RNA–Protein interactions for RNA: ENST00000471296.5

GTF2B-204, Transcript of general transcription factor IIB, humanhuman

TSL 3

Gene GTF2B, Length 593 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-204ENST00000471296 NUTM2EB1AL46 878 aaPredicted RBP11.34□□□□□ -0.59
GTF2B-204ENST00000471296 SH3BP2P78314 561 aa11.34□□□□□ -0.59
GTF2B-204ENST00000471296 NUTM2DQ5VT03 806 aaPredicted RBP11.34□□□□□ -0.59
GTF2B-204ENST00000471296 NUTM2AQ8IVF1 878 aaPredicted RBP11.34□□□□□ -0.59
GTF2B-204ENST00000471296 BAP1Q92560 729 aa11.34□□□□□ -0.59
GTF2B-204ENST00000471296 DACH1Q9UI36 760 aa11.34□□□□□ -0.59
GTF2B-204ENST00000471296 PER1O15534 1290 aaPredicted RBP11.33□□□□□ -0.6
GTF2B-204ENST00000471296 LILRB3O75022 631 aa11.33□□□□□ -0.6
GTF2B-204ENST00000471296 AVPP01185 164 aa11.33□□□□□ -0.6
GTF2B-204ENST00000471296 CTHP32929 405 aa11.33□□□□□ -0.6
GTF2B-204ENST00000471296 CLK2P49760 499 aaKnown RBP11.33□□□□□ -0.6
GTF2B-204ENST00000471296 RTL5Q5HYW3 569 aaPredicted RBP11.33□□□□□ -0.6
GTF2B-204ENST00000471296 FAM117AQ9C073 453 aa11.32□□□□□ -0.6
GTF2B-204ENST00000471296 MAP10Q9P2G4 905 aa11.32□□□□□ -0.6
GTF2B-204ENST00000471296 EHBP1Q8NDI1 1231 aa11.31□□□□□ -0.6
GTF2B-204ENST00000471296 EIF4G1Q04637 1599 aaKnown RBP11.31□□□□□ -0.6
GTF2B-204ENST00000471296 TUSC1Q2TAM9 212 aa11.3□□□□□ -0.6
GTF2B-204ENST00000471296 RSPH6AQ9H0K4 717 aa11.3□□□□□ -0.6
GTF2B-204ENST00000471296 ALDH1A1P00352 501 aa11.29□□□□□ -0.6
GTF2B-204ENST00000471296 CRIPAKQ8N1N5 446 aa11.29□□□□□ -0.6
GTF2B-204ENST00000471296 HPS1Q92902 700 aa11.29□□□□□ -0.6
GTF2B-204ENST00000471296 AXIN1O15169 862 aa11.28□□□□□ -0.6
GTF2B-204ENST00000471296 SIAH2O43255 324 aa11.28□□□□□ -0.6
GTF2B-204ENST00000471296 F12P00748 615 aaPredicted RBP11.28□□□□□ -0.6
GTF2B-204ENST00000471296 ZNF511Q8NB15 262 aa11.28□□□□□ -0.6
GTF2B-204ENST00000471296 PLEKHG3A1L390 1219 aa11.26□□□□□ -0.61
GTF2B-204ENST00000471296 FBXO31Q5XUX0 539 aaPredicted RBP11.26□□□□□ -0.61
GTF2B-204ENST00000471296 PROCA1Q8NCQ7 364 aaPredicted RBP11.26□□□□□ -0.61
GTF2B-204ENST00000471296 CTC1Q2NKJ3 1217 aa11.25□□□□□ -0.61
GTF2B-204ENST00000471296 SMCPP49901 116 aaPredicted RBP11.24□□□□□ -0.61
GTF2B-204ENST00000471296 SKIV2LQ15477 1246 aaKnown RBP11.23□□□□□ -0.61
GTF2B-204ENST00000471296 FOXJ1Q92949 421 aa11.23□□□□□ -0.61
GTF2B-204ENST00000471296 DDRGK1Q96HY6 314 aa11.23□□□□□ -0.61
GTF2B-204ENST00000471296 TLL2Q9Y6L7 1015 aa11.23□□□□□ -0.61
GTF2B-204ENST00000471296 SH3D19Q5HYK7 790 aa11.22□□□□□ -0.61
GTF2B-204ENST00000471296 HELBQ8NG08 1087 aaPredicted RBP11.22□□□□□ -0.61
GTF2B-204ENST00000471296 GMPR2Q9P2T1 348 aaKnown RBP11.22□□□□□ -0.61
GTF2B-204ENST00000471296 ATP1B4Q9UN42 357 aaPredicted RBP11.22□□□□□ -0.61
GTF2B-204ENST00000471296 CTDSPL2Q05D32 466 aa11.21□□□□□ -0.61
GTF2B-204ENST00000471296 ZNF775Q96BV0 537 aaPredicted RBP11.21□□□□□ -0.61
GTF2B-204ENST00000471296 CC2D2AQ9P2K1 1620 aa11.2□□□□□ -0.62
GTF2B-204ENST00000471296 BAZ1AQ9NRL2 1556 aaPredicted RBP11.2□□□□□ -0.62
GTF2B-204ENST00000471296 WASF2Q9Y6W5 498 aa11.2□□□□□ -0.62
GTF2B-204ENST00000471296 CECR2Q9BXF3 1484 aa11.19□□□□□ -0.62
GTF2B-204ENST00000471296 VARSP26640 1264 aaKnown RBP11.19□□□□□ -0.62
GTF2B-204ENST00000471296 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.18□□□□□ -0.62
GTF2B-204ENST00000471296 NEUROD2Q15784 382 aa11.17□□□□□ -0.62
GTF2B-204ENST00000471296 C4orf48Q5BLP8 95 aa11.17□□□□□ -0.62
GTF2B-204ENST00000471296 ATP13A2Q9NQ11 1180 aa11.17□□□□□ -0.62
GTF2B-204ENST00000471296 LRRN4Q8WUT4 740 aa11.16□□□□□ -0.62
GTF2B-204ENST00000471296 AGERQ15109 404 aa11.15□□□□□ -0.62
GTF2B-204ENST00000471296 SMARCA4P51532 1647 aa11.14□□□□□ -0.63
GTF2B-204ENST00000471296 C11orf95C9JLR9 678 aaPredicted RBP11.14□□□□□ -0.63
GTF2B-204ENST00000471296 FAM174AQ8TBP5 190 aa11.14□□□□□ -0.63
GTF2B-204ENST00000471296 SMARCA2P51531 1590 aa11.13□□□□□ -0.63
GTF2B-204ENST00000471296 ARID5BQ14865 1188 aa11.13□□□□□ -0.63
GTF2B-204ENST00000471296 TPRNQ4KMQ1 711 aa11.12□□□□□ -0.63
GTF2B-204ENST00000471296 PPP2R2DQ66LE6 453 aa11.12□□□□□ -0.63
GTF2B-204ENST00000471296 IL27Q8NEV9 243 aa11.12□□□□□ -0.63
GTF2B-204ENST00000471296 NCAPD3P42695 1498 aa11.12□□□□□ -0.63
GTF2B-204ENST00000471296 CAPN5O15484 640 aaPredicted RBP11.11□□□□□ -0.63
GTF2B-204ENST00000471296 AP1G2O75843 785 aa11.11□□□□□ -0.63
GTF2B-204ENST00000471296 BMP1P13497 986 aa11.11□□□□□ -0.63
GTF2B-204ENST00000471296 SNRPBP14678 240 aaKnown RBP11.11□□□□□ -0.63
GTF2B-204ENST00000471296 NNTQ13423 1086 aa11.11□□□□□ -0.63
GTF2B-204ENST00000471296 BPHLQ86WA6 291 aaPredicted RBP11.11□□□□□ -0.63
GTF2B-204ENST00000471296 ATAD2BQ9ULI0 1458 aa11.11□□□□□ -0.63
GTF2B-204ENST00000471296 MPNDQ8N594 471 aa11.1□□□□□ -0.63
GTF2B-204ENST00000471296 ARMC2Q8NEN0 867 aa11.1□□□□□ -0.63
GTF2B-204ENST00000471296 BRPF1P55201 1214 aaPredicted RBP11.09□□□□□ -0.63
GTF2B-204ENST00000471296 NR6A1Q15406 480 aa11.09□□□□□ -0.63
GTF2B-204ENST00000471296 MAGEB6P1A0A0J9YX57 407 aa11.08□□□□□ -0.64
GTF2B-204ENST00000471296 ADH1CP00326 375 aa11.08□□□□□ -0.64
GTF2B-204ENST00000471296 NBPF14Q5TI25 921 aa11.08□□□□□ -0.64
GTF2B-204ENST00000471296 SH3BP5LQ7L8J4 393 aa11.08□□□□□ -0.64
GTF2B-204ENST00000471296 SH3RF1Q7Z6J0 888 aa11.08□□□□□ -0.64
GTF2B-204ENST00000471296 CDK15Q96Q40 435 aa11.08□□□□□ -0.64
GTF2B-204ENST00000471296 MROH2BQ7Z745 1585 aa11.07□□□□□ -0.64
GTF2B-204ENST00000471296 TRIM46Q7Z4K8 759 aa11.07□□□□□ -0.64
GTF2B-204ENST00000471296 CARD14Q9BXL6 1004 aa11.07□□□□□ -0.64
GTF2B-204ENST00000471296 HMGXB3Q12766 1538 aa11.07□□□□□ -0.64
GTF2B-204ENST00000471296 PEG3Q9GZU2 1588 aa11.07□□□□□ -0.64
GTF2B-204ENST00000471296 EPS8L1Q8TE68 723 aa11.06□□□□□ -0.64
GTF2B-204ENST00000471296 TRIM47Q96LD4 638 aa11.06□□□□□ -0.64
GTF2B-204ENST00000471296 C1QTNF2Q9BXJ5 285 aa11.06□□□□□ -0.64
GTF2B-204ENST00000471296 NR3C2P08235 984 aa11.05□□□□□ -0.64
GTF2B-204ENST00000471296 RFC5P40937 340 aa11.05□□□□□ -0.64
GTF2B-204ENST00000471296 GRM5P41594 1212 aa11.05□□□□□ -0.64
GTF2B-204ENST00000471296 HMX1Q9NP08 348 aaPredicted RBP11.05□□□□□ -0.64
GTF2B-204ENST00000471296 BAZ1BQ9UIG0 1483 aaKnown RBP11.05□□□□□ -0.64
GTF2B-204ENST00000471296 USP17L8P0C7I0 530 aa11.04□□□□□ -0.64
GTF2B-204ENST00000471296 TIMP2P16035 220 aa11.04□□□□□ -0.64
GTF2B-204ENST00000471296 WDR4P57081 412 aaKnown RBP11.04□□□□□ -0.64
GTF2B-204ENST00000471296 PCMTD1Q96MG8 357 aaPredicted RBP11.04□□□□□ -0.64
GTF2B-204ENST00000471296 SENP2Q9HC62 589 aa11.04□□□□□ -0.64
GTF2B-204ENST00000471296 FKBPLQ9UIM3 349 aa11.04□□□□□ -0.64
GTF2B-204ENST00000471296 KLF16Q9BXK1 252 aaPredicted RBP11.03□□□□□ -0.64
GTF2B-204ENST00000471296 ZFAND3Q9H8U3 227 aa11.02□□□□□ -0.65
GTF2B-204ENST00000471296 GOPCQ9HD26 462 aa11.02□□□□□ -0.65
GTF2B-204ENST00000471296 RSF1Q96T23 1441 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms