572 TATDN2Q93075 761 aa9.08□□□□□ -0.96
NF1-208ENST00000471572 PNMA3Q9UL41 463 aa9.08□□□□□ -0.96
NF1-208ENST00000471572 SMAPO00193 183 aa9.07□□□□□ -0.96
NF1-208ENST00000471572 ANKMY2Q8IV38 441 aa9.07□□□□□ -0.96
NF1-208ENST00000471572 DHX37Q8IY37 1157 aaKnown RBP9.07□□□□□ -0.96
NF1-208ENST00000471572 CDCA7Q9BWT1 371 aaPredicted RBP9.07□□□□□ -0.96
NF1-208ENST00000471572 ANO2Q9NQ90 1003 aa9.07□□□□□ -0.96
NF1-208ENST00000471572 H3BRB1 525 aa9.06□□□□□ -0.96
NF1-208ENST00000471572 BACH2Q9BYV9 841 aa9.06□□□□□ -0.96
NF1-208ENST00000471572 TUT1Q9H6E5 874 aaKnown RBP9.06□□□□□ -0.96
NF1-208ENST00000471572 ERCC5P28715 1186 aaPredicted RBP9.05□□□□□ -0.96
NF1-208ENST00000471572 ECM1Q16610 540 aa9.05□□□□□ -0.96
NF1-208ENST00000471572 C1orf216Q8TAB5 229 aa9.05□□□□□ -0.96
NF1-208ENST00000471572 POLR3GLQ9BT43 218 aa9.05□□□□□ -0.96
NF1-208ENST00000471572 NBPF26B4DH59 902 aa9.05□□□□□ -0.96
NF1-208ENST00000471572 ABL1P00519 1130 aa9.05□□□□□ -0.96
NF1-208ENST00000471572 DPYDQ12882 1025 aa9.05□□□□□ -0.96
NF1-208ENST00000471572 C9orf131Q5VYM1 1079 aa9.05□□□□□ -0.96
NF1-208ENST00000471572 LARP1Q6PKG0 1096 aaKnown RBP9.05□□□□□ -0.96
NF1-208ENST00000471572 ZNF662Q6ZS27 426 aa9.05□□□□□ -0.96
NF1-208ENST00000471572 DPH6Q7L8W6 267 aa9.05□□□□□ -0.96
NF1-208ENST00000471572 ANKRD62A6NC57 917 aa9.04□□□□□ -0.96
NF1-208ENST00000471572 HDLBPQ00341 1268 aaKnown RBP9.04□□□□□ -0.96
NF1-208ENST00000471572 KCNH2Q12809 1159 aa9.04□□□□□ -0.96
NF1-208ENST00000471572 SWI5Q1ZZU3 235 aa9.04□□□□□ -0.96
NF1-208ENST00000471572 LDLRAD1Q5T700 205 aa9.04□□□□□ -0.96
NF1-208ENST00000471572 ASB16Q96NS5 453 aa9.04□□□□□ -0.96
NF1-208ENST00000471572 ZBBXA8MT70 800 aa9.04□□□□□ -0.96
NF1-208ENST00000471572 ANKRD13AQ8IZ07 590 aa9.04□□□□□ -0.96
NF1-208ENST00000471572 MAPK1P28482 360 aa9.03□□□□□ -0.96
NF1-208ENST00000471572 CLDN10P78369 228 aa9.03□□□□□ -0.96
NF1-208ENST00000471572 EGFL7Q9UHF1 273 aa9.03□□□□□ -0.96
NF1-208ENST00000471572 ICMTO60725 284 aa9.02□□□□□ -0.97
NF1-208ENST00000471572 MRPL58Q14197 206 aaKnown RBP9.02□□□□□ -0.97
NF1-208ENST00000471572 OCLNQ16625 522 aa9.02□□□□□ -0.97
NF1-208ENST00000471572 ZNF594Q96JF6 807 aaPredicted RBP9.02□□□□□ -0.97
NF1-208ENST00000471572 HIRIP3Q9BW71 556 aaPredicted RBP9.02□□□□□ -0.97
NF1-208ENST00000471572 ATP5J2-PTCD1G3V325 749 aa9.02□□□□□ -0.97
NF1-208ENST00000471572 PRMT3O60678 531 aa9.02□□□□□ -0.97
NF1-208ENST00000471572 RAD51AP2Q09MP3 1159 aa9.02□□□□□ -0.97
NF1-208ENST00000471572 ZC3H4Q9UPT8 1303 aaKnown RBP9.02□□□□□ -0.97
NF1-208ENST00000471572 NUDT7P0C024 238 aa9.01□□□□□ -0.97
NF1-208ENST00000471572 NCLP19338 710 aaKnown RBP9.01□□□□□ -0.97
NF1-208ENST00000471572 FUT2Q10981 343 aa9.01□□□□□ -0.97
NF1-208ENST00000471572 C3orf67Q6ZVT6 689 aa9.01□□□□□ -0.97
NF1-208ENST00000471572 TAS1R3Q7RTX0 852 aa9.01□□□□□ -0.97
NF1-208ENST00000471572 KHSRPQ92945 711 aaKnown RBP eCLIP9.01□□□□□ -0.97
NF1-208ENST00000471572 POTEFA5A3E0 1075 aa9□□□□□ -0.97
NF1-208ENST00000471572 OGFOD1Q8N543 542 aa9□□□□□ -0.97
NF1-208ENST00000471572 PIK3R5Q8WYR1 880 aa9□□□□□ -0.97
NF1-208ENST00000471572 TRIM6-TRIM34B2RNG4 842 aa9□□□□□ -0.97
NF1-208ENST00000471572 DKK1O94907 266 aa9□□□□□ -0.97
NF1-208ENST00000471572 ARHGAP4P98171 946 aa9□□□□□ -0.97
NF1-208ENST00000471572 GLYCTKQ8IVS8 523 aa9□□□□□ -0.97
NF1-208ENST00000471572 DNAJC2Q99543 621 aaKnown RBP8.99□□□□□ -0.97
NF1-208ENST00000471572 DCTN4Q9UJW0 460 aa8.99□□□□□ -0.97
NF1-208ENST00000471572 PHTF2Q8N3S3 785 aa8.98□□□□□ -0.97
NF1-208ENST00000471572 CXXC1Q9P0U4 656 aaPredicted RBP8.98□□□□□ -0.97
NF1-208ENST00000471572 SEC24BO95487 1268 aa8.98□□□□□ -0.97
NF1-208ENST00000471572 MTMR3Q13615 1198 aa8.98□□□□□ -0.97
NF1-208ENST00000471572 PLPP7Q8NBV4 271 aa8.98□□□□□ -0.97
NF1-208ENST00000471572 PRIMPOLQ96LW4 560 aa8.98□□□□□ -0.97
NF1-208ENST00000471572 KIAA1024Q9UPX6 916 aa8.98□□□□□ -0.97
NF1-208ENST00000471572 SCAMP3O14828 347 aaKnown RBP8.97□□□□□ -0.97
NF1-208ENST00000471572 C21orf2O43822 256 aa8.97□□□□□ -0.97
NF1-208ENST00000471572 CEP126Q9P2H0 1117 aa8.97□□□□□ -0.97
NF1-208ENST00000471572 LZTS3O60299 673 aaPredicted RBP8.96□□□□□ -0.98
NF1-208ENST00000471572 LNPKQ9C0E8 428 aa8.96□□□□□ -0.98
NF1-208ENST00000471572 SEPT3Q9UH03 358 aa8.96□□□□□ -0.98
NF1-208ENST00000471572 FKBPLQ9UIM3 349 aa8.96□□□□□ -0.98
NF1-208ENST00000471572 BRPF3Q9ULD4 1205 aa8.96□□□□□ -0.98
NF1-208ENST00000471572 DNMT3AQ9Y6K1 912 aaPredicted RBP8.96□□□□□ -0.98
NF1-208ENST00000471572 PROX2Q3B8N5 592 aa8.95□□□□□ -0.98
NF1-208ENST00000471572 EAPPQ56P03 285 aaPredicted RBP8.95□□□□□ -0.98
NF1-208ENST00000471572 PACS2Q86VP3 889 aa8.95□□□□□ -0.98
NF1-208ENST00000471572 METTL16Q86W50 562 aaKnown RBP8.95□□□□□ -0.98
NF1-208ENST00000471572 TINF2Q9BSI4 451 aa8.95□□□□□ -0.98
NF1-208ENST00000471572 BCL2L12Q9HB09 334 aa8.95□□□□□ -0.98
NF1-208ENST00000471572 P4HBP07237 508 aaKnown RBP8.95□□□□□ -0.98
NF1-208ENST00000471572 COL19A1Q14993 1142 aa8.95□□□□□ -0.98
NF1-208ENST00000471572 TSGA10IPQ3SY00 556 aa8.95□□□□□ -0.98
NF1-208ENST00000471572 SWT1Q5T5J6 900 aaKnown RBP8.95□□□□□ -0.98
NF1-208ENST00000471572 CAPN12Q6ZSI9 719 aa8.95□□□□□ -0.98
NF1-208ENST00000471572 RNF135Q8IUD6 432 aa8.95□□□□□ -0.98
NF1-208ENST00000471572 GTF3C2Q8WUA4 911 aaPredicted RBP8.95□□□□□ -0.98
NF1-208ENST00000471572 TANGO6Q9C0B7 1094 aa8.95□□□□□ -0.98
NF1-208ENST00000471572 SLFNL1Q499Z3 407 aa8.94□□□□□ -0.98
NF1-208ENST00000471572 TRAF7Q6Q0C0 670 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms