RNA–Protein interactions for RNA: ENST00000471332.1

CHL1-212, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 5

Gene CHL1, Length 399 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-212ENST00000471332 ANKLE2Q86XL3 938 aa9.73□□□□□ -0.85
CHL1-212ENST00000471332 ZNF521Q96K83 1311 aa9.73□□□□□ -0.85
CHL1-212ENST00000471332 AATKQ6ZMQ8 1374 aa9.73□□□□□ -0.85
CHL1-212ENST00000471332 NWD1Q149M9 1564 aa9.72□□□□□ -0.85
CHL1-212ENST00000471332 FYB1O15117 783 aa9.72□□□□□ -0.85
CHL1-212ENST00000471332 FMN2Q9NZ56 1722 aa9.72□□□□□ -0.85
CHL1-212ENST00000471332 CHD2O14647 1828 aaKnown RBP9.72□□□□□ -0.85
CHL1-212ENST00000471332 PNPLA6Q8IY17 1366 aa9.72□□□□□ -0.85
CHL1-212ENST00000471332 NALCNQ8IZF0 1738 aa9.71□□□□□ -0.85
CHL1-212ENST00000471332 PLEKHG3A1L390 1219 aa9.71□□□□□ -0.86
CHL1-212ENST00000471332 MTHFSP49914 203 aa9.71□□□□□ -0.86
CHL1-212ENST00000471332 SLC26A8Q96RN1 970 aa9.71□□□□□ -0.86
CHL1-212ENST00000471332 RNF39Q9H2S5 420 aa9.71□□□□□ -0.86
CHL1-212ENST00000471332 AMOTL2Q9Y2J4 779 aa9.71□□□□□ -0.86
CHL1-212ENST00000471332 NPHP4O75161 1426 aaPredicted RBP9.71□□□□□ -0.86
CHL1-212ENST00000471332 GOLGA2Q08379 1002 aa9.7□□□□□ -0.86
CHL1-212ENST00000471332 RUNDC1Q96C34 613 aa9.7□□□□□ -0.86
CHL1-212ENST00000471332 PNNQ9H307 717 aaKnown RBP9.7□□□□□ -0.86
CHL1-212ENST00000471332 USP6P35125 1406 aa9.7□□□□□ -0.86
CHL1-212ENST00000471332 NKTRP30414 1462 aaKnown RBP9.7□□□□□ -0.86
CHL1-212ENST00000471332 USP54Q70EL1 1684 aa9.7□□□□□ -0.86
CHL1-212ENST00000471332 OVOS2A0A0J9YW53 1432 aa9.69□□□□□ -0.86
CHL1-212ENST00000471332 OVOS2Q6IE36 1432 aa9.69□□□□□ -0.86
CHL1-212ENST00000471332 TTC21AQ8NDW8 1320 aa9.69□□□□□ -0.86
CHL1-212ENST00000471332 GGNBP2Q9H3C7 697 aa9.69□□□□□ -0.86
CHL1-212ENST00000471332 PRR36Q9H6K5 1346 aa9.69□□□□□ -0.86
CHL1-212ENST00000471332 PPP4R2Q9NY27 417 aa9.69□□□□□ -0.86
CHL1-212ENST00000471332 RCAN3Q9UKA8 241 aa9.69□□□□□ -0.86
CHL1-212ENST00000471332 ADGRL3Q9HAR2 1447 aa9.68□□□□□ -0.86
CHL1-212ENST00000471332 E9PSI1 815 aa9.68□□□□□ -0.86
CHL1-212ENST00000471332 TNNT2P45379 298 aaPredicted RBP9.68□□□□□ -0.86
CHL1-212ENST00000471332 CCDC27Q2M243 656 aa9.68□□□□□ -0.86
CHL1-212ENST00000471332 SSH2Q76I76 1423 aa9.67□□□□□ -0.86
CHL1-212ENST00000471332 RRP1P56182 461 aaKnown RBP9.67□□□□□ -0.86
CHL1-212ENST00000471332 COG3Q96JB2 828 aa9.67□□□□□ -0.86
CHL1-212ENST00000471332 APAF1O14727 1248 aa9.66□□□□□ -0.86
CHL1-212ENST00000471332 USP31Q70CQ4 1352 aa9.65□□□□□ -0.86
CHL1-212ENST00000471332 ACEP12821 1306 aa9.65□□□□□ -0.86
CHL1-212ENST00000471332 TTC21BQ7Z4L5 1316 aa9.65□□□□□ -0.86
CHL1-212ENST00000471332 MAPK8IP3Q9UPT6 1336 aa9.65□□□□□ -0.86
CHL1-212ENST00000471332 DIAPH1O60610 1272 aaKnown RBP9.65□□□□□ -0.86
CHL1-212ENST00000471332 U2AF1L5P0DN76 240 aaPredicted RBP9.65□□□□□ -0.86
CHL1-212ENST00000471332 KCNA6P17658 529 aa9.65□□□□□ -0.86
CHL1-212ENST00000471332 U2AF1Q01081 240 aaKnown RBP eCLIP9.65□□□□□ -0.86
CHL1-212ENST00000471332 SLFN5Q08AF3 891 aa9.65□□□□□ -0.86
CHL1-212ENST00000471332 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.65□□□□□ -0.86
CHL1-212ENST00000471332 CCDC146Q8IYE0 955 aa9.65□□□□□ -0.86
CHL1-212ENST00000471332 TRMT2AQ8IZ69 625 aaKnown RBP9.65□□□□□ -0.86
CHL1-212ENST00000471332 KIF24Q5T7B8 1368 aa9.64□□□□□ -0.87
CHL1-212ENST00000471332 SLC4A2P04920 1241 aa9.64□□□□□ -0.87
CHL1-212ENST00000471332 DUSP27Q5VZP5 1158 aa9.64□□□□□ -0.87
CHL1-212ENST00000471332 WDR63Q8IWG1 891 aa9.64□□□□□ -0.87
CHL1-212ENST00000471332 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.64□□□□□ -0.87
CHL1-212ENST00000471332 SALL2Q9Y467 1007 aaPredicted RBP9.64□□□□□ -0.87
CHL1-212ENST00000471332 NME9Q86XW9 330 aa9.63□□□□□ -0.87
CHL1-212ENST00000471332 TCP11L2Q8N4U5 519 aa9.63□□□□□ -0.87
CHL1-212ENST00000471332 CDCA7LQ96GN5 454 aa9.63□□□□□ -0.87
CHL1-212ENST00000471332 POLKQ9UBT6 870 aa9.63□□□□□ -0.87
CHL1-212ENST00000471332 PIK3C2AO00443 1686 aa9.63□□□□□ -0.87
CHL1-212ENST00000471332 KIF1AQ12756 1690 aa9.63□□□□□ -0.87
CHL1-212ENST00000471332 MAP2P11137 1827 aaKnown RBP9.63□□□□□ -0.87
CHL1-212ENST00000471332 IL16Q14005 1332 aa9.62□□□□□ -0.87
CHL1-212ENST00000471332 FCHSD2O94868 740 aa9.62□□□□□ -0.87
CHL1-212ENST00000471332 NEFMP07197 916 aa9.62□□□□□ -0.87
CHL1-212ENST00000471332 WWC1Q8IX03 1113 aa9.62□□□□□ -0.87
CHL1-212ENST00000471332 MYH16Q9H6N6 1097 aa9.62□□□□□ -0.87
CHL1-212ENST00000471332 NCOA3Q9Y6Q9 1424 aa9.62□□□□□ -0.87
CHL1-212ENST00000471332 U2SURPO15042 1029 aaKnown RBP9.61□□□□□ -0.87
CHL1-212ENST00000471332 DCCP43146 1447 aa9.61□□□□□ -0.87
CHL1-212ENST00000471332 CT47B1P0C2W7 299 aaPredicted RBP9.6□□□□□ -0.87
CHL1-212ENST00000471332 IRX6P78412 446 aaPredicted RBP9.6□□□□□ -0.87
CHL1-212ENST00000471332 NGDNQ8NEJ9 315 aaKnown RBP9.6□□□□□ -0.87
CHL1-212ENST00000471332 PLEKHF1Q96S99 279 aa9.6□□□□□ -0.87
CHL1-212ENST00000471332 RTL1A6NKG5 1358 aa9.6□□□□□ -0.87
CHL1-212ENST00000471332 RGPD8O14715 1765 aaPredicted RBP9.6□□□□□ -0.87
CHL1-212ENST00000471332 RGPD1P0DJD0 1748 aa9.59□□□□□ -0.87
CHL1-212ENST00000471332 NCKAP5LQ9HCH0 1330 aa9.59□□□□□ -0.87
CHL1-212ENST00000471332 CALD1Q05682 793 aaKnown RBP9.59□□□□□ -0.87
CHL1-212ENST00000471332 C1QBPQ07021 282 aaKnown RBP9.59□□□□□ -0.87
CHL1-212ENST00000471332 SBNO1A3KN83 1393 aa9.59□□□□□ -0.87
CHL1-212ENST00000471332 FLT4P35916 1363 aa9.59□□□□□ -0.87
CHL1-212ENST00000471332 PHRF1Q9P1Y6 1649 aaKnown RBP9.58□□□□□ -0.88
CHL1-212ENST00000471332 SENP3-EIF4A1A0A087X0R7 540 aa9.58□□□□□ -0.88
CHL1-212ENST00000471332 IL13P35225 146 aa9.58□□□□□ -0.88
CHL1-212ENST00000471332 LMOD3Q0VAK6 560 aa9.58□□□□□ -0.88
CHL1-212ENST00000471332 RSPH6AQ9H0K4 717 aa9.58□□□□□ -0.88
CHL1-212ENST00000471332 MARF1Q9Y4F3 1742 aaKnown RBP9.58□□□□□ -0.88
CHL1-212ENST00000471332 ARHGEF10O15013 1369 aa9.58□□□□□ -0.88
CHL1-212ENST00000471332 PEAK1Q9H792 1746 aa9.57□□□□□ -0.88
CHL1-212ENST00000471332 TMPOP42166 694 aaKnown RBP9.57□□□□□ -0.88
CHL1-212ENST00000471332 EMILIN1Q9Y6C2 1016 aa9.57□□□□□ -0.88
CHL1-212ENST00000471332 PPM1GO15355 546 aaPredicted RBP9.56□□□□□ -0.88
CHL1-212ENST00000471332 CCDC136Q96JN2 1154 aa9.56□□□□□ -0.88
CHL1-212ENST00000471332 PHF8Q9UPP1 1060 aa9.56□□□□□ -0.88
CHL1-212ENST00000471332 MST1RQ04912 1400 aa9.56□□□□□ -0.88
CHL1-212ENST00000471332 PRKAR2BP31323 418 aa9.55□□□□□ -0.88
CHL1-212ENST00000471332 AAMPQ13685 434 aa9.55□□□□□ -0.88
CHL1-212ENST00000471332 NFE2L2Q16236 605 aa9.55□□□□□ -0.88
CHL1-212ENST00000471332 U3KPZ7 1027 aaPredicted RBP9.55□□□□□ -0.88
CHL1-212ENST00000471332 NUTM2FA1L443 756 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms