RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 TTLL12Q14166 644 aaPredicted RBP5.36□□□□□ -1.55
COMMD3-209ENST00000471350 C4orf48Q5BLP8 95 aa5.36□□□□□ -1.55
COMMD3-209ENST00000471350 KRI1Q8N9T8 703 aaKnown RBP5.36□□□□□ -1.55
COMMD3-209ENST00000471350 KIFC2Q96AC6 838 aa5.36□□□□□ -1.55
COMMD3-209ENST00000471350 SPDYE5A6NIY4 337 aa5.35□□□□□ -1.55
COMMD3-209ENST00000471350 CAPN5O15484 640 aaPredicted RBP5.35□□□□□ -1.55
COMMD3-209ENST00000471350 MAP10Q9P2G4 905 aa5.35□□□□□ -1.55
COMMD3-209ENST00000471350 PER1O15534 1290 aaPredicted RBP5.34□□□□□ -1.55
COMMD3-209ENST00000471350 TIMP2P16035 220 aa5.34□□□□□ -1.55
COMMD3-209ENST00000471350 VARSP26640 1264 aaKnown RBP5.34□□□□□ -1.55
COMMD3-209ENST00000471350 CABLES1Q8TDN4 633 aa5.34□□□□□ -1.55
COMMD3-209ENST00000471350 FOXJ1Q92949 421 aa5.34□□□□□ -1.55
COMMD3-209ENST00000471350 CDK15Q96Q40 435 aa5.34□□□□□ -1.55
COMMD3-209ENST00000471350 LIMD1Q9UGP4 676 aa5.34□□□□□ -1.55
COMMD3-209ENST00000471350 ERBB4Q15303 1308 aa5.33□□□□□ -1.56
COMMD3-209ENST00000471350 NR3C2P08235 984 aa5.33□□□□□ -1.56
COMMD3-209ENST00000471350 NNTQ13423 1086 aa5.33□□□□□ -1.56
COMMD3-209ENST00000471350 PRPF38BQ5VTL8 546 aaKnown RBP5.33□□□□□ -1.56
COMMD3-209ENST00000471350 ZFP42Q96MM3 310 aa5.33□□□□□ -1.56
COMMD3-209ENST00000471350 NXF1Q9UBU9 619 aaKnown RBP5.33□□□□□ -1.56
COMMD3-209ENST00000471350 H3BM21 787 aa5.32□□□□□ -1.56
COMMD3-209ENST00000471350 GRM5P41594 1212 aa5.32□□□□□ -1.56
COMMD3-209ENST00000471350 QPCTQ16769 361 aa5.32□□□□□ -1.56
COMMD3-209ENST00000471350 TUSC1Q2TAM9 212 aa5.32□□□□□ -1.56
COMMD3-209ENST00000471350 MYSM1Q5VVJ2 828 aa5.32□□□□□ -1.56
COMMD3-209ENST00000471350 RIC3Q7Z5B4 369 aa5.32□□□□□ -1.56
COMMD3-209ENST00000471350 STK17AQ9UEE5 414 aa5.32□□□□□ -1.56
COMMD3-209ENST00000471350 WASF2Q9Y6W5 498 aa5.32□□□□□ -1.56
COMMD3-209ENST00000471350 LILRB3O75022 631 aa5.31□□□□□ -1.56
COMMD3-209ENST00000471350 ADH1CP00326 375 aa5.31□□□□□ -1.56
COMMD3-209ENST00000471350 GMPRP36959 345 aa5.31□□□□□ -1.56
COMMD3-209ENST00000471350 FBXO31Q5XUX0 539 aaPredicted RBP5.31□□□□□ -1.56
COMMD3-209ENST00000471350 MRPL14Q6P1L8 145 aaKnown RBP5.31□□□□□ -1.56
COMMD3-209ENST00000471350 SH3RF1Q7Z6J0 888 aa5.31□□□□□ -1.56
COMMD3-209ENST00000471350 NPAS3Q8IXF0 933 aa5.31□□□□□ -1.56
COMMD3-209ENST00000471350 AK7Q96M32 723 aa5.31□□□□□ -1.56
COMMD3-209ENST00000471350 ZBTB3Q9H5J0 574 aa5.31□□□□□ -1.56
COMMD3-209ENST00000471350 VEGFBP49765 207 aa5.3□□□□□ -1.56
COMMD3-209ENST00000471350 INSM1Q01101 510 aaPredicted RBP5.3□□□□□ -1.56
COMMD3-209ENST00000471350 PDE4DQ08499 809 aa5.3□□□□□ -1.56
COMMD3-209ENST00000471350 C1QTNF2Q9BXJ5 285 aa5.3□□□□□ -1.56
COMMD3-209ENST00000471350 SOBPA7XYQ1 873 aa5.29□□□□□ -1.56
COMMD3-209ENST00000471350 DIXDC1Q155Q3 683 aa5.29□□□□□ -1.56
COMMD3-209ENST00000471350 RTL5Q5HYW3 569 aaPredicted RBP5.29□□□□□ -1.56
COMMD3-209ENST00000471350 ZFAND3Q9H8U3 227 aa5.29□□□□□ -1.56
COMMD3-209ENST00000471350 PLEKHG3A1L390 1219 aa5.28□□□□□ -1.56
COMMD3-209ENST00000471350 CTHP32929 405 aa5.28□□□□□ -1.56
COMMD3-209ENST00000471350 WDR4P57081 412 aaKnown RBP5.28□□□□□ -1.56
COMMD3-209ENST00000471350 SH3BP5LQ7L8J4 393 aa5.28□□□□□ -1.56
COMMD3-209ENST00000471350 ITPKCQ96DU7 683 aa5.28□□□□□ -1.56
COMMD3-209ENST00000471350 PURBQ96QR8 312 aaKnown RBP5.28□□□□□ -1.56
COMMD3-209ENST00000471350 VSIG8P0DPA2 414 aa5.27□□□□□ -1.57
COMMD3-209ENST00000471350 CSPP1Q1MSJ5 1256 aa5.27□□□□□ -1.57
COMMD3-209ENST00000471350 FAM174AQ8TBP5 190 aa5.27□□□□□ -1.57
COMMD3-209ENST00000471350 ZIC2O95409 532 aaPredicted RBP5.26□□□□□ -1.57
COMMD3-209ENST00000471350 TRMT44Q8IYL2 757 aaKnown RBP5.26□□□□□ -1.57
COMMD3-209ENST00000471350 SLC24A3Q9HC58 644 aa5.26□□□□□ -1.57
COMMD3-209ENST00000471350 MEIOBQ8N635 442 aa5.25□□□□□ -1.57
COMMD3-209ENST00000471350 IRF7Q92985 503 aa5.25□□□□□ -1.57
COMMD3-209ENST00000471350 MAP4K5Q9Y4K4 846 aa5.25□□□□□ -1.57
COMMD3-209ENST00000471350 NR5A1Q13285 461 aa5.24□□□□□ -1.57
COMMD3-209ENST00000471350 BPHLQ86WA6 291 aaPredicted RBP5.24□□□□□ -1.57
COMMD3-209ENST00000471350 SLC16A10Q8TF71 515 aa5.24□□□□□ -1.57
COMMD3-209ENST00000471350 OCSTAMPQ9BR26 566 aa5.24□□□□□ -1.57
COMMD3-209ENST00000471350 CLK2P49760 499 aaKnown RBP5.23□□□□□ -1.57
COMMD3-209ENST00000471350 ARID5BQ14865 1188 aa5.23□□□□□ -1.57
COMMD3-209ENST00000471350 ZSCAN1Q8NBB4 408 aa5.23□□□□□ -1.57
COMMD3-209ENST00000471350 SOS2Q07890 1332 aaPredicted RBP5.23□□□□□ -1.57
COMMD3-209ENST00000471350 FSHRP23945 695 aa5.22□□□□□ -1.57
COMMD3-209ENST00000471350 CTDSPL2Q05D32 466 aa5.22□□□□□ -1.57
COMMD3-209ENST00000471350 LINC00528Q8N1L1 170 aa5.22□□□□□ -1.57
COMMD3-209ENST00000471350 DNMT3LQ9UJW3 386 aa5.22□□□□□ -1.57
COMMD3-209ENST00000471350 PPFIA3O75145 1194 aa5.21□□□□□ -1.58
COMMD3-209ENST00000471350 GSK3AP49840 483 aa5.21□□□□□ -1.58
COMMD3-209ENST00000471350 KRT76Q01546 638 aa5.21□□□□□ -1.58
COMMD3-209ENST00000471350 SCARF1Q14162 830 aa5.21□□□□□ -1.58
COMMD3-209ENST00000471350 ERFEQ4G0M1 354 aa5.21□□□□□ -1.58
COMMD3-209ENST00000471350 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.21□□□□□ -1.58
COMMD3-209ENST00000471350 NUTM2BA6NNL0 878 aaPredicted RBP5.2□□□□□ -1.58
COMMD3-209ENST00000471350 NUTM2EB1AL46 878 aaPredicted RBP5.2□□□□□ -1.58
COMMD3-209ENST00000471350 C6orf118Q5T5N4 469 aa5.2□□□□□ -1.58
COMMD3-209ENST00000471350 NUTM2DQ5VT03 806 aaPredicted RBP5.2□□□□□ -1.58
COMMD3-209ENST00000471350 Q6ZVU0 165 aa5.2□□□□□ -1.58
COMMD3-209ENST00000471350 NUTM2AQ8IVF1 878 aaPredicted RBP5.2□□□□□ -1.58
COMMD3-209ENST00000471350 LRRN4Q8WUT4 740 aa5.2□□□□□ -1.58
COMMD3-209ENST00000471350 POLR3EQ9NVU0 708 aa5.2□□□□□ -1.58
COMMD3-209ENST00000471350 LOC100996750A0A140TA64 210 aa5.19□□□□□ -1.58
COMMD3-209ENST00000471350 NBPF14Q5TI25 921 aa5.19□□□□□ -1.58
COMMD3-209ENST00000471350 PPP2R2DQ66LE6 453 aa5.19□□□□□ -1.58
COMMD3-209ENST00000471350 GPR161Q8N6U8 529 aaKnown RBP5.19□□□□□ -1.58
COMMD3-209ENST00000471350 ARMC2Q8NEN0 867 aa5.19□□□□□ -1.58
COMMD3-209ENST00000471350 TSC1Q92574 1164 aa5.19□□□□□ -1.58
COMMD3-209ENST00000471350 GPKOWQ92917 476 aaPredicted RBP eCLIP5.19□□□□□ -1.58
COMMD3-209ENST00000471350 KRTAP4-6Q9BYQ5 205 aa5.19□□□□□ -1.58
COMMD3-209ENST00000471350 AGERQ15109 404 aa5.18□□□□□ -1.58
COMMD3-209ENST00000471350 PPP1R26Q5T8A7 1209 aaPredicted RBP5.18□□□□□ -1.58
COMMD3-209ENST00000471350 VASH1Q7L8A9 365 aaPredicted RBP5.18□□□□□ -1.58
COMMD3-209ENST00000471350 CCDC116Q8IYX3 515 aa5.18□□□□□ -1.58
COMMD3-209ENST00000471350 PROCA1Q8NCQ7 364 aaPredicted RBP5.18□□□□□ -1.58
COMMD3-209ENST00000471350 HELBQ8NG08 1087 aaPredicted RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms